RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 REG3GQ6UW15 175 aa8.16□□□□□ -1.1
LRRTM1-205ENST00000417012 LINC00476Q8WZB0 136 aa8.16□□□□□ -1.1
LRRTM1-205ENST00000417012 HCG22E2RYF7 251 aa8.16□□□□□ -1.1
LRRTM1-205ENST00000417012 DNAH10Q8IVF4 4471 aa8.15□□□□□ -1.1
LRRTM1-205ENST00000417012 ZCCHC13Q8WW36 166 aaKnown RBP8.15□□□□□ -1.11
LRRTM1-205ENST00000417012 hDV103S1A0JD37 113 aa8.14□□□□□ -1.11
LRRTM1-205ENST00000417012 PSCAO43653 123 aa8.14□□□□□ -1.11
LRRTM1-205ENST00000417012 TENM2Q9NT68 2774 aa8.13□□□□□ -1.11
LRRTM1-205ENST00000417012 CSMD3Q7Z407 3707 aa8.13□□□□□ -1.11
LRRTM1-205ENST00000417012 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.13□□□□□ -1.11
LRRTM1-205ENST00000417012 PRR15Q8IV56 129 aa8.12□□□□□ -1.11
LRRTM1-205ENST00000417012 C4orf48Q5BLP8 95 aa8.12□□□□□ -1.11
LRRTM1-205ENST00000417012 IGFL1Q6UW32 110 aa8.12□□□□□ -1.11
LRRTM1-205ENST00000417012 C1orf64Q8NEQ6 169 aa8.11□□□□□ -1.11
LRRTM1-205ENST00000417012 DNAH7Q8WXX0 4024 aa8.11□□□□□ -1.11
LRRTM1-205ENST00000417012 A0A0G2JQZ4 141 aa8.11□□□□□ -1.11
LRRTM1-205ENST00000417012 A0A1W2PNN7 141 aa8.11□□□□□ -1.11
LRRTM1-205ENST00000417012 DNAH9Q9NYC9 4486 aa8.1□□□□□ -1.11
LRRTM1-205ENST00000417012 A0A087WSZ3 146 aa8.08□□□□□ -1.12
LRRTM1-205ENST00000417012 PRLHP81277 87 aa8.08□□□□□ -1.12
LRRTM1-205ENST00000417012 DEFB116Q30KQ4 102 aa8.08□□□□□ -1.12
LRRTM1-205ENST00000417012 WFDC13Q8IUB5 93 aa8.08□□□□□ -1.12
LRRTM1-205ENST00000417012 NDUFB1O75438 58 aa8.08□□□□□ -1.12
LRRTM1-205ENST00000417012 MP68P56378 58 aa8.07□□□□□ -1.12
LRRTM1-205ENST00000417012 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
LRRTM1-205ENST00000417012 KRTAP1-5Q9BYS1 174 aa8.06□□□□□ -1.12
LRRTM1-205ENST00000417012 CYP4F30PQ9H0H9 118 aa8.06□□□□□ -1.12
LRRTM1-205ENST00000417012 PRR4Q16378 134 aa8.06□□□□□ -1.12
LRRTM1-205ENST00000417012 MDFIQ99750 246 aa8.06□□□□□ -1.12
LRRTM1-205ENST00000417012 IGLV8-61A0A075B6I0 122 aa8.05□□□□□ -1.12
LRRTM1-205ENST00000417012 IGKV2-24A0A0C4DH68 120 aa8.05□□□□□ -1.12
LRRTM1-205ENST00000417012 Q1T7F1 81 aa8.05□□□□□ -1.12
LRRTM1-205ENST00000417012 RBM12B-AS1Q9P1G2 102 aa8.05□□□□□ -1.12
LRRTM1-205ENST00000417012 A0A096LNI7 61 aa8.05□□□□□ -1.12
LRRTM1-205ENST00000417012 UBE2AP49459 152 aa8.04□□□□□ -1.12
LRRTM1-205ENST00000417012 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
LRRTM1-205ENST00000417012 A8MU10 97 aa8.02□□□□□ -1.13
LRRTM1-205ENST00000417012 RPL37AP61513 92 aaKnown RBP8.02□□□□□ -1.13
LRRTM1-205ENST00000417012 TRAV22A0A0B4J277 110 aa8.01□□□□□ -1.13
LRRTM1-205ENST00000417012 LINC00208Q96KT6 92 aa8.01□□□□□ -1.13
LRRTM1-205ENST00000417012 KRTAP29-1A8MX34 341 aaPredicted RBP8□□□□□ -1.13
LRRTM1-205ENST00000417012 CASC2Q6XLA1 102 aa8□□□□□ -1.13
LRRTM1-205ENST00000417012 UBE2DNLQ8IWF7 75 aa7.99□□□□□ -1.13
LRRTM1-205ENST00000417012 CNBPP62633 177 aaKnown RBP7.99□□□□□ -1.13
LRRTM1-205ENST00000417012 H0Y9P7 68 aa7.98□□□□□ -1.13
LRRTM1-205ENST00000417012 PLECQ15149 4684 aaKnown RBP7.98□□□□□ -1.13
LRRTM1-205ENST00000417012 B9D2Q9BPU9 175 aa7.97□□□□□ -1.13
LRRTM1-205ENST00000417012 A8MUN3 132 aa7.97□□□□□ -1.13
LRRTM1-205ENST00000417012 APLNQ9ULZ1 77 aa7.97□□□□□ -1.13
LRRTM1-205ENST00000417012 H3BPC8 53 aa7.97□□□□□ -1.13
LRRTM1-205ENST00000417012 A8MWP4 228 aa7.96□□□□□ -1.14
LRRTM1-205ENST00000417012 SPRR1BP22528 89 aa7.95□□□□□ -1.14
LRRTM1-205ENST00000417012 PHF5AQ7RTV0 110 aaKnown RBP7.95□□□□□ -1.14
LRRTM1-205ENST00000417012 KTN1-AS1Q86SY8 53 aa7.95□□□□□ -1.14
LRRTM1-205ENST00000417012 SPANXA2-OT1Q8N9U9 137 aa7.95□□□□□ -1.14
LRRTM1-205ENST00000417012 H0Y9J4 135 aa7.94□□□□□ -1.14
LRRTM1-205ENST00000417012 PRKDCP78527 4128 aaKnown RBP7.94□□□□□ -1.14
LRRTM1-205ENST00000417012 DYNC2H1Q8NCM8 4307 aaKnown RBP7.93□□□□□ -1.14
LRRTM1-205ENST00000417012 SRRM2Q9UQ35 2752 aaKnown RBP7.93□□□□□ -1.14
LRRTM1-205ENST00000417012 CHKB-CPT1BH3BT56 60 aa7.93□□□□□ -1.14
LRRTM1-205ENST00000417012 CHTF8P0CG12 524 aa7.93□□□□□ -1.14
LRRTM1-205ENST00000417012 LINC00472Q9H8W2 130 aa7.93□□□□□ -1.14
LRRTM1-205ENST00000417012 C14orf177Q52M58 125 aa7.92□□□□□ -1.14
LRRTM1-205ENST00000417012 KRTAP11-1Q8IUC1 163 aa7.92□□□□□ -1.14
LRRTM1-205ENST00000417012 STARD9Q9P2P6 4700 aa7.92□□□□□ -1.14
LRRTM1-205ENST00000417012 H3BS24 57 aa7.92□□□□□ -1.14
LRRTM1-205ENST00000417012 C9orf163Q8N9P6 203 aa7.86□□□□□ -1.15
LRRTM1-205ENST00000417012 MMP24-AS1A0A0U1RRL7 71 aa7.86□□□□□ -1.15
LRRTM1-205ENST00000417012 KMT2AQ03164 3969 aa7.85□□□□□ -1.15
LRRTM1-205ENST00000417012 LIMD2Q9BT23 127 aa7.85□□□□□ -1.15
LRRTM1-205ENST00000417012 Q5VV11 94 aa7.84□□□□□ -1.15
LRRTM1-205ENST00000417012 NBDYA0A0U1RRE5 68 aa7.84□□□□□ -1.15
LRRTM1-205ENST00000417012 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.16
LRRTM1-205ENST00000417012 MEGF8Q7Z7M0 2845 aa7.83□□□□□ -1.16
LRRTM1-205ENST00000417012 A6NED7 52 aa7.82□□□□□ -1.16
LRRTM1-205ENST00000417012 PRR15LQ9BU68 103 aa7.82□□□□□ -1.16
LRRTM1-205ENST00000417012 PANO1I0J062 215 aa7.82□□□□□ -1.16
LRRTM1-205ENST00000417012 DNHD1Q96M86 4753 aa7.82□□□□□ -1.16
LRRTM1-205ENST00000417012 NUPR2A6NF83 97 aa7.81□□□□□ -1.16
LRRTM1-205ENST00000417012 COA5Q86WW8 74 aa7.8□□□□□ -1.16
LRRTM1-205ENST00000417012 IGLV7-46A0A075B6I9 117 aa7.8□□□□□ -1.16
LRRTM1-205ENST00000417012 IGLV9-49A0A0B4J1Y8 123 aa7.8□□□□□ -1.16
LRRTM1-205ENST00000417012 MOBPQ13875 183 aa7.8□□□□□ -1.16
LRRTM1-205ENST00000417012 Q6ZRN7 208 aaPredicted RBP7.8□□□□□ -1.16
LRRTM1-205ENST00000417012 KRTAP13-1Q8IUC0 172 aa7.8□□□□□ -1.16
LRRTM1-205ENST00000417012 C8orf87E5RJ46 101 aa7.79□□□□□ -1.16
LRRTM1-205ENST00000417012 TP53AIP1Q9HCN2 124 aa7.79□□□□□ -1.16
LRRTM1-205ENST00000417012 NDUFS5O43920 106 aa7.79□□□□□ -1.16
LRRTM1-205ENST00000417012 TGP01266 2768 aa7.78□□□□□ -1.16
LRRTM1-205ENST00000417012 VPS13DQ5THJ4 4388 aa7.78□□□□□ -1.16
LRRTM1-205ENST00000417012 PCOTHQ58A44 107 aa7.78□□□□□ -1.16
LRRTM1-205ENST00000417012 Q96NJ1 140 aa7.77□□□□□ -1.17
LRRTM1-205ENST00000417012 C8orf17Q9NRJ1 99 aa7.76□□□□□ -1.17
LRRTM1-205ENST00000417012 HECTD4Q9Y4D8 3996 aa7.76□□□□□ -1.17
LRRTM1-205ENST00000417012 ASB16-AS1Q495Z4 193 aa7.76□□□□□ -1.17
LRRTM1-205ENST00000417012 DNAH2Q9P225 4427 aa7.74□□□□□ -1.17
LRRTM1-205ENST00000417012 FRAS1Q86XX4 4008 aa7.74□□□□□ -1.17
LRRTM1-205ENST00000417012 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.74□□□□□ -1.17
LRRTM1-205ENST00000417012 CDK2AP2O75956 126 aa7.73□□□□□ -1.17
LRRTM1-205ENST00000417012 Q75L30 129 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms