RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 DSCR8Q96T75 97 aa7.12□□□□□ -1.27
SNRNP35-202ENST00000412157 C21orf62-AS1Q17RA5 79 aa7.11□□□□□ -1.27
SNRNP35-202ENST00000412157 HSPG2P98160 4391 aa7.1□□□□□ -1.27
SNRNP35-202ENST00000412157 PDE6GP18545 87 aa7.1□□□□□ -1.27
SNRNP35-202ENST00000412157 GAGE2AQ6NT46 116 aa7.1□□□□□ -1.27
SNRNP35-202ENST00000412157 DNAH5Q8TE73 4624 aa7.1□□□□□ -1.27
SNRNP35-202ENST00000412157 LOC110117498A0A087WWA1 95 aa7.09□□□□□ -1.27
SNRNP35-202ENST00000412157 FAM240AA0A1B0GVK7 77 aa7.09□□□□□ -1.27
SNRNP35-202ENST00000412157 SPRR1BP22528 89 aa7.09□□□□□ -1.27
SNRNP35-202ENST00000412157 C3orf22Q8N5N4 141 aa7.09□□□□□ -1.27
SNRNP35-202ENST00000412157 CCKP06307 115 aa7.08□□□□□ -1.28
SNRNP35-202ENST00000412157 ACYP1P07311 99 aa7.08□□□□□ -1.28
SNRNP35-202ENST00000412157 TRBV7-4A0A0J9YYF1 115 aa7.07□□□□□ -1.28
SNRNP35-202ENST00000412157 Q6ZQT0 140 aa7.07□□□□□ -1.28
SNRNP35-202ENST00000412157 SPRR4Q96PI1 79 aa7.07□□□□□ -1.28
SNRNP35-202ENST00000412157 VPS25Q9BRG1 176 aa7.07□□□□□ -1.28
SNRNP35-202ENST00000412157 DNAH8Q96JB1 4490 aa7.07□□□□□ -1.28
SNRNP35-202ENST00000412157 CDK2AP2O75956 126 aa7.06□□□□□ -1.28
SNRNP35-202ENST00000412157 SMIM29Q86T20 159 aa7.06□□□□□ -1.28
SNRNP35-202ENST00000412157 XGP55808 180 aa7.05□□□□□ -1.28
SNRNP35-202ENST00000412157 RPL37AP61513 92 aaKnown RBP7.05□□□□□ -1.28
SNRNP35-202ENST00000412157 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
SNRNP35-202ENST00000412157 LINC00483Q53H64 154 aa7.03□□□□□ -1.28
SNRNP35-202ENST00000412157 Q6JHZ5 121 aa7.02□□□□□ -1.29
SNRNP35-202ENST00000412157 Q8N1X5 172 aa7.02□□□□□ -1.29
SNRNP35-202ENST00000412157 IGLV8-61A0A075B6I0 122 aa7.01□□□□□ -1.29
SNRNP35-202ENST00000412157 C9orf153Q5TBE3 101 aa7.01□□□□□ -1.29
SNRNP35-202ENST00000412157 IGLV9-49A0A0B4J1Y8 123 aa7□□□□□ -1.29
SNRNP35-202ENST00000412157 SMR3BP02814 79 aaPredicted RBP7□□□□□ -1.29
SNRNP35-202ENST00000412157 CDIP1Q9H305 208 aa7□□□□□ -1.29
SNRNP35-202ENST00000412157 IGFL1Q6UW32 110 aa6.99□□□□□ -1.29
SNRNP35-202ENST00000412157 Q8NBF4 154 aa6.99□□□□□ -1.29
SNRNP35-202ENST00000412157 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
SNRNP35-202ENST00000412157 HERC1Q15751 4861 aa6.98□□□□□ -1.29
SNRNP35-202ENST00000412157 UBL5Q9BZL1 73 aa6.98□□□□□ -1.29
SNRNP35-202ENST00000412157 LINC00846Q9NV44 126 aa6.98□□□□□ -1.29
SNRNP35-202ENST00000412157 A0A1B0GW54 56 aa6.97□□□□□ -1.29
SNRNP35-202ENST00000412157 A0A1W2PNM2 257 aa6.96□□□□□ -1.3
SNRNP35-202ENST00000412157 MOBPQ13875 183 aa6.96□□□□□ -1.3
SNRNP35-202ENST00000412157 SPINK6Q6UWN8 80 aa6.96□□□□□ -1.3
SNRNP35-202ENST00000412157 LINC00643Q86TS7 51 aa6.95□□□□□ -1.3
SNRNP35-202ENST00000412157 ANAPC11Q9NYG5 84 aa6.95□□□□□ -1.3
SNRNP35-202ENST00000412157 PLA2G1BP04054 148 aaKnown RBP6.94□□□□□ -1.3
SNRNP35-202ENST00000412157 FAM229BQ4G0N7 80 aa6.94□□□□□ -1.3
SNRNP35-202ENST00000412157 SIGMAR1Q99720 223 aa6.94□□□□□ -1.3
SNRNP35-202ENST00000412157 FAM229AH3BQW9 127 aa6.93□□□□□ -1.3
SNRNP35-202ENST00000412157 A0A0G2JQZ4 141 aa6.92□□□□□ -1.3
SNRNP35-202ENST00000412157 CRYGAP11844 174 aa6.92□□□□□ -1.3
SNRNP35-202ENST00000412157 Q6Q795 121 aa6.92□□□□□ -1.3
SNRNP35-202ENST00000412157 DMBT1Q9UGM3 2413 aaPredicted RBP6.91□□□□□ -1.3
SNRNP35-202ENST00000412157 MT-ATP8P03928 68 aa6.91□□□□□ -1.3
SNRNP35-202ENST00000412157 ATP5EP2Q5VTU8 51 aa6.91□□□□□ -1.3
SNRNP35-202ENST00000412157 Q6ZVQ6 151 aa6.91□□□□□ -1.3
SNRNP35-202ENST00000412157 NREPQ16612 68 aa6.9□□□□□ -1.3
SNRNP35-202ENST00000412157 SSBP3-AS1Q7Z2R9 100 aa6.9□□□□□ -1.3
SNRNP35-202ENST00000412157 TRBV7-7A0A0K0K1E9 115 aa6.89□□□□□ -1.31
SNRNP35-202ENST00000412157 A0A087WSZ3 146 aa6.88□□□□□ -1.31
SNRNP35-202ENST00000412157 KRTAP1-4P0C5Y4 121 aa6.88□□□□□ -1.31
SNRNP35-202ENST00000412157 KRTAP10-4P60372 401 aaPredicted RBP6.88□□□□□ -1.31
SNRNP35-202ENST00000412157 Q5VSD8 79 aa6.88□□□□□ -1.31
SNRNP35-202ENST00000412157 A0A087X002 238 aa6.87□□□□□ -1.31
SNRNP35-202ENST00000412157 IGKV3D-7A0A0C4DH55 119 aa6.87□□□□□ -1.31
SNRNP35-202ENST00000412157 HRCT1Q6UXD1 115 aa6.86□□□□□ -1.31
SNRNP35-202ENST00000412157 SRRM2Q9UQ35 2752 aaKnown RBP6.86□□□□□ -1.31
SNRNP35-202ENST00000412157 KRTAP13-2Q52LG2 175 aa6.85□□□□□ -1.31
SNRNP35-202ENST00000412157 SS18L2Q9UHA2 77 aa6.85□□□□□ -1.31
SNRNP35-202ENST00000412157 BPY2O14599 106 aa6.84□□□□□ -1.31
SNRNP35-202ENST00000412157 CXCL6P80162 114 aa6.84□□□□□ -1.31
SNRNP35-202ENST00000412157 CD164Q04900 197 aa6.84□□□□□ -1.31
SNRNP35-202ENST00000412157 TYMSOSQ8TAI1 123 aa6.84□□□□□ -1.31
SNRNP35-202ENST00000412157 J3QL48 77 aa6.83□□□□□ -1.32
SNRNP35-202ENST00000412157 IMUPQ9GZP8 106 aa6.83□□□□□ -1.32
SNRNP35-202ENST00000412157 FAT1Q14517 4588 aa6.82□□□□□ -1.32
SNRNP35-202ENST00000412157 MYCBP2O75592 4640 aa6.8□□□□□ -1.32
SNRNP35-202ENST00000412157 HIST1H4AP62805 103 aaKnown RBP6.8□□□□□ -1.32
SNRNP35-202ENST00000412157 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
SNRNP35-202ENST00000412157 PRR26Q8N8Z3 221 aa6.8□□□□□ -1.32
SNRNP35-202ENST00000412157 FLG2Q5D862 2391 aaPredicted RBP6.79□□□□□ -1.32
SNRNP35-202ENST00000412157 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
SNRNP35-202ENST00000412157 SCGB1A1P11684 91 aa6.78□□□□□ -1.32
SNRNP35-202ENST00000412157 J3KT08 172 aa6.77□□□□□ -1.33
SNRNP35-202ENST00000412157 LIMD2Q9BT23 127 aa6.77□□□□□ -1.33
SNRNP35-202ENST00000412157 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
SNRNP35-202ENST00000412157 DEFB116Q30KQ4 102 aa6.75□□□□□ -1.33
SNRNP35-202ENST00000412157 SPAG11AQ6PDA7 123 aa6.75□□□□□ -1.33
SNRNP35-202ENST00000412157 SVIPQ8NHG7 77 aa6.75□□□□□ -1.33
SNRNP35-202ENST00000412157 LINC00472Q9H8W2 130 aa6.75□□□□□ -1.33
SNRNP35-202ENST00000412157 A0A087WVE0 104 aa6.73□□□□□ -1.33
SNRNP35-202ENST00000412157 FAM236AA0A1B0GUQ0 79 aa6.73□□□□□ -1.33
SNRNP35-202ENST00000412157 FAM236BA0A1B0GV22 79 aa6.73□□□□□ -1.33
SNRNP35-202ENST00000412157 SPINK1P00995 79 aa6.73□□□□□ -1.33
SNRNP35-202ENST00000412157 IGKV4-1P06312 121 aa6.73□□□□□ -1.33
SNRNP35-202ENST00000412157 DSCR10P59022 87 aa6.73□□□□□ -1.33
SNRNP35-202ENST00000412157 ASB16-AS1Q495Z4 193 aa6.73□□□□□ -1.33
SNRNP35-202ENST00000412157 Q8N9L7 120 aa6.73□□□□□ -1.33
SNRNP35-202ENST00000412157 Q5XG85 94 aa6.72□□□□□ -1.33
SNRNP35-202ENST00000412157 Q96NJ1 140 aa6.72□□□□□ -1.33
SNRNP35-202ENST00000412157 K7EQZ3 153 aa6.71□□□□□ -1.34
SNRNP35-202ENST00000412157 NDUFB1O75438 58 aa6.71□□□□□ -1.34
SNRNP35-202ENST00000412157 RPS29P62273 56 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms