RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 WFDC13Q8IUB5 93 aa7.37□□□□□ -1.23
CSPG4P3Y-201ENST00000418188 LINC00474Q9P2X8 69 aa7.36□□□□□ -1.23
CSPG4P3Y-201ENST00000418188 APLNQ9ULZ1 77 aa7.36□□□□□ -1.23
CSPG4P3Y-201ENST00000418188 MP68P56378 58 aa7.34□□□□□ -1.23
CSPG4P3Y-201ENST00000418188 C9orf163Q8N9P6 203 aa7.33□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 IGLV8-61A0A075B6I0 122 aa7.32□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 NBDYA0A0U1RRE5 68 aa7.32□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 CMYA5Q8N3K9 4069 aa7.31□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 NUPR2A6NF83 97 aa7.31□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 MDFIQ99750 246 aa7.31□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 MPLKIPQ8TAP9 179 aa7.3□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 H0Y9J4 135 aa7.3□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 RPL37AP61513 92 aaKnown RBP7.3□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 HUWE1Q7Z6Z7 4374 aaKnown RBP7.28□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 NDUFB1O75438 58 aa7.28□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 CASC2Q6XLA1 102 aa7.28□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 DNAH3Q8TD57 4116 aa7.28□□□□□ -1.24
CSPG4P3Y-201ENST00000418188 FP248Q71RG6 208 aaPredicted RBP7.27□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 TENM2Q9NT68 2774 aa7.27□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 KRTAP11-1Q8IUC1 163 aa7.27□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 SPRR1BP22528 89 aa7.26□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 LINC00208Q96KT6 92 aa7.26□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 IGLV9-49A0A0B4J1Y8 123 aa7.26□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 PRR4Q16378 134 aa7.26□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 LRCOL1A6NCL2 159 aa7.25□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 LCE6AA0A183 80 aa7.25□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 PRR15Q8IV56 129 aa7.25□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 A8MWP4 228 aa7.24□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 H0Y9P7 68 aa7.22□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 FAM229BQ4G0N7 80 aa7.22□□□□□ -1.25
CSPG4P3Y-201ENST00000418188 SRRM2Q9UQ35 2752 aaKnown RBP7.21□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 LINC00336Q6ZUF6 198 aa7.21□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 PANO1I0J062 215 aa7.21□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 CDK2AP2O75956 126 aa7.21□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 ZCCHC13Q8WW36 166 aaKnown RBP7.21□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 C1orf64Q8NEQ6 169 aa7.2□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 ZNF706Q9Y5V0 76 aaPredicted RBP7.2□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 BRK1Q8WUW1 75 aa7.2□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 DNAH1Q9P2D7 4330 aa7.2□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 DNAH10Q8IVF4 4471 aa7.2□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 LINC00472Q9H8W2 130 aa7.19□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 hDV103S1A0JD37 113 aa7.19□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 PRO0628Q9UI54 55 aa7.18□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 COL7A1Q02388 2944 aa7.18□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 SPACA4Q8TDM5 124 aa7.18□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 TRAV22A0A0B4J277 110 aa7.17□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 Q6ZRN7 208 aaPredicted RBP7.17□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 A0A087WTM6 91 aa7.17□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 H3BPC8 53 aa7.17□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 KRTAP29-1A8MX34 341 aaPredicted RBP7.17□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 RTL8CO15255 209 aa7.16□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 NDUFS5O43920 106 aa7.15□□□□□ -1.26
CSPG4P3Y-201ENST00000418188 KRTAP13-1Q8IUC0 172 aa7.14□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 CSMD3Q7Z407 3707 aa7.14□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 LYSTQ99698 3801 aa7.14□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 MOBPQ13875 183 aa7.14□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 CYP4F30PQ9H0H9 118 aa7.14□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 PSORS1C2Q9UIG4 136 aa7.13□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 IGHV6-1A0A0B4J1U7 121 aa7.12□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 IGLV5-52A0A0A0MRZ9 124 aa7.12□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 MMP24-AS1A0A0U1RRL7 71 aa7.11□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 DNAH9Q9NYC9 4486 aa7.1□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 TP53AIP1Q9HCN2 124 aa7.1□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 ZNF861PO60384 105 aa7.1□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 SPANXA2-OT1Q8N9U9 137 aa7.09□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 ANAPC11Q9NYG5 84 aa7.09□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 V9GYY9 64 aa7.09□□□□□ -1.27
CSPG4P3Y-201ENST00000418188 PSPHP1O15172 72 aa7.09□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 C1orf134Q5TEV5 83 aa7.09□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 LINC00483Q53H64 154 aa7.08□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 C8orf17Q9NRJ1 99 aa7.07□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 Q1T7F1 81 aa7.07□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 PCOTHQ58A44 107 aa7.06□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 SPINK6Q6UWN8 80 aa7.06□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 WWC2-AS2Q96NR7 200 aa7.06□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 A0A1B0GVX0 72 aa7.06□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 PLAC8Q9NZF1 115 aa7.06□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 PLECQ15149 4684 aaKnown RBP7.05□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 LY6G6CO95867 125 aa7.05□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 CIRBP-AS1Q8TBR5 109 aa7.04□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 Q96NJ1 140 aa7.03□□□□□ -1.28
CSPG4P3Y-201ENST00000418188 MRPL34Q9BQ48 92 aaKnown RBP7.02□□□□□ -1.29
CSPG4P3Y-201ENST00000418188 Q6ZR54 194 aa7.02□□□□□ -1.29
CSPG4P3Y-201ENST00000418188 IGLV7-43P04211 117 aa7□□□□□ -1.29
CSPG4P3Y-201ENST00000418188 DNAH7Q8WXX0 4024 aa7□□□□□ -1.29
CSPG4P3Y-201ENST00000418188 A8MUN3 132 aa6.99□□□□□ -1.29
CSPG4P3Y-201ENST00000418188 LIMD2Q9BT23 127 aa6.99□□□□□ -1.29
CSPG4P3Y-201ENST00000418188 TGP01266 2768 aa6.99□□□□□ -1.29
CSPG4P3Y-201ENST00000418188 IGLV7-46A0A075B6I9 117 aa6.98□□□□□ -1.29
CSPG4P3Y-201ENST00000418188 COA5Q86WW8 74 aa6.98□□□□□ -1.29
CSPG4P3Y-201ENST00000418188 PRR15LQ9BU68 103 aa6.96□□□□□ -1.29
CSPG4P3Y-201ENST00000418188 C1orf195Q5TG92 126 aa6.96□□□□□ -1.3
CSPG4P3Y-201ENST00000418188 DYNC2H1Q8NCM8 4307 aaKnown RBP6.96□□□□□ -1.3
CSPG4P3Y-201ENST00000418188 CHKB-CPT1BH3BT56 60 aa6.96□□□□□ -1.3
CSPG4P3Y-201ENST00000418188 ASB16-AS1Q495Z4 193 aa6.95□□□□□ -1.3
CSPG4P3Y-201ENST00000418188 CD164Q04900 197 aa6.94□□□□□ -1.3
CSPG4P3Y-201ENST00000418188 SSBP3-AS1Q7Z2R9 100 aa6.94□□□□□ -1.3
CSPG4P3Y-201ENST00000418188 Q8N9P0 234 aaPredicted RBP6.93□□□□□ -1.3
CSPG4P3Y-201ENST00000418188 A0A087X002 238 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms