RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 RPL28P46779 137 aaKnown RBP2.59□□□□□ -1.99
PTPRK-209ENST00000415046 S100A7L2Q5SY68 101 aa2.59□□□□□ -1.99
PTPRK-209ENST00000415046 OR13C6PQ8NH95 151 aa2.59□□□□□ -1.99
PTPRK-209ENST00000415046 LINC00308Q8TCZ7 52 aa2.59□□□□□ -1.99
PTPRK-209ENST00000415046 VAMP8Q9BV40 100 aa2.59□□□□□ -1.99
PTPRK-209ENST00000415046 SPANXB1Q9NS25 103 aaPredicted RBP2.59□□□□□ -1.99
PTPRK-209ENST00000415046 V9GYY9 64 aa2.59□□□□□ -1.99
PTPRK-209ENST00000415046 ETDCA0A1B0GVM5 59 aa2.58□□□□□ -2
PTPRK-209ENST00000415046 ZNF861PO60384 105 aa2.58□□□□□ -2
PTPRK-209ENST00000415046 VAMP3Q15836 100 aa2.58□□□□□ -2
PTPRK-209ENST00000415046 SPATA45Q537H7 98 aa2.58□□□□□ -2
PTPRK-209ENST00000415046 MUSTN1Q8IVN3 82 aa2.58□□□□□ -2
PTPRK-209ENST00000415046 HIGD2AQ9BW72 106 aa2.58□□□□□ -2
PTPRK-209ENST00000415046 SPANXDQ9BXN6 97 aa2.58□□□□□ -2
PTPRK-209ENST00000415046 SPANXCQ9NY87 97 aa2.58□□□□□ -2
PTPRK-209ENST00000415046 HERC1Q15751 4861 aa2.58□□□□□ -2
PTPRK-209ENST00000415046 TNXBP22105 4242 aa2.57□□□□□ -2
PTPRK-209ENST00000415046 LOC107984156A0A0G2JMH3 177 aa2.57□□□□□ -2
PTPRK-209ENST00000415046 TRBV10-2A0A0K0K1G8 114 aa2.57□□□□□ -2
PTPRK-209ENST00000415046 NDUFC2O95298 119 aa2.57□□□□□ -2
PTPRK-209ENST00000415046 MT1HL1P0DM35 61 aa2.57□□□□□ -2
PTPRK-209ENST00000415046 S100A12P80511 92 aa2.57□□□□□ -2
PTPRK-209ENST00000415046 JOSD1Q15040 202 aaPredicted RBP2.57□□□□□ -2
PTPRK-209ENST00000415046 ARL17AQ8IVW1 177 aa2.57□□□□□ -2
PTPRK-209ENST00000415046 C14orf144Q96I85 54 aa2.57□□□□□ -2
PTPRK-209ENST00000415046 TRAV23DV6A0A075B6W5 121 aa2.56□□□□□ -2
PTPRK-209ENST00000415046 IGLV6-57P01721 117 aa2.56□□□□□ -2
PTPRK-209ENST00000415046 COX8AP10176 69 aa2.56□□□□□ -2
PTPRK-209ENST00000415046 IFITM1P13164 125 aa2.56□□□□□ -2
PTPRK-209ENST00000415046 SLC25A34Q6PIV7 304 aa2.56□□□□□ -2
PTPRK-209ENST00000415046 KRTAP13-1Q8IUC0 172 aa2.56□□□□□ -2
PTPRK-209ENST00000415046 LINC00337Q8N6G1 96 aa2.56□□□□□ -2
PTPRK-209ENST00000415046 COPS9Q8WXC6 57 aa2.56□□□□□ -2
PTPRK-209ENST00000415046 LINC01600Q96MT4 127 aa2.56□□□□□ -2
PTPRK-209ENST00000415046 C12orf57Q99622 126 aa2.56□□□□□ -2
PTPRK-209ENST00000415046 KCNQ1DNQ9H478 68 aa2.56□□□□□ -2
PTPRK-209ENST00000415046 A6NDN8 102 aa2.55□□□□□ -2
PTPRK-209ENST00000415046 ZNF73O43830 326 aaPredicted RBP2.55□□□□□ -2
PTPRK-209ENST00000415046 PYY3Q5JQD4 70 aa2.55□□□□□ -2
PTPRK-209ENST00000415046 SMCR5Q8TEV8 140 aa2.55□□□□□ -2
PTPRK-209ENST00000415046 ERC2-IT1O76042 136 aa2.54□□□□□ -2
PTPRK-209ENST00000415046 SPRR1AP35321 89 aa2.54□□□□□ -2
PTPRK-209ENST00000415046 TAL2Q16559 108 aa2.54□□□□□ -2
PTPRK-209ENST00000415046 Q6ZRX8 168 aa2.54□□□□□ -2
PTPRK-209ENST00000415046 C2orf91Q6ZV80 131 aa2.54□□□□□ -2
PTPRK-209ENST00000415046 C3orf22Q8N5N4 141 aa2.54□□□□□ -2
PTPRK-209ENST00000415046 SPRR4Q96PI1 79 aa2.54□□□□□ -2
PTPRK-209ENST00000415046 H7C2G1 150 aa2.53□□□□□ -2
PTPRK-209ENST00000415046 DLEU1O43261 78 aa2.53□□□□□ -2
PTPRK-209ENST00000415046 CRYGAP11844 174 aa2.53□□□□□ -2
PTPRK-209ENST00000415046 COX7BP24311 80 aa2.53□□□□□ -2
PTPRK-209ENST00000415046 HINT1P49773 126 aaPredicted RBP2.53□□□□□ -2
PTPRK-209ENST00000415046 C6orf99Q4VX62 202 aa2.53□□□□□ -2
PTPRK-209ENST00000415046 KRTAP13-2Q52LG2 175 aa2.53□□□□□ -2
PTPRK-209ENST00000415046 Q9BRP9 147 aa2.53□□□□□ -2
PTPRK-209ENST00000415046 PRO1933Q9H354 126 aa2.53□□□□□ -2
PTPRK-209ENST00000415046 CBY1Q9Y3M2 126 aa2.53□□□□□ -2
PTPRK-209ENST00000415046 ZNF706Q9Y5V0 76 aaPredicted RBP2.53□□□□□ -2
PTPRK-209ENST00000415046 TRAV13-2A0A0B4J235 113 aa2.52□□□□□ -2.01
PTPRK-209ENST00000415046 FAM229BQ4G0N7 80 aa2.52□□□□□ -2.01
PTPRK-209ENST00000415046 ST20-AS1Q8NBB2 130 aa2.52□□□□□ -2.01
PTPRK-209ENST00000415046 SMIM11BQ8TCY0 68 aa2.52□□□□□ -2.01
PTPRK-209ENST00000415046 RAB37Q96AX2 223 aa2.52□□□□□ -2.01
PTPRK-209ENST00000415046 HIGD1BQ9P298 99 aa2.52□□□□□ -2.01
PTPRK-209ENST00000415046 FXYD2P54710 66 aa2.51□□□□□ -2.01
PTPRK-209ENST00000415046 ELOF1P60002 83 aaKnown RBP2.51□□□□□ -2.01
PTPRK-209ENST00000415046 C9orf153Q5TBE3 101 aa2.51□□□□□ -2.01
PTPRK-209ENST00000415046 CAMK2N1Q7Z7J9 78 aa2.51□□□□□ -2.01
PTPRK-209ENST00000415046 DEFB105AQ8NG35 78 aa2.51□□□□□ -2.01
PTPRK-209ENST00000415046 UQCR10Q9UDW1 63 aa2.51□□□□□ -2.01
PTPRK-209ENST00000415046 SMIM26A0A096LP01 95 aa2.5□□□□□ -2.01
PTPRK-209ENST00000415046 K7ERJ3 54 aa2.5□□□□□ -2.01
PTPRK-209ENST00000415046 SMIM6P0DI80 62 aa2.5□□□□□ -2.01
PTPRK-209ENST00000415046 HSD52Q0P140 79 aa2.5□□□□□ -2.01
PTPRK-209ENST00000415046 MOBPQ13875 183 aa2.5□□□□□ -2.01
PTPRK-209ENST00000415046 LINC00304Q8N9R0 145 aa2.5□□□□□ -2.01
PTPRK-209ENST00000415046 NHP2Q9NX24 153 aaKnown RBP2.5□□□□□ -2.01
PTPRK-209ENST00000415046 TRBV7-6A0A0J9YX20 115 aa2.49□□□□□ -2.01
PTPRK-209ENST00000415046 LOC105371267A0A1B0GV96 52 aa2.49□□□□□ -2.01
PTPRK-209ENST00000415046 SLC25A20O43772 301 aa2.49□□□□□ -2.01
PTPRK-209ENST00000415046 LINC00483Q53H64 154 aa2.49□□□□□ -2.01
PTPRK-209ENST00000415046 RETNLBQ9BQ08 111 aa2.49□□□□□ -2.01
PTPRK-209ENST00000415046 HMCN2Q8NDA2 5059 aa2.49□□□□□ -2.01
PTPRK-209ENST00000415046 A0A0B4J2C4 111 aa2.48□□□□□ -2.01
PTPRK-209ENST00000415046 Q6ZQY7 126 aa2.48□□□□□ -2.01
PTPRK-209ENST00000415046 PRO1854Q9UHT4 67 aa2.48□□□□□ -2.01
PTPRK-209ENST00000415046 A0A0G2JQZ4 141 aa2.47□□□□□ -2.01
PTPRK-209ENST00000415046 TEX49A0A1B0GTD5 131 aa2.47□□□□□ -2.01
PTPRK-209ENST00000415046 FAM240AA0A1B0GVK7 77 aa2.47□□□□□ -2.01
PTPRK-209ENST00000415046 hADV29S1A0JD25 119 aa2.47□□□□□ -2.01
PTPRK-209ENST00000415046 PSMB2P49721 201 aa2.47□□□□□ -2.01
PTPRK-209ENST00000415046 CTAG1AP78358 180 aa2.47□□□□□ -2.01
PTPRK-209ENST00000415046 BVES-AS1Q5T3Y7 98 aa2.47□□□□□ -2.01
PTPRK-209ENST00000415046 HRCT1Q6UXD1 115 aa2.47□□□□□ -2.01
PTPRK-209ENST00000415046 LINC00575Q6W349 94 aa2.47□□□□□ -2.01
PTPRK-209ENST00000415046 CLEC2BQ92478 149 aa2.47□□□□□ -2.01
PTPRK-209ENST00000415046 LAMTOR3Q9UHA4 124 aa2.47□□□□□ -2.01
PTPRK-209ENST00000415046 F8WEM9 126 aa2.46□□□□□ -2.02
PTPRK-209ENST00000415046 TSTD3H0UI37 97 aa2.46□□□□□ -2.02
PTPRK-209ENST00000415046 SPRR1BP22528 89 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms