RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 PRYO14603 147 aa6.23□□□□□ -1.41
LINC01643-201ENST00000412218 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.23□□□□□ -1.41
LINC01643-201ENST00000412218 KRTAP10-8P60410 259 aa6.22□□□□□ -1.41
LINC01643-201ENST00000412218 FAM19A5Q7Z5A7 132 aaPredicted RBP6.22□□□□□ -1.41
LINC01643-201ENST00000412218 KCNQ1DNQ9H478 68 aa6.22□□□□□ -1.41
LINC01643-201ENST00000412218 C21orf62-AS1Q17RA5 79 aa6.21□□□□□ -1.42
LINC01643-201ENST00000412218 C1orf137Q5JT78 98 aa6.21□□□□□ -1.42
LINC01643-201ENST00000412218 KRTAP11-1Q8IUC1 163 aa6.21□□□□□ -1.42
LINC01643-201ENST00000412218 KRTAP7-1Q8IUC3 87 aa6.21□□□□□ -1.42
LINC01643-201ENST00000412218 TNXBP22105 4242 aa6.2□□□□□ -1.42
LINC01643-201ENST00000412218 MT-ATP8P03928 68 aa6.2□□□□□ -1.42
LINC01643-201ENST00000412218 GAGE2AQ6NT46 116 aa6.2□□□□□ -1.42
LINC01643-201ENST00000412218 Q6ZQY7 126 aa6.2□□□□□ -1.42
LINC01643-201ENST00000412218 C14orf132Q9NPU4 83 aa6.2□□□□□ -1.42
LINC01643-201ENST00000412218 IGLV7-43P04211 117 aa6.19□□□□□ -1.42
LINC01643-201ENST00000412218 IGLV1-50A0A075B6I6 118 aa6.18□□□□□ -1.42
LINC01643-201ENST00000412218 Q6Q795 121 aa6.18□□□□□ -1.42
LINC01643-201ENST00000412218 MRPL55Q7Z7F7 128 aaKnown RBP6.18□□□□□ -1.42
LINC01643-201ENST00000412218 DHRS4-AS1Q9P1J3 65 aa6.18□□□□□ -1.42
LINC01643-201ENST00000412218 UBR4Q5T4S7 5183 aa6.18□□□□□ -1.42
LINC01643-201ENST00000412218 ETDCA0A1B0GVM5 59 aa6.17□□□□□ -1.42
LINC01643-201ENST00000412218 CCKP06307 115 aa6.17□□□□□ -1.42
LINC01643-201ENST00000412218 PDE6GP18545 87 aa6.17□□□□□ -1.42
LINC01643-201ENST00000412218 SPRR1AP35321 89 aa6.17□□□□□ -1.42
LINC01643-201ENST00000412218 LINC00643Q86TS7 51 aa6.17□□□□□ -1.42
LINC01643-201ENST00000412218 LAMTOR3Q9UHA4 124 aa6.17□□□□□ -1.42
LINC01643-201ENST00000412218 LOC110117498A0A087WWA1 95 aa6.16□□□□□ -1.42
LINC01643-201ENST00000412218 H0Y9J4 135 aa6.16□□□□□ -1.42
LINC01643-201ENST00000412218 UBE2BP63146 152 aa6.16□□□□□ -1.42
LINC01643-201ENST00000412218 RBM3P98179 157 aaKnown RBP6.16□□□□□ -1.42
LINC01643-201ENST00000412218 Q6ZRX8 168 aa6.15□□□□□ -1.42
LINC01643-201ENST00000412218 TRBV7-7A0A0K0K1E9 115 aa6.14□□□□□ -1.43
LINC01643-201ENST00000412218 B5MCH6 92 aa6.14□□□□□ -1.43
LINC01643-201ENST00000412218 KRTAP4-16G5E9R7 235 aaPredicted RBP6.14□□□□□ -1.43
LINC01643-201ENST00000412218 DSCR8Q96T75 97 aa6.14□□□□□ -1.43
LINC01643-201ENST00000412218 IMUPQ9GZP8 106 aa6.14□□□□□ -1.43
LINC01643-201ENST00000412218 RPL37AP8A6NKH3 93 aa6.13□□□□□ -1.43
LINC01643-201ENST00000412218 A0A1B0GV72 72 aa6.12□□□□□ -1.43
LINC01643-201ENST00000412218 KRTAP1-4P0C5Y4 121 aa6.12□□□□□ -1.43
LINC01643-201ENST00000412218 NDUFV3P56181 108 aaKnown RBP6.12□□□□□ -1.43
LINC01643-201ENST00000412218 Q6ZQT0 140 aa6.12□□□□□ -1.43
LINC01643-201ENST00000412218 PRR26Q8N8Z3 221 aa6.12□□□□□ -1.43
LINC01643-201ENST00000412218 SMCR5Q8TEV8 140 aa6.12□□□□□ -1.43
LINC01643-201ENST00000412218 ATP5EP2Q5VTU8 51 aa6.11□□□□□ -1.43
LINC01643-201ENST00000412218 Q6JHZ5 121 aa6.11□□□□□ -1.43
LINC01643-201ENST00000412218 LINC00846Q9NV44 126 aa6.1□□□□□ -1.43
LINC01643-201ENST00000412218 TRBV7-4A0A0J9YYF1 115 aa6.09□□□□□ -1.43
LINC01643-201ENST00000412218 ZNF861PO60384 105 aa6.09□□□□□ -1.43
LINC01643-201ENST00000412218 Q9BRP9 147 aa6.09□□□□□ -1.43
LINC01643-201ENST00000412218 UBL5Q9BZL1 73 aa6.09□□□□□ -1.43
LINC01643-201ENST00000412218 IGLV5-48A0A075B6I7 105 aa6.08□□□□□ -1.44
LINC01643-201ENST00000412218 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
LINC01643-201ENST00000412218 KRTAP4-6Q9BYQ5 205 aa6.08□□□□□ -1.44
LINC01643-201ENST00000412218 BCE1O60756 84 aa6.07□□□□□ -1.44
LINC01643-201ENST00000412218 LRP2P98164 4655 aa6.07□□□□□ -1.44
LINC01643-201ENST00000412218 FAM19A1Q7Z5A9 133 aa6.06□□□□□ -1.44
LINC01643-201ENST00000412218 Q8N377 158 aa6.06□□□□□ -1.44
LINC01643-201ENST00000412218 LINC01547P58512 204 aaPredicted RBP6.05□□□□□ -1.44
LINC01643-201ENST00000412218 DEFB105AQ8NG35 78 aa6.05□□□□□ -1.44
LINC01643-201ENST00000412218 A0A1B0GW54 56 aa6.04□□□□□ -1.44
LINC01643-201ENST00000412218 ANAPC13Q9BS18 74 aa6.04□□□□□ -1.44
LINC01643-201ENST00000412218 F8WEM9 126 aa6.03□□□□□ -1.44
LINC01643-201ENST00000412218 KRTAP13-1Q8IUC0 172 aa6.03□□□□□ -1.44
LINC01643-201ENST00000412218 ST20-AS1Q8NBB2 130 aa6.02□□□□□ -1.45
LINC01643-201ENST00000412218 A0A087X002 238 aa6.01□□□□□ -1.45
LINC01643-201ENST00000412218 IGKV3D-7A0A0C4DH55 119 aa6.01□□□□□ -1.45
LINC01643-201ENST00000412218 FAM236AA0A1B0GUQ0 79 aa6.01□□□□□ -1.45
LINC01643-201ENST00000412218 FAM236BA0A1B0GV22 79 aa6.01□□□□□ -1.45
LINC01643-201ENST00000412218 ERC2-IT1O76042 136 aa6.01□□□□□ -1.45
LINC01643-201ENST00000412218 UBE2AP49459 152 aa6.01□□□□□ -1.45
LINC01643-201ENST00000412218 PRLHP81277 87 aa6.01□□□□□ -1.45
LINC01643-201ENST00000412218 Q6ZVQ6 151 aa6.01□□□□□ -1.45
LINC01643-201ENST00000412218 HIGD2AQ9BW72 106 aa6□□□□□ -1.45
LINC01643-201ENST00000412218 RNF213Q63HN8 5207 aa6□□□□□ -1.45
LINC01643-201ENST00000412218 CXCL6P80162 114 aa5.99□□□□□ -1.45
LINC01643-201ENST00000412218 ATOX1O00244 68 aa5.98□□□□□ -1.45
LINC01643-201ENST00000412218 CRYGAP11844 174 aa5.98□□□□□ -1.45
LINC01643-201ENST00000412218 SPRR1BP22528 89 aa5.98□□□□□ -1.45
LINC01643-201ENST00000412218 HIST1H4AP62805 103 aaKnown RBP5.98□□□□□ -1.45
LINC01643-201ENST00000412218 Q8NBF4 154 aa5.98□□□□□ -1.45
LINC01643-201ENST00000412218 IGLV8-61A0A075B6I0 122 aa5.97□□□□□ -1.45
LINC01643-201ENST00000412218 C3orf22Q8N5N4 141 aa5.97□□□□□ -1.45
LINC01643-201ENST00000412218 TYMSOSQ8TAI1 123 aa5.97□□□□□ -1.45
LINC01643-201ENST00000412218 ANAPC11Q9NYG5 84 aa5.97□□□□□ -1.45
LINC01643-201ENST00000412218 FAM229BQ4G0N7 80 aa5.96□□□□□ -1.46
LINC01643-201ENST00000412218 KRTAP13-2Q52LG2 175 aa5.96□□□□□ -1.46
LINC01643-201ENST00000412218 SMIM29Q86T20 159 aa5.96□□□□□ -1.46
LINC01643-201ENST00000412218 LPAP08519 4548 aa5.96□□□□□ -1.46
LINC01643-201ENST00000412218 PRR4Q16378 134 aa5.95□□□□□ -1.46
LINC01643-201ENST00000412218 NREPQ16612 68 aa5.95□□□□□ -1.46
LINC01643-201ENST00000412218 SPRR4Q96PI1 79 aa5.95□□□□□ -1.46
LINC01643-201ENST00000412218 A0A1W2PNM2 257 aa5.94□□□□□ -1.46
LINC01643-201ENST00000412218 ZNF706Q9Y5V0 76 aaPredicted RBP5.94□□□□□ -1.46
LINC01643-201ENST00000412218 A0A087WVE0 104 aa5.92□□□□□ -1.46
LINC01643-201ENST00000412218 BPY2O14599 106 aa5.91□□□□□ -1.46
LINC01643-201ENST00000412218 IGFL1Q6UW32 110 aa5.91□□□□□ -1.46
LINC01643-201ENST00000412218 LINC00304Q8N9R0 145 aa5.9□□□□□ -1.46
LINC01643-201ENST00000412218 UQCRQO14949 82 aa5.89□□□□□ -1.47
LINC01643-201ENST00000412218 LINC00483Q53H64 154 aa5.89□□□□□ -1.47
LINC01643-201ENST00000412218 SMIM20Q8N5G0 67 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms