RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 MT2AP02795 61 aa7.81□□□□□ -1.16
DDX56-202ENST00000415758 OCIAD2Q56VL3 154 aa7.81□□□□□ -1.16
DDX56-202ENST00000415758 LINC00575Q6W349 94 aa7.81□□□□□ -1.16
DDX56-202ENST00000415758 Q96NJ1 140 aa7.81□□□□□ -1.16
DDX56-202ENST00000415758 C20orf166-AS1Q96NR2 134 aa7.81□□□□□ -1.16
DDX56-202ENST00000415758 MACF1Q9UPN3 7388 aaKnown RBP7.8□□□□□ -1.16
DDX56-202ENST00000415758 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
DDX56-202ENST00000415758 TRBV20-1A0A075B6N2 111 aa7.79□□□□□ -1.16
DDX56-202ENST00000415758 LCE2BO14633 110 aa7.79□□□□□ -1.16
DDX56-202ENST00000415758 VAMP3Q15836 100 aa7.79□□□□□ -1.16
DDX56-202ENST00000415758 Q6ZQY7 126 aa7.79□□□□□ -1.16
DDX56-202ENST00000415758 A8MUU9 505 aa7.78□□□□□ -1.16
DDX56-202ENST00000415758 LST1O00453 97 aa7.78□□□□□ -1.16
DDX56-202ENST00000415758 C3orf79P0CE67 100 aa7.78□□□□□ -1.16
DDX56-202ENST00000415758 SYNE2Q8WXH0 6885 aaKnown RBP7.78□□□□□ -1.16
DDX56-202ENST00000415758 hADV29S1A0JD25 119 aa7.77□□□□□ -1.17
DDX56-202ENST00000415758 HIST1H2BKO60814 126 aa7.77□□□□□ -1.17
DDX56-202ENST00000415758 HIST1H2BJP06899 126 aa7.77□□□□□ -1.17
DDX56-202ENST00000415758 HIST1H2BOP23527 126 aa7.77□□□□□ -1.17
DDX56-202ENST00000415758 HIST1H2BBP33778 126 aa7.77□□□□□ -1.17
DDX56-202ENST00000415758 HIST1H2BDP58876 126 aa7.77□□□□□ -1.17
DDX56-202ENST00000415758 HIST1H2BCP62807 126 aa7.77□□□□□ -1.17
DDX56-202ENST00000415758 HIST2H2BEQ16778 126 aa7.77□□□□□ -1.17
DDX56-202ENST00000415758 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.77□□□□□ -1.17
DDX56-202ENST00000415758 HIST1H2BHQ93079 126 aa7.77□□□□□ -1.17
DDX56-202ENST00000415758 HIST1H2BNQ99877 126 aa7.77□□□□□ -1.17
DDX56-202ENST00000415758 HIST1H2BMQ99879 126 aa7.77□□□□□ -1.17
DDX56-202ENST00000415758 ANKRD39Q53RE8 183 aa7.76□□□□□ -1.17
DDX56-202ENST00000415758 KRTAP9-3Q9BYQ3 159 aa7.75□□□□□ -1.17
DDX56-202ENST00000415758 MT1FP04733 61 aa7.74□□□□□ -1.17
DDX56-202ENST00000415758 PPDPFLQ8WWR9 84 aa7.73□□□□□ -1.17
DDX56-202ENST00000415758 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.72□□□□□ -1.17
DDX56-202ENST00000415758 SCGB1D1O95968 90 aa7.7□□□□□ -1.18
DDX56-202ENST00000415758 KRTDAPP60985 99 aa7.7□□□□□ -1.18
DDX56-202ENST00000415758 SS18L2Q9UHA2 77 aa7.7□□□□□ -1.18
DDX56-202ENST00000415758 S100A1P23297 94 aa7.69□□□□□ -1.18
DDX56-202ENST00000415758 SNHG12Q9BXW3 62 aa7.69□□□□□ -1.18
DDX56-202ENST00000415758 H3BUT2 72 aa7.67□□□□□ -1.18
DDX56-202ENST00000415758 KRTAP10-10P60014 251 aa7.67□□□□□ -1.18
DDX56-202ENST00000415758 COA6Q5JTJ3 125 aaKnown RBP7.67□□□□□ -1.18
DDX56-202ENST00000415758 KRTAP16-1A8MUX0 517 aa7.66□□□□□ -1.18
DDX56-202ENST00000415758 ATOH7Q8N100 152 aa7.66□□□□□ -1.18
DDX56-202ENST00000415758 MPLKIPQ8TAP9 179 aa7.66□□□□□ -1.18
DDX56-202ENST00000415758 TEN1Q86WV5 123 aa7.65□□□□□ -1.18
DDX56-202ENST00000415758 FAM236DA0A1B0GTK5 79 aa7.64□□□□□ -1.19
DDX56-202ENST00000415758 FAM236CP0DP71 79 aa7.64□□□□□ -1.19
DDX56-202ENST00000415758 SNRPEP62304 92 aaKnown RBP7.63□□□□□ -1.19
DDX56-202ENST00000415758 BVES-AS1Q5T3Y7 98 aa7.63□□□□□ -1.19
DDX56-202ENST00000415758 RBM12B-AS1Q9P1G2 102 aa7.62□□□□□ -1.19
DDX56-202ENST00000415758 HRES1P13985 223 aa7.61□□□□□ -1.19
DDX56-202ENST00000415758 DSCR10P59022 87 aa7.61□□□□□ -1.19
DDX56-202ENST00000415758 LINC00846Q9NV44 126 aa7.61□□□□□ -1.19
DDX56-202ENST00000415758 A0A087WSZ3 146 aa7.59□□□□□ -1.19
DDX56-202ENST00000415758 KRTAP19-6Q3LI70 58 aa7.59□□□□□ -1.19
DDX56-202ENST00000415758 LINC00313P59037 77 aa7.57□□□□□ -1.2
DDX56-202ENST00000415758 NOTCH2NLQ7Z3S9 236 aa7.56□□□□□ -1.2
DDX56-202ENST00000415758 C12orf57Q99622 126 aa7.56□□□□□ -1.2
DDX56-202ENST00000415758 NDUFV3P56181 108 aaKnown RBP7.55□□□□□ -1.2
DDX56-202ENST00000415758 SNCGO76070 127 aa7.51□□□□□ -1.21
DDX56-202ENST00000415758 SIGMAR1Q99720 223 aa7.51□□□□□ -1.21
DDX56-202ENST00000415758 H3BMG7 143 aa7.5□□□□□ -1.21
DDX56-202ENST00000415758 A0A1W2PNM2 257 aa7.49□□□□□ -1.21
DDX56-202ENST00000415758 H0YGX0 51 aa7.49□□□□□ -1.21
DDX56-202ENST00000415758 IGKV4-1P06312 121 aa7.48□□□□□ -1.21
DDX56-202ENST00000415758 KRTAP6-3Q3LI67 103 aa7.48□□□□□ -1.21
DDX56-202ENST00000415758 MTURNQ8N3F0 131 aa7.48□□□□□ -1.21
DDX56-202ENST00000415758 HSBP1L1C9JCN9 74 aa7.47□□□□□ -1.21
DDX56-202ENST00000415758 FAM218AQ96MZ4 157 aa7.47□□□□□ -1.21
DDX56-202ENST00000415758 HIST1H4GQ99525 98 aa7.47□□□□□ -1.21
DDX56-202ENST00000415758 GHRHP01286 108 aa7.46□□□□□ -1.22
DDX56-202ENST00000415758 TRBV7-4A0A0J9YYF1 115 aa7.43□□□□□ -1.22
DDX56-202ENST00000415758 A0A1B0GX51 115 aa7.43□□□□□ -1.22
DDX56-202ENST00000415758 S100A6P06703 90 aa7.43□□□□□ -1.22
DDX56-202ENST00000415758 LINC00472Q9H8W2 130 aa7.43□□□□□ -1.22
DDX56-202ENST00000415758 FABP2P12104 132 aa7.42□□□□□ -1.22
DDX56-202ENST00000415758 A8MWP4 228 aa7.4□□□□□ -1.22
DDX56-202ENST00000415758 S100A2P29034 98 aa7.4□□□□□ -1.22
DDX56-202ENST00000415758 RAB37Q96AX2 223 aa7.4□□□□□ -1.22
DDX56-202ENST00000415758 HIST1H2BLQ99880 126 aa7.4□□□□□ -1.22
DDX56-202ENST00000415758 IGHV6-1A0A0B4J1U7 121 aa7.39□□□□□ -1.23
DDX56-202ENST00000415758 A0A0B4J2C4 111 aa7.39□□□□□ -1.23
DDX56-202ENST00000415758 ANKRD29Q8N6D5 301 aa7.39□□□□□ -1.23
DDX56-202ENST00000415758 COX8AP10176 69 aa7.38□□□□□ -1.23
DDX56-202ENST00000415758 DEFB116Q30KQ4 102 aa7.38□□□□□ -1.23
DDX56-202ENST00000415758 HIST3H2BBQ8N257 126 aa7.38□□□□□ -1.23
DDX56-202ENST00000415758 DLEU1O43261 78 aa7.37□□□□□ -1.23
DDX56-202ENST00000415758 SPINK7P58062 85 aa7.37□□□□□ -1.23
DDX56-202ENST00000415758 C8orf87E5RJ46 101 aa7.35□□□□□ -1.23
DDX56-202ENST00000415758 ZCCHC13Q8WW36 166 aaKnown RBP7.35□□□□□ -1.23
DDX56-202ENST00000415758 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
DDX56-202ENST00000415758 Q8N9P0 234 aaPredicted RBP7.32□□□□□ -1.24
DDX56-202ENST00000415758 H3BQ85 93 aa7.31□□□□□ -1.24
DDX56-202ENST00000415758 CCKP06307 115 aa7.31□□□□□ -1.24
DDX56-202ENST00000415758 HIGD1BQ9P298 99 aa7.31□□□□□ -1.24
DDX56-202ENST00000415758 NEBP20929 6669 aa7.3□□□□□ -1.24
DDX56-202ENST00000415758 TRACP01848 142 aa7.3□□□□□ -1.24
DDX56-202ENST00000415758 ORMDL1Q9P0S3 153 aa7.29□□□□□ -1.24
DDX56-202ENST00000415758 PRO1854Q9UHT4 67 aa7.29□□□□□ -1.24
DDX56-202ENST00000415758 A0A1B0GV72 72 aa7.27□□□□□ -1.25
DDX56-202ENST00000415758 TMEM256-PLSCR3K7ERE1 68 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms