RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 TEP1Q99973 2627 aaKnown RBP-0.45□□□□□ -2.48
HDAC9-205ENST00000411993 PLXNC1O60486 1568 aa-0.45□□□□□ -2.48
HDAC9-205ENST00000411993 DNHD1Q96M86 4753 aa-0.45□□□□□ -2.48
HDAC9-205ENST00000411993 MAP3K4Q9Y6R4 1608 aa-0.46□□□□□ -2.48
HDAC9-205ENST00000411993 ANKRD50Q9ULJ7 1429 aa-0.46□□□□□ -2.48
HDAC9-205ENST00000411993 ZNF831Q5JPB2 1677 aa-0.46□□□□□ -2.48
HDAC9-205ENST00000411993 KANTRA0A1W2PQU2 76 aa-0.46□□□□□ -2.48
HDAC9-205ENST00000411993 UMAD1C9J7I0 102 aa-0.46□□□□□ -2.48
HDAC9-205ENST00000411993 LAMA5O15230 3695 aa-0.46□□□□□ -2.48
HDAC9-205ENST00000411993 TACC2O95359 2948 aa-0.46□□□□□ -2.48
HDAC9-205ENST00000411993 PPLO60437 1756 aa-0.47□□□□□ -2.48
HDAC9-205ENST00000411993 MAGI3Q5TCQ9 1506 aa-0.47□□□□□ -2.48
HDAC9-205ENST00000411993 PKD1P98161 4303 aa-0.47□□□□□ -2.48
HDAC9-205ENST00000411993 PIK3C2BO00750 1634 aa-0.47□□□□□ -2.48
HDAC9-205ENST00000411993 ANKRD11Q6UB99 2663 aaPredicted RBP-0.47□□□□□ -2.48
HDAC9-205ENST00000411993 WIZO95785 1651 aa-0.47□□□□□ -2.48
HDAC9-205ENST00000411993 ARFGEF2Q9Y6D5 1785 aa-0.47□□□□□ -2.49
HDAC9-205ENST00000411993 DIP2BQ9P265 1576 aa-0.48□□□□□ -2.49
HDAC9-205ENST00000411993 DEPDC5O75140 1603 aa-0.48□□□□□ -2.49
HDAC9-205ENST00000411993 LCE6AA0A183 80 aa-0.48□□□□□ -2.49
HDAC9-205ENST00000411993 H0YAA0 97 aa-0.48□□□□□ -2.49
HDAC9-205ENST00000411993 LAMA2P24043 3122 aaKnown RBP-0.48□□□□□ -2.49
HDAC9-205ENST00000411993 UACAQ9BZF9 1416 aa-0.48□□□□□ -2.49
HDAC9-205ENST00000411993 BIRC6Q9NR09 4857 aa-0.48□□□□□ -2.49
HDAC9-205ENST00000411993 USP9YO00507 2555 aaPredicted RBP-0.49□□□□□ -2.49
HDAC9-205ENST00000411993 MTORP42345 2549 aa-0.49□□□□□ -2.49
HDAC9-205ENST00000411993 NDUFA4O00483 81 aa-0.49□□□□□ -2.49
HDAC9-205ENST00000411993 IFI6P09912 130 aa-0.49□□□□□ -2.49
HDAC9-205ENST00000411993 NREPQ16612 68 aa-0.49□□□□□ -2.49
HDAC9-205ENST00000411993 TDRG1Q3Y452 100 aa-0.49□□□□□ -2.49
HDAC9-205ENST00000411993 ATP5EP2Q5VTU8 51 aa-0.49□□□□□ -2.49
HDAC9-205ENST00000411993 ITPR3Q14573 2671 aa-0.49□□□□□ -2.49
HDAC9-205ENST00000411993 GCN1Q92616 2671 aaKnown RBP-0.49□□□□□ -2.49
HDAC9-205ENST00000411993 CCDC88BA6NC98 1476 aa-0.49□□□□□ -2.49
HDAC9-205ENST00000411993 DDX60LQ5H9U9 1706 aaKnown RBP-0.5□□□□□ -2.49
HDAC9-205ENST00000411993 A0A087WXM4 84 aa-0.5□□□□□ -2.49
HDAC9-205ENST00000411993 LYNX1G3V0Z9 82 aa-0.5□□□□□ -2.49
HDAC9-205ENST00000411993 DEFB130BP0DP73 79 aa-0.5□□□□□ -2.49
HDAC9-205ENST00000411993 DEFB130AP0DP74 79 aa-0.5□□□□□ -2.49
HDAC9-205ENST00000411993 PRLHP81277 87 aa-0.5□□□□□ -2.49
HDAC9-205ENST00000411993 MYO18BQ8IUG5 2567 aa-0.5□□□□□ -2.49
HDAC9-205ENST00000411993 DSPP15924 2871 aaKnown RBP-0.51□□□□□ -2.49
HDAC9-205ENST00000411993 DMXL1Q9Y485 3027 aa-0.51□□□□□ -2.49
HDAC9-205ENST00000411993 IAPPP10997 89 aa-0.51□□□□□ -2.49
HDAC9-205ENST00000411993 MAP3K1Q13233 1512 aa-0.51□□□□□ -2.49
HDAC9-205ENST00000411993 PLCH1Q4KWH8 1693 aa-0.51□□□□□ -2.49
HDAC9-205ENST00000411993 LRRK2Q5S007 2527 aa-0.52□□□□□ -2.49
HDAC9-205ENST00000411993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.52□□□□□ -2.49
HDAC9-205ENST00000411993 ZZEF1O43149 2961 aa-0.52□□□□□ -2.49
HDAC9-205ENST00000411993 SMIM13P0DJ93 91 aa-0.52□□□□□ -2.49
HDAC9-205ENST00000411993 ADIRFQ15847 76 aa-0.52□□□□□ -2.49
HDAC9-205ENST00000411993 ST20Q9HBF5 79 aa-0.52□□□□□ -2.49
HDAC9-205ENST00000411993 S4R3F8 94 aa-0.52□□□□□ -2.49
HDAC9-205ENST00000411993 CFAP43Q8NDM7 1665 aa-0.53□□□□□ -2.49
HDAC9-205ENST00000411993 CEP290O15078 2479 aa-0.53□□□□□ -2.49
HDAC9-205ENST00000411993 ACACAQ13085 2346 aa-0.53□□□□□ -2.49
HDAC9-205ENST00000411993 LYSTQ99698 3801 aa-0.53□□□□□ -2.49
HDAC9-205ENST00000411993 GNG2P59768 71 aa-0.53□□□□□ -2.49
HDAC9-205ENST00000411993 DEFB106AQ8N104 65 aa-0.53□□□□□ -2.49
HDAC9-205ENST00000411993 S100A13Q99584 98 aa-0.53□□□□□ -2.49
HDAC9-205ENST00000411993 MGAM2Q2M2H8 2515 aa-0.53□□□□□ -2.49
HDAC9-205ENST00000411993 RICTORQ6R327 1708 aa-0.53□□□□□ -2.49
HDAC9-205ENST00000411993 DNAH9Q9NYC9 4486 aa-0.53□□□□□ -2.49
HDAC9-205ENST00000411993 UTP20O75691 2785 aaKnown RBP-0.53□□□□□ -2.49
HDAC9-205ENST00000411993 ITSN1Q15811 1721 aa-0.54□□□□□ -2.5
HDAC9-205ENST00000411993 H3BUT2 72 aa-0.54□□□□□ -2.5
HDAC9-205ENST00000411993 MRPL33O75394 65 aaKnown RBP-0.54□□□□□ -2.5
HDAC9-205ENST00000411993 HMGA1P17096 107 aaKnown RBP-0.54□□□□□ -2.5
HDAC9-205ENST00000411993 DEFB121Q5J5C9 76 aa-0.54□□□□□ -2.5
HDAC9-205ENST00000411993 DNAH6Q9C0G6 4158 aa-0.54□□□□□ -2.5
HDAC9-205ENST00000411993 HTTP42858 3142 aa-0.54□□□□□ -2.5
HDAC9-205ENST00000411993 NBPF19A0A087WUL8 3843 aa-0.54□□□□□ -2.5
HDAC9-205ENST00000411993 CELSR3Q9NYQ7 3312 aa-0.54□□□□□ -2.5
HDAC9-205ENST00000411993 PKD1L2Q7Z442 2459 aa-0.55□□□□□ -2.5
HDAC9-205ENST00000411993 DEFB131BA0A096LNP1 70 aa-0.55□□□□□ -2.5
HDAC9-205ENST00000411993 DEFB110Q30KQ9 67 aa-0.55□□□□□ -2.5
HDAC9-205ENST00000411993 THOC2Q8NI27 1593 aaKnown RBP-0.55□□□□□ -2.5
HDAC9-205ENST00000411993 DOPEY1Q5JWR5 2465 aa-0.55□□□□□ -2.5
HDAC9-205ENST00000411993 NBEAL2Q6ZNJ1 2754 aa-0.55□□□□□ -2.5
HDAC9-205ENST00000411993 KDM5DQ9BY66 1539 aa-0.55□□□□□ -2.5
HDAC9-205ENST00000411993 FAM186AA6NE01 2351 aa-0.56□□□□□ -2.5
HDAC9-205ENST00000411993 CUBNO60494 3623 aa-0.56□□□□□ -2.5
HDAC9-205ENST00000411993 HFM1A2PYH4 1435 aa-0.56□□□□□ -2.5
HDAC9-205ENST00000411993 CCDC168Q8NDH2 2452 aa-0.57□□□□□ -2.5
HDAC9-205ENST00000411993 LAMA1P25391 3075 aa-0.57□□□□□ -2.5
HDAC9-205ENST00000411993 ABCC1P33527 1531 aa-0.57□□□□□ -2.5
HDAC9-205ENST00000411993 DCAF1Q9Y4B6 1507 aa-0.57□□□□□ -2.5
HDAC9-205ENST00000411993 UBL5Q9BZL1 73 aa-0.57□□□□□ -2.5
HDAC9-205ENST00000411993 RALGAPBQ86X10 1494 aa-0.57□□□□□ -2.5
HDAC9-205ENST00000411993 ANKRD36CQ5JPF3 1778 aa-0.57□□□□□ -2.5
HDAC9-205ENST00000411993 RB1CC1Q8TDY2 1594 aa-0.57□□□□□ -2.5
HDAC9-205ENST00000411993 NBEAQ8NFP9 2946 aa-0.58□□□□□ -2.5
HDAC9-205ENST00000411993 PKHD1L1Q86WI1 4243 aa-0.58□□□□□ -2.5
HDAC9-205ENST00000411993 TJP1Q07157 1748 aa-0.58□□□□□ -2.5
HDAC9-205ENST00000411993 KIAA0586Q9BVV6 1533 aa-0.58□□□□□ -2.5
HDAC9-205ENST00000411993 ZC3H13Q5T200 1668 aaKnown RBP-0.58□□□□□ -2.5
HDAC9-205ENST00000411993 ARHGAP35Q9NRY4 1499 aa-0.58□□□□□ -2.5
HDAC9-205ENST00000411993 BVES-AS1Q5T3Y7 98 aa-0.58□□□□□ -2.5
HDAC9-205ENST00000411993 COL12A1Q99715 3063 aa-0.58□□□□□ -2.5
HDAC9-205ENST00000411993 ACACBO00763 2458 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms