RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 DEFB105AQ8NG35 78 aa7.84□□□□□ -1.15
PAF1-202ENST00000416728 KRTAP19-2Q3LHN2 52 aa7.84□□□□□ -1.16
PAF1-202ENST00000416728 TEX49A0A1B0GTD5 131 aa7.83□□□□□ -1.16
PAF1-202ENST00000416728 TTTY13Q9BZ97 58 aa7.83□□□□□ -1.16
PAF1-202ENST00000416728 H7C2G1 150 aa7.82□□□□□ -1.16
PAF1-202ENST00000416728 MT1HP80294 61 aa7.82□□□□□ -1.16
PAF1-202ENST00000416728 A6NJY4 79 aa7.81□□□□□ -1.16
PAF1-202ENST00000416728 CRCT1Q9UGL9 99 aa7.81□□□□□ -1.16
PAF1-202ENST00000416728 FSIP2Q5CZC0 6907 aa7.8□□□□□ -1.16
PAF1-202ENST00000416728 TRBV7-6A0A0J9YX20 115 aa7.8□□□□□ -1.16
PAF1-202ENST00000416728 CFC1BP0CG36 223 aa7.79□□□□□ -1.16
PAF1-202ENST00000416728 VAMP3Q15836 100 aa7.79□□□□□ -1.16
PAF1-202ENST00000416728 Q5XG85 94 aa7.79□□□□□ -1.16
PAF1-202ENST00000416728 SCGB1D4Q6XE38 83 aa7.79□□□□□ -1.16
PAF1-202ENST00000416728 A0A1B0GWB2 263 aa7.78□□□□□ -1.16
PAF1-202ENST00000416728 SMIM29Q86T20 159 aa7.78□□□□□ -1.16
PAF1-202ENST00000416728 KRTDAPP60985 99 aa7.77□□□□□ -1.17
PAF1-202ENST00000416728 COPS9Q8WXC6 57 aa7.77□□□□□ -1.17
PAF1-202ENST00000416728 A6NDN8 102 aa7.76□□□□□ -1.17
PAF1-202ENST00000416728 C3orf79P0CE67 100 aa7.76□□□□□ -1.17
PAF1-202ENST00000416728 C1orf195Q5TG92 126 aa7.76□□□□□ -1.17
PAF1-202ENST00000416728 IGLV5-48A0A075B6I7 105 aa7.75□□□□□ -1.17
PAF1-202ENST00000416728 TAX1BP3O14907 124 aa7.75□□□□□ -1.17
PAF1-202ENST00000416728 A0A0G2JQZ4 141 aa7.74□□□□□ -1.17
PAF1-202ENST00000416728 A0A1B0GV72 72 aa7.74□□□□□ -1.17
PAF1-202ENST00000416728 IFITM1P13164 125 aa7.74□□□□□ -1.17
PAF1-202ENST00000416728 A4D1N5 150 aa7.72□□□□□ -1.17
PAF1-202ENST00000416728 RPL37P61927 97 aaKnown RBP7.72□□□□□ -1.17
PAF1-202ENST00000416728 Q6ZVH6 145 aa7.72□□□□□ -1.17
PAF1-202ENST00000416728 GTF2H5Q6ZYL4 71 aa7.72□□□□□ -1.17
PAF1-202ENST00000416728 BVES-AS1Q5T3Y7 98 aa7.71□□□□□ -1.17
PAF1-202ENST00000416728 NHP2Q9NX24 153 aaKnown RBP7.71□□□□□ -1.17
PAF1-202ENST00000416728 MUSTN1Q8IVN3 82 aa7.71□□□□□ -1.18
PAF1-202ENST00000416728 TCL1BO95988 128 aa7.7□□□□□ -1.18
PAF1-202ENST00000416728 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
PAF1-202ENST00000416728 TRAV13-2A0A0B4J235 113 aa7.69□□□□□ -1.18
PAF1-202ENST00000416728 M0R2T5 61 aa7.69□□□□□ -1.18
PAF1-202ENST00000416728 KRTAP10-6P60371 365 aaPredicted RBP7.69□□□□□ -1.18
PAF1-202ENST00000416728 COX6B2Q6YFQ2 88 aa7.69□□□□□ -1.18
PAF1-202ENST00000416728 SMIM11BQ8TCY0 68 aa7.69□□□□□ -1.18
PAF1-202ENST00000416728 ATOH7Q8N100 152 aa7.68□□□□□ -1.18
PAF1-202ENST00000416728 MTURNQ8N3F0 131 aa7.68□□□□□ -1.18
PAF1-202ENST00000416728 F8WEM9 126 aa7.67□□□□□ -1.18
PAF1-202ENST00000416728 PCP2Q8IVA1 136 aa7.67□□□□□ -1.18
PAF1-202ENST00000416728 K7EP34 96 aa7.66□□□□□ -1.18
PAF1-202ENST00000416728 C9orf118A6NHY6 69 aa7.63□□□□□ -1.19
PAF1-202ENST00000416728 J3QR89 54 aa7.62□□□□□ -1.19
PAF1-202ENST00000416728 SIGMAR1Q99720 223 aa7.62□□□□□ -1.19
PAF1-202ENST00000416728 LINC00575Q6W349 94 aa7.61□□□□□ -1.19
PAF1-202ENST00000416728 Q6JHZ5 121 aa7.6□□□□□ -1.19
PAF1-202ENST00000416728 Q6ZQY7 126 aa7.6□□□□□ -1.19
PAF1-202ENST00000416728 CLEC2BQ92478 149 aa7.6□□□□□ -1.19
PAF1-202ENST00000416728 COX8AP10176 69 aa7.59□□□□□ -1.19
PAF1-202ENST00000416728 HSD52Q0P140 79 aa7.59□□□□□ -1.19
PAF1-202ENST00000416728 TRBV7-7A0A0K0K1E9 115 aa7.59□□□□□ -1.2
PAF1-202ENST00000416728 hADV29S1A0JD25 119 aa7.59□□□□□ -1.2
PAF1-202ENST00000416728 IGFL1Q6UW32 110 aa7.58□□□□□ -1.2
PAF1-202ENST00000416728 C2orf91Q6ZV80 131 aa7.57□□□□□ -1.2
PAF1-202ENST00000416728 ATP11AUNQ6ZP68 121 aa7.56□□□□□ -1.2
PAF1-202ENST00000416728 OBSCN-AS1Q96MR7 158 aa7.56□□□□□ -1.2
PAF1-202ENST00000416728 A0A1W2PPM0 123 aa7.55□□□□□ -1.2
PAF1-202ENST00000416728 Q75L30 129 aa7.55□□□□□ -1.2
PAF1-202ENST00000416728 SPCS1Q9Y6A9 102 aa7.55□□□□□ -1.2
PAF1-202ENST00000416728 FABP2P12104 132 aa7.54□□□□□ -1.2
PAF1-202ENST00000416728 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.54□□□□□ -1.2
PAF1-202ENST00000416728 Q6Q795 121 aa7.53□□□□□ -1.2
PAF1-202ENST00000416728 FLGP20930 4061 aaPredicted RBP7.53□□□□□ -1.2
PAF1-202ENST00000416728 H3BUT2 72 aa7.51□□□□□ -1.21
PAF1-202ENST00000416728 PPDPFLQ8WWR9 84 aa7.51□□□□□ -1.21
PAF1-202ENST00000416728 F8W1H4 67 aa7.5□□□□□ -1.21
PAF1-202ENST00000416728 LST1O00453 97 aa7.5□□□□□ -1.21
PAF1-202ENST00000416728 HIGD1BQ9P298 99 aa7.5□□□□□ -1.21
PAF1-202ENST00000416728 Q96NJ1 140 aa7.47□□□□□ -1.21
PAF1-202ENST00000416728 SS18L2Q9UHA2 77 aa7.46□□□□□ -1.21
PAF1-202ENST00000416728 HIST1H4GQ99525 98 aa7.46□□□□□ -1.22
PAF1-202ENST00000416728 C20orf166-AS1Q96NR2 134 aa7.43□□□□□ -1.22
PAF1-202ENST00000416728 SNCGO76070 127 aa7.42□□□□□ -1.22
PAF1-202ENST00000416728 TEN1Q86WV5 123 aa7.41□□□□□ -1.22
PAF1-202ENST00000416728 A8MUU9 505 aa7.4□□□□□ -1.22
PAF1-202ENST00000416728 TRBV20-1A0A075B6N2 111 aa7.39□□□□□ -1.23
PAF1-202ENST00000416728 CFC1P0CG37 223 aa7.39□□□□□ -1.23
PAF1-202ENST00000416728 NDUFV3P56181 108 aaKnown RBP7.39□□□□□ -1.23
PAF1-202ENST00000416728 A0A087WSZ3 146 aa7.38□□□□□ -1.23
PAF1-202ENST00000416728 H3BMG7 143 aa7.38□□□□□ -1.23
PAF1-202ENST00000416728 RAB37Q96AX2 223 aa7.38□□□□□ -1.23
PAF1-202ENST00000416728 PRO0461Q9UI25 63 aa7.38□□□□□ -1.23
PAF1-202ENST00000416728 H0YGX0 51 aa7.37□□□□□ -1.23
PAF1-202ENST00000416728 LYRM7Q5U5X0 104 aa7.36□□□□□ -1.23
PAF1-202ENST00000416728 CEND1Q8N111 149 aa7.36□□□□□ -1.23
PAF1-202ENST00000416728 FXYD2P54710 66 aa7.35□□□□□ -1.23
PAF1-202ENST00000416728 FAM218AQ96MZ4 157 aa7.35□□□□□ -1.23
PAF1-202ENST00000416728 NAA38Q9BRA0 125 aaKnown RBP7.35□□□□□ -1.23
PAF1-202ENST00000416728 ETDBQ3ZM63 59 aa7.34□□□□□ -1.23
PAF1-202ENST00000416728 ANAPC13Q9BS18 74 aa7.34□□□□□ -1.23
PAF1-202ENST00000416728 KRTAP9-8Q9BYQ0 159 aa7.34□□□□□ -1.23
PAF1-202ENST00000416728 A0A0B4J2C4 111 aa7.33□□□□□ -1.24
PAF1-202ENST00000416728 GHRHP01286 108 aa7.33□□□□□ -1.24
PAF1-202ENST00000416728 DSCR10P59022 87 aa7.33□□□□□ -1.24
PAF1-202ENST00000416728 A0A1B0GX51 115 aa7.3□□□□□ -1.24
PAF1-202ENST00000416728 MT-ATP8P03928 68 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms