RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 IGKV2-29A2NJV5 120 aaPredicted RBP3.46□□□□□ -1.86
LINC00342-201ENST00000412393 LRCOL1A6NCL2 159 aa3.46□□□□□ -1.86
LINC00342-201ENST00000412393 NTM-AS1Q6ZSK4 140 aa3.46□□□□□ -1.86
LINC00342-201ENST00000412393 SND1-IT1Q9HBX3 110 aa3.46□□□□□ -1.86
LINC00342-201ENST00000412393 PCLOQ9Y6V0 5065 aa3.46□□□□□ -1.86
LINC00342-201ENST00000412393 DNAH8Q96JB1 4490 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 TRBV7-6A0A0J9YX20 115 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 PRYO14603 147 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 ERC2-IT1O76042 136 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 COX17Q14061 63 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 PRR15Q8IV56 129 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 Q8N814 137 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 COX7B2Q8TF08 81 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 BRK1Q8WUW1 75 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 RMI2Q96E14 147 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 CYSTM1Q9H1C7 97 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 ORMDL1Q9P0S3 153 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 KLK12Q9UKR0 248 aa3.45□□□□□ -1.86
LINC00342-201ENST00000412393 FAT1Q14517 4588 aa3.44□□□□□ -1.86
LINC00342-201ENST00000412393 IGKV2D-24A0A075B6R9 120 aa3.44□□□□□ -1.86
LINC00342-201ENST00000412393 TRBV6-8A0A0A6YYG3 113 aa3.44□□□□□ -1.86
LINC00342-201ENST00000412393 A0A0U1RRA0 63 aa3.44□□□□□ -1.86
LINC00342-201ENST00000412393 LECT2O14960 151 aa3.44□□□□□ -1.86
LINC00342-201ENST00000412393 XCL1P47992 114 aa3.44□□□□□ -1.86
LINC00342-201ENST00000412393 CXCL6P80162 114 aa3.44□□□□□ -1.86
LINC00342-201ENST00000412393 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
LINC00342-201ENST00000412393 SERTAD4-AS1Q5TG53 156 aa3.44□□□□□ -1.86
LINC00342-201ENST00000412393 Q6ZRU5 148 aa3.44□□□□□ -1.86
LINC00342-201ENST00000412393 MIR7-3HGQ8N6C7 128 aa3.44□□□□□ -1.86
LINC00342-201ENST00000412393 DEFB104AQ8WTQ1 72 aa3.44□□□□□ -1.86
LINC00342-201ENST00000412393 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.43□□□□□ -1.86
LINC00342-201ENST00000412393 A0A0U1RQV1 116 aa3.43□□□□□ -1.86
LINC00342-201ENST00000412393 H7BZZ5 65 aa3.43□□□□□ -1.86
LINC00342-201ENST00000412393 SMR3BP02814 79 aaPredicted RBP3.43□□□□□ -1.86
LINC00342-201ENST00000412393 HAMPP81172 84 aa3.43□□□□□ -1.86
LINC00342-201ENST00000412393 RNASE13Q5GAN3 156 aaKnown RBP3.43□□□□□ -1.86
LINC00342-201ENST00000412393 C9orf129Q5T035 196 aaKnown RBP3.43□□□□□ -1.86
LINC00342-201ENST00000412393 Q5VSD8 79 aa3.43□□□□□ -1.86
LINC00342-201ENST00000412393 FAM19A1Q7Z5A9 133 aa3.43□□□□□ -1.86
LINC00342-201ENST00000412393 C14orf132Q9NPU4 83 aa3.43□□□□□ -1.86
LINC00342-201ENST00000412393 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
LINC00342-201ENST00000412393 Q8IZM0 81 aa3.42□□□□□ -1.86
LINC00342-201ENST00000412393 UBL5Q9BZL1 73 aa3.42□□□□□ -1.86
LINC00342-201ENST00000412393 IGKV3D-7A0A0C4DH55 119 aa3.41□□□□□ -1.86
LINC00342-201ENST00000412393 A0A1B0GW54 56 aa3.41□□□□□ -1.86
LINC00342-201ENST00000412393 ANGP03950 147 aaKnown RBP3.41□□□□□ -1.86
LINC00342-201ENST00000412393 ENHOQ6UWT2 76 aa3.41□□□□□ -1.86
LINC00342-201ENST00000412393 Q6ZQT0 140 aa3.41□□□□□ -1.86
LINC00342-201ENST00000412393 MRPL55Q7Z7F7 128 aaKnown RBP3.41□□□□□ -1.86
LINC00342-201ENST00000412393 VPS13BQ7Z7G8 4022 aa3.41□□□□□ -1.86
LINC00342-201ENST00000412393 NCR3O14931 201 aa3.4□□□□□ -1.87
LINC00342-201ENST00000412393 LINC00158P58513 81 aa3.4□□□□□ -1.87
LINC00342-201ENST00000412393 RBM3P98179 157 aaKnown RBP3.4□□□□□ -1.87
LINC00342-201ENST00000412393 C14orf177Q52M58 125 aa3.4□□□□□ -1.87
LINC00342-201ENST00000412393 CLPSL2Q6UWE3 100 aa3.4□□□□□ -1.87
LINC00342-201ENST00000412393 LINC00575Q6W349 94 aa3.4□□□□□ -1.87
LINC00342-201ENST00000412393 Q6ZSA8 131 aa3.4□□□□□ -1.87
LINC00342-201ENST00000412393 FP248Q71RG6 208 aaPredicted RBP3.4□□□□□ -1.87
LINC00342-201ENST00000412393 C20orf197Q8N268 126 aa3.4□□□□□ -1.87
LINC00342-201ENST00000412393 FLG2Q5D862 2391 aaPredicted RBP3.4□□□□□ -1.87
LINC00342-201ENST00000412393 A0A087WVE0 104 aa3.39□□□□□ -1.87
LINC00342-201ENST00000412393 LINC00269Q8N2A0 174 aa3.39□□□□□ -1.87
LINC00342-201ENST00000412393 PRR34Q9NV39 138 aa3.39□□□□□ -1.87
LINC00342-201ENST00000412393 LINC00959A0A1B0GUT2 108 aa3.38□□□□□ -1.87
LINC00342-201ENST00000412393 UBE2L6O14933 153 aa3.38□□□□□ -1.87
LINC00342-201ENST00000412393 LINC01547P58512 204 aaPredicted RBP3.38□□□□□ -1.87
LINC00342-201ENST00000412393 REG3AQ06141 175 aa3.38□□□□□ -1.87
LINC00342-201ENST00000412393 KIAA0087Q14695 138 aa3.38□□□□□ -1.87
LINC00342-201ENST00000412393 KRTAP26-1Q6PEX3 210 aa3.38□□□□□ -1.87
LINC00342-201ENST00000412393 SCXQ7RTU7 201 aa3.38□□□□□ -1.87
LINC00342-201ENST00000412393 IGLV4-60A0A075B6I1 120 aa3.37□□□□□ -1.87
LINC00342-201ENST00000412393 IGLV10-54A0A075B6I4 117 aa3.37□□□□□ -1.87
LINC00342-201ENST00000412393 TRAV23DV6A0A075B6W5 121 aa3.37□□□□□ -1.87
LINC00342-201ENST00000412393 TRBV7-4A0A0J9YYF1 115 aa3.37□□□□□ -1.87
LINC00342-201ENST00000412393 IGLV6-57P01721 117 aa3.37□□□□□ -1.87
LINC00342-201ENST00000412393 PRR26Q8N8Z3 221 aa3.37□□□□□ -1.87
LINC00342-201ENST00000412393 GVQW2A0A096LPI5 108 aaPredicted RBP3.36□□□□□ -1.87
LINC00342-201ENST00000412393 F8WEM9 126 aa3.36□□□□□ -1.87
LINC00342-201ENST00000412393 CD164L2Q6UWJ8 174 aa3.36□□□□□ -1.87
LINC00342-201ENST00000412393 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.36□□□□□ -1.87
LINC00342-201ENST00000412393 Q6ZVQ6 151 aa3.36□□□□□ -1.87
LINC00342-201ENST00000412393 C9orf163Q8N9P6 203 aa3.36□□□□□ -1.87
LINC00342-201ENST00000412393 CIRBP-AS1Q8TBR5 109 aa3.36□□□□□ -1.87
LINC00342-201ENST00000412393 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
LINC00342-201ENST00000412393 IGKV3OR2-268A0A0C4DH90 116 aa3.35□□□□□ -1.87
LINC00342-201ENST00000412393 VPREB1P12018 145 aa3.35□□□□□ -1.87
LINC00342-201ENST00000412393 DMBT1Q9UGM3 2413 aaPredicted RBP3.35□□□□□ -1.87
LINC00342-201ENST00000412393 SRRM2Q9UQ35 2752 aaKnown RBP3.34□□□□□ -1.87
LINC00342-201ENST00000412393 NDUFS5O43920 106 aa3.34□□□□□ -1.87
LINC00342-201ENST00000412393 CNBPP62633 177 aaKnown RBP3.34□□□□□ -1.87
LINC00342-201ENST00000412393 UBE2BP63146 152 aa3.34□□□□□ -1.87
LINC00342-201ENST00000412393 KTN1-AS1Q86SY8 53 aa3.34□□□□□ -1.87
LINC00342-201ENST00000412393 TOMM7Q9P0U1 55 aa3.34□□□□□ -1.87
LINC00342-201ENST00000412393 PKHD1L1Q86WI1 4243 aa3.33□□□□□ -1.88
LINC00342-201ENST00000412393 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
LINC00342-201ENST00000412393 RPL37AP61513 92 aaKnown RBP3.33□□□□□ -1.88
LINC00342-201ENST00000412393 Q1T7F1 81 aa3.33□□□□□ -1.88
LINC00342-201ENST00000412393 C6orf99Q4VX62 202 aa3.33□□□□□ -1.88
LINC00342-201ENST00000412393 C15orf56Q8N910 161 aa3.33□□□□□ -1.88
LINC00342-201ENST00000412393 CHCHD10Q8WYQ3 142 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms