RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 SCGB1D4Q6XE38 83 aa3.97□□□□□ -1.77
HLA-DPA1-241ENST00000417724 LST1O00453 97 aa3.96□□□□□ -1.78
HLA-DPA1-241ENST00000417724 OCIAD2Q56VL3 154 aa3.96□□□□□ -1.78
HLA-DPA1-241ENST00000417724 IGFL1Q6UW32 110 aa3.96□□□□□ -1.78
HLA-DPA1-241ENST00000417724 SLC7A5P1Q8MH63 180 aa3.96□□□□□ -1.78
HLA-DPA1-241ENST00000417724 SMIM11BQ8TCY0 68 aa3.96□□□□□ -1.78
HLA-DPA1-241ENST00000417724 C20orf166-AS1Q96NR2 134 aa3.96□□□□□ -1.78
HLA-DPA1-241ENST00000417724 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
HLA-DPA1-241ENST00000417724 TTTY13Q9BZ97 58 aa3.96□□□□□ -1.78
HLA-DPA1-241ENST00000417724 FAM236DA0A1B0GTK5 79 aa3.95□□□□□ -1.78
HLA-DPA1-241ENST00000417724 A8MUU9 505 aa3.95□□□□□ -1.78
HLA-DPA1-241ENST00000417724 MT1FP04733 61 aa3.95□□□□□ -1.78
HLA-DPA1-241ENST00000417724 FAM236CP0DP71 79 aa3.95□□□□□ -1.78
HLA-DPA1-241ENST00000417724 LINC01545Q5VT33 79 aa3.95□□□□□ -1.78
HLA-DPA1-241ENST00000417724 Q6ZVH6 145 aa3.95□□□□□ -1.78
HLA-DPA1-241ENST00000417724 PET117Q6UWS5 81 aa3.94□□□□□ -1.78
HLA-DPA1-241ENST00000417724 LINC00575Q6W349 94 aa3.94□□□□□ -1.78
HLA-DPA1-241ENST00000417724 Q6ZQY7 126 aa3.94□□□□□ -1.78
HLA-DPA1-241ENST00000417724 MUSTN1Q8IVN3 82 aa3.94□□□□□ -1.78
HLA-DPA1-241ENST00000417724 hADV29S1A0JD25 119 aa3.93□□□□□ -1.78
HLA-DPA1-241ENST00000417724 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
HLA-DPA1-241ENST00000417724 SNHG12Q9BXW3 62 aa3.92□□□□□ -1.78
HLA-DPA1-241ENST00000417724 RBM12B-AS1Q9P1G2 102 aa3.92□□□□□ -1.78
HLA-DPA1-241ENST00000417724 SS18L2Q9UHA2 77 aa3.92□□□□□ -1.78
HLA-DPA1-241ENST00000417724 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
HLA-DPA1-241ENST00000417724 SCGB1D1O95968 90 aa3.91□□□□□ -1.78
HLA-DPA1-241ENST00000417724 PPDPFLQ8WWR9 84 aa3.91□□□□□ -1.78
HLA-DPA1-241ENST00000417724 KRTAP19-6Q3LI70 58 aa3.9□□□□□ -1.79
HLA-DPA1-241ENST00000417724 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.9□□□□□ -1.79
HLA-DPA1-241ENST00000417724 COLCA2A8K830 154 aa3.88□□□□□ -1.79
HLA-DPA1-241ENST00000417724 KRTAP16-1A8MUX0 517 aa3.88□□□□□ -1.79
HLA-DPA1-241ENST00000417724 H3BUT2 72 aa3.88□□□□□ -1.79
HLA-DPA1-241ENST00000417724 C3orf79P0CE67 100 aa3.88□□□□□ -1.79
HLA-DPA1-241ENST00000417724 ANKRD39Q53RE8 183 aa3.88□□□□□ -1.79
HLA-DPA1-241ENST00000417724 TEN1Q86WV5 123 aa3.88□□□□□ -1.79
HLA-DPA1-241ENST00000417724 MPLKIPQ8TAP9 179 aa3.88□□□□□ -1.79
HLA-DPA1-241ENST00000417724 SMCPP49901 116 aaPredicted RBP3.87□□□□□ -1.79
HLA-DPA1-241ENST00000417724 DSCR10P59022 87 aa3.87□□□□□ -1.79
HLA-DPA1-241ENST00000417724 KRTDAPP60985 99 aa3.87□□□□□ -1.79
HLA-DPA1-241ENST00000417724 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
HLA-DPA1-241ENST00000417724 HIST1H2BKO60814 126 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 HIST1H2BJP06899 126 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 HRES1P13985 223 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 HIST1H2BOP23527 126 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 HIST1H2BBP33778 126 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 HIST1H2BDP58876 126 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 LINC00313P59037 77 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 HIST1H2BCP62807 126 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 HIST2H2BEQ16778 126 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 MTURNQ8N3F0 131 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 HIST1H2BHQ93079 126 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 HIST1H2BNQ99877 126 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 HIST1H2BMQ99879 126 aa3.86□□□□□ -1.79
HLA-DPA1-241ENST00000417724 A0A087WSZ3 146 aa3.85□□□□□ -1.79
HLA-DPA1-241ENST00000417724 BVES-AS1Q5T3Y7 98 aa3.85□□□□□ -1.79
HLA-DPA1-241ENST00000417724 C12orf57Q99622 126 aa3.85□□□□□ -1.79
HLA-DPA1-241ENST00000417724 SNCGO76070 127 aa3.84□□□□□ -1.79
HLA-DPA1-241ENST00000417724 NOTCH2NLQ7Z3S9 236 aa3.84□□□□□ -1.79
HLA-DPA1-241ENST00000417724 NDUFV3P56181 108 aaKnown RBP3.83□□□□□ -1.8
HLA-DPA1-241ENST00000417724 ATOH7Q8N100 152 aa3.83□□□□□ -1.8
HLA-DPA1-241ENST00000417724 SIGMAR1Q99720 223 aa3.83□□□□□ -1.8
HLA-DPA1-241ENST00000417724 SNRPEP62304 92 aaKnown RBP3.82□□□□□ -1.8
HLA-DPA1-241ENST00000417724 A8MWP4 228 aa3.8□□□□□ -1.8
HLA-DPA1-241ENST00000417724 H3BMG7 143 aa3.8□□□□□ -1.8
HLA-DPA1-241ENST00000417724 IGKV4-1P06312 121 aa3.8□□□□□ -1.8
HLA-DPA1-241ENST00000417724 GHRHP01286 108 aa3.79□□□□□ -1.8
HLA-DPA1-241ENST00000417724 COA6Q5JTJ3 125 aaKnown RBP3.79□□□□□ -1.8
HLA-DPA1-241ENST00000417724 H0YGX0 51 aa3.78□□□□□ -1.8
HLA-DPA1-241ENST00000417724 A0A1W2PNM2 257 aa3.77□□□□□ -1.81
HLA-DPA1-241ENST00000417724 FABP2P12104 132 aa3.77□□□□□ -1.81
HLA-DPA1-241ENST00000417724 Q8N9P0 234 aaPredicted RBP3.77□□□□□ -1.81
HLA-DPA1-241ENST00000417724 IGHV6-1A0A0B4J1U7 121 aa3.76□□□□□ -1.81
HLA-DPA1-241ENST00000417724 HSBP1L1C9JCN9 74 aa3.76□□□□□ -1.81
HLA-DPA1-241ENST00000417724 SPINK7P58062 85 aa3.76□□□□□ -1.81
HLA-DPA1-241ENST00000417724 HIST1H4GQ99525 98 aa3.76□□□□□ -1.81
HLA-DPA1-241ENST00000417724 TRBV7-4A0A0J9YYF1 115 aa3.75□□□□□ -1.81
HLA-DPA1-241ENST00000417724 DEFB116Q30KQ4 102 aa3.75□□□□□ -1.81
HLA-DPA1-241ENST00000417724 ANKRD29Q8N6D5 301 aa3.75□□□□□ -1.81
HLA-DPA1-241ENST00000417724 ZCCHC13Q8WW36 166 aaKnown RBP3.74□□□□□ -1.81
HLA-DPA1-241ENST00000417724 FAM218AQ96MZ4 157 aa3.74□□□□□ -1.81
HLA-DPA1-241ENST00000417724 LINC00472Q9H8W2 130 aa3.74□□□□□ -1.81
HLA-DPA1-241ENST00000417724 A0A1B0GX51 115 aa3.73□□□□□ -1.81
HLA-DPA1-241ENST00000417724 C8orf87E5RJ46 101 aa3.73□□□□□ -1.81
HLA-DPA1-241ENST00000417724 RAB37Q96AX2 223 aa3.73□□□□□ -1.81
HLA-DPA1-241ENST00000417724 LOC100996750A0A140TA64 210 aa3.71□□□□□ -1.82
HLA-DPA1-241ENST00000417724 A0A1B0GVX0 72 aa3.71□□□□□ -1.82
HLA-DPA1-241ENST00000417724 WFDC13Q8IUB5 93 aa3.71□□□□□ -1.82
HLA-DPA1-241ENST00000417724 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.82
HLA-DPA1-241ENST00000417724 TRACP01848 142 aa3.7□□□□□ -1.82
HLA-DPA1-241ENST00000417724 NEBP20929 6669 aa3.7□□□□□ -1.82
HLA-DPA1-241ENST00000417724 A0A0B4J2C4 111 aa3.69□□□□□ -1.82
HLA-DPA1-241ENST00000417724 H3BQ85 93 aa3.69□□□□□ -1.82
HLA-DPA1-241ENST00000417724 CCKP06307 115 aa3.69□□□□□ -1.82
HLA-DPA1-241ENST00000417724 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
HLA-DPA1-241ENST00000417724 A0A1B0GV72 72 aa3.68□□□□□ -1.82
HLA-DPA1-241ENST00000417724 S100A2P29034 98 aa3.68□□□□□ -1.82
HLA-DPA1-241ENST00000417724 LYRM7Q5U5X0 104 aa3.68□□□□□ -1.82
HLA-DPA1-241ENST00000417724 TMEM256-PLSCR3K7ERE1 68 aa3.67□□□□□ -1.82
HLA-DPA1-241ENST00000417724 DLEU1O43261 78 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms