RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 SMIM29Q86T20 159 aa8.52□□□□□ -1.05
SF3B1-204ENST00000414963 FAM229BQ4G0N7 80 aa8.51□□□□□ -1.05
SF3B1-204ENST00000414963 PKHD1L1Q86WI1 4243 aa8.5□□□□□ -1.05
SF3B1-204ENST00000414963 F8W1H4 67 aa8.5□□□□□ -1.05
SF3B1-204ENST00000414963 SMCPP49901 116 aaPredicted RBP8.5□□□□□ -1.05
SF3B1-204ENST00000414963 ANKRD29Q8N6D5 301 aa8.5□□□□□ -1.05
SF3B1-204ENST00000414963 NDUFV3P56181 108 aaKnown RBP8.48□□□□□ -1.05
SF3B1-204ENST00000414963 MTURNQ8N3F0 131 aa8.48□□□□□ -1.05
SF3B1-204ENST00000414963 ANAPC11Q9NYG5 84 aa8.48□□□□□ -1.05
SF3B1-204ENST00000414963 LAMTOR3Q9UHA4 124 aa8.48□□□□□ -1.05
SF3B1-204ENST00000414963 HERC2O95714 4834 aa8.48□□□□□ -1.05
SF3B1-204ENST00000414963 C3orf22Q8N5N4 141 aa8.46□□□□□ -1.06
SF3B1-204ENST00000414963 KRTAP4-5Q9BYR2 181 aa8.46□□□□□ -1.06
SF3B1-204ENST00000414963 IGLV8-61A0A075B6I0 122 aa8.45□□□□□ -1.06
SF3B1-204ENST00000414963 CRYGAP11844 174 aa8.44□□□□□ -1.06
SF3B1-204ENST00000414963 OBSCN-AS1Q96MR7 158 aa8.44□□□□□ -1.06
SF3B1-204ENST00000414963 A0A087X002 238 aa8.43□□□□□ -1.06
SF3B1-204ENST00000414963 F8WEM9 126 aa8.43□□□□□ -1.06
SF3B1-204ENST00000414963 JMJD7-PLA2G4BH0Y9G9 81 aa8.42□□□□□ -1.06
SF3B1-204ENST00000414963 KRTAP13-2Q52LG2 175 aa8.41□□□□□ -1.06
SF3B1-204ENST00000414963 IGLV9-49A0A0B4J1Y8 123 aa8.4□□□□□ -1.06
SF3B1-204ENST00000414963 RBM3P98179 157 aaKnown RBP8.4□□□□□ -1.06
SF3B1-204ENST00000414963 SSBP3-AS1Q7Z2R9 100 aa8.4□□□□□ -1.06
SF3B1-204ENST00000414963 Q6JHZ5 121 aa8.39□□□□□ -1.07
SF3B1-204ENST00000414963 PRR26Q8N8Z3 221 aa8.39□□□□□ -1.07
SF3B1-204ENST00000414963 Q8NBF4 154 aa8.39□□□□□ -1.07
SF3B1-204ENST00000414963 MOBPQ13875 183 aa8.38□□□□□ -1.07
SF3B1-204ENST00000414963 TEN1Q86WV5 123 aa8.38□□□□□ -1.07
SF3B1-204ENST00000414963 C9orf153Q5TBE3 101 aa8.37□□□□□ -1.07
SF3B1-204ENST00000414963 TRBV7-4A0A0J9YYF1 115 aa8.36□□□□□ -1.07
SF3B1-204ENST00000414963 OXTP01178 125 aa8.36□□□□□ -1.07
SF3B1-204ENST00000414963 KRTAP10-8P60410 259 aa8.36□□□□□ -1.07
SF3B1-204ENST00000414963 ETDBQ3ZM63 59 aa8.36□□□□□ -1.07
SF3B1-204ENST00000414963 LOC110117498A0A087WWA1 95 aa8.35□□□□□ -1.07
SF3B1-204ENST00000414963 PDE6GP18545 87 aa8.35□□□□□ -1.07
SF3B1-204ENST00000414963 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
SF3B1-204ENST00000414963 TYMSOSQ8TAI1 123 aa8.35□□□□□ -1.07
SF3B1-204ENST00000414963 DSCR8Q96T75 97 aa8.35□□□□□ -1.07
SF3B1-204ENST00000414963 FLG2Q5D862 2391 aaPredicted RBP8.34□□□□□ -1.07
SF3B1-204ENST00000414963 A0A1B0GV72 72 aa8.33□□□□□ -1.08
SF3B1-204ENST00000414963 C21orf62-AS1Q17RA5 79 aa8.33□□□□□ -1.08
SF3B1-204ENST00000414963 C14orf132Q9NPU4 83 aa8.33□□□□□ -1.08
SF3B1-204ENST00000414963 KRTAP29-1A8MX34 341 aaPredicted RBP8.31□□□□□ -1.08
SF3B1-204ENST00000414963 CD164Q04900 197 aa8.31□□□□□ -1.08
SF3B1-204ENST00000414963 Q6Q795 121 aa8.31□□□□□ -1.08
SF3B1-204ENST00000414963 Q6ZQT0 140 aa8.31□□□□□ -1.08
SF3B1-204ENST00000414963 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
SF3B1-204ENST00000414963 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
SF3B1-204ENST00000414963 A0A0G2JQZ4 141 aa8.3□□□□□ -1.08
SF3B1-204ENST00000414963 A0A1W2PNM2 257 aa8.29□□□□□ -1.08
SF3B1-204ENST00000414963 MT1HL1P0DM35 61 aa8.29□□□□□ -1.08
SF3B1-204ENST00000414963 CCKP06307 115 aa8.28□□□□□ -1.08
SF3B1-204ENST00000414963 SPAG11AQ6PDA7 123 aa8.28□□□□□ -1.08
SF3B1-204ENST00000414963 MYCBP2O75592 4640 aa8.28□□□□□ -1.08
SF3B1-204ENST00000414963 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
SF3B1-204ENST00000414963 A0A1B0GW54 56 aa8.27□□□□□ -1.09
SF3B1-204ENST00000414963 LINC00304Q8N9R0 145 aa8.26□□□□□ -1.09
SF3B1-204ENST00000414963 SPINK1P00995 79 aa8.25□□□□□ -1.09
SF3B1-204ENST00000414963 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
SF3B1-204ENST00000414963 TRBV7-7A0A0K0K1E9 115 aa8.24□□□□□ -1.09
SF3B1-204ENST00000414963 TNXBP22105 4242 aa8.24□□□□□ -1.09
SF3B1-204ENST00000414963 RPS29P62273 56 aaKnown RBP8.23□□□□□ -1.09
SF3B1-204ENST00000414963 Q5XG85 94 aa8.22□□□□□ -1.09
SF3B1-204ENST00000414963 HRCT1Q6UXD1 115 aa8.21□□□□□ -1.1
SF3B1-204ENST00000414963 VPS25Q9BRG1 176 aa8.21□□□□□ -1.1
SF3B1-204ENST00000414963 A0A087WSZ3 146 aa8.18□□□□□ -1.1
SF3B1-204ENST00000414963 FAM240AA0A1B0GVK7 77 aa8.17□□□□□ -1.1
SF3B1-204ENST00000414963 ASB16-AS1Q495Z4 193 aa8.17□□□□□ -1.1
SF3B1-204ENST00000414963 LIMD2Q9BT23 127 aa8.17□□□□□ -1.1
SF3B1-204ENST00000414963 J3QR89 54 aa8.16□□□□□ -1.1
SF3B1-204ENST00000414963 ACYP1P07311 99 aa8.16□□□□□ -1.1
SF3B1-204ENST00000414963 SS18L2Q9UHA2 77 aa8.16□□□□□ -1.1
SF3B1-204ENST00000414963 DMBT1Q9UGM3 2413 aaPredicted RBP8.14□□□□□ -1.11
SF3B1-204ENST00000414963 J3QL48 77 aa8.14□□□□□ -1.11
SF3B1-204ENST00000414963 LINC00846Q9NV44 126 aa8.13□□□□□ -1.11
SF3B1-204ENST00000414963 K7ERU9 68 aa8.1□□□□□ -1.11
SF3B1-204ENST00000414963 NREPQ16612 68 aa8.1□□□□□ -1.11
SF3B1-204ENST00000414963 LINC00472Q9H8W2 130 aa8.1□□□□□ -1.11
SF3B1-204ENST00000414963 PCLOQ9Y6V0 5065 aa8.09□□□□□ -1.11
SF3B1-204ENST00000414963 C1orf195Q5TG92 126 aa8.08□□□□□ -1.12
SF3B1-204ENST00000414963 Q6ZVQ6 151 aa8.08□□□□□ -1.12
SF3B1-204ENST00000414963 Q96NJ1 140 aa8.08□□□□□ -1.12
SF3B1-204ENST00000414963 UBL5Q9BZL1 73 aa8.08□□□□□ -1.12
SF3B1-204ENST00000414963 J3KT08 172 aa8.03□□□□□ -1.12
SF3B1-204ENST00000414963 FP248Q71RG6 208 aaPredicted RBP8.01□□□□□ -1.13
SF3B1-204ENST00000414963 CDIP1Q9H305 208 aa8.01□□□□□ -1.13
SF3B1-204ENST00000414963 IGKV4-1P06312 121 aa8□□□□□ -1.13
SF3B1-204ENST00000414963 DEFB116Q30KQ4 102 aa8□□□□□ -1.13
SF3B1-204ENST00000414963 LINC00643Q86TS7 51 aa8□□□□□ -1.13
SF3B1-204ENST00000414963 BPY2O14599 106 aa7.99□□□□□ -1.13
SF3B1-204ENST00000414963 SIGMAR1Q99720 223 aa7.99□□□□□ -1.13
SF3B1-204ENST00000414963 RETNLBQ9BQ08 111 aa7.99□□□□□ -1.13
SF3B1-204ENST00000414963 CXCL6P80162 114 aa7.98□□□□□ -1.13
SF3B1-204ENST00000414963 DSCR10P59022 87 aa7.97□□□□□ -1.13
SF3B1-204ENST00000414963 A8MWP4 228 aa7.96□□□□□ -1.14
SF3B1-204ENST00000414963 ATP5EP2Q5VTU8 51 aa7.96□□□□□ -1.14
SF3B1-204ENST00000414963 IGLV7-46A0A075B6I9 117 aa7.93□□□□□ -1.14
SF3B1-204ENST00000414963 IGKV3D-7A0A0C4DH55 119 aa7.93□□□□□ -1.14
SF3B1-204ENST00000414963 NDUFB1O75438 58 aa7.93□□□□□ -1.14
SF3B1-204ENST00000414963 PRR15Q8IV56 129 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms