RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 V9GYH0 126 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TRBV20OR9-2A0A075B6H5 130 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 A0A0G2JQZ4 141 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 A0A1B0GUT8 65 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 C20orf202A1L168 122 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 MAP1LC3B2A6NCE7 125 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 ZNF815PA8K554 130 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 LEPROTO15243 131 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 S100A6P06703 90 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 IL7P13232 177 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 RPL35P42766 123 aaKnown RBP1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 POLR2KP53803 58 aaKnown RBP1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 KRTAP12-1P59990 96 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 KRTAP6-3Q3LI67 103 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 ALKAL2Q6UX46 152 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 C5orf38Q86SI9 138 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 S100ZQ8WXG8 99 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 PLEKHB2Q96CS7 222 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 MAP1LC3BQ9GZQ8 125 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 CYSTM1Q9H1C7 97 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 MED9Q9NWA0 146 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 C6orf48Q9UBA6 75 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 LAMTOR2Q9Y2Q5 125 aa1.08□□□□□ -2.24
RNU6-1140P-201ENST00000410517 TRAV9-1A0A075B6T8 112 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 TRBV10-2A0A0K0K1G8 114 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 TMEM238C9JI98 176 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 H3BRM9 83 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 H3BT86 120 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 Q5XG85 94 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 UNQ6190/PRO20217Q6UXQ8 127 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 ATP11AUNQ6ZP68 121 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 AKAP14Q86UN6 197 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 COA5Q86WW8 74 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 KCNRGQ8N5I3 272 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 SFT2D1Q8WV19 159 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 TMEM141Q96I45 108 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 SPRR4Q96PI1 79 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 SCGB3A1Q96QR1 104 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 TMEM126AQ9H061 195 aa1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 NHP2Q9NX24 153 aaKnown RBP1.07□□□□□ -2.24
RNU6-1140P-201ENST00000410517 A8MUN3 132 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 INMT-MINDY4F8WBC2 141 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 LST1O00453 97 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 TCL1BO95988 128 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 HIST1H2BOP23527 126 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 CKS2P33552 79 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 HIST1H2BBP33778 126 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 HIST1H2BDP58876 126 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 KRTAP12-4P60329 112 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 HIST1H2BCP62807 126 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 ZNF345Q14585 488 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 HIST2H2BEQ16778 126 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 MRPL54Q6P161 138 aaKnown RBP1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 ANKRD29Q8N6D5 301 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 HIST1H2BHQ93079 126 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 HIST1H2BNQ99877 126 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 HIST1H2BMQ99879 126 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 TTTY13Q9BZ97 58 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 SMIM3Q9BZL3 60 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 CYSLTR1Q9Y271 337 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 SNURFQ9Y675 71 aa1.06□□□□□ -2.24
RNU6-1140P-201ENST00000410517 MDN1Q9NU22 5596 aa1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 MUC12Q9UKN1 5478 aa1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 FXYD6-FXYD2A0A087WZ82 144 aa1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 ETDCA0A1B0GVM5 59 aa1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 M0R378 163 aa1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 RPL37P61927 97 aaKnown RBP1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 PCOTHQ58A44 107 aa1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 RPL7L1Q6DKI1 246 aaKnown RBP1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 TOMM6Q96B49 74 aa1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 RPL39LQ96EH5 51 aaKnown RBP1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 SMIM2Q9BVW6 85 aa1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 RNASE7Q9H1E1 156 aaKnown RBP1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 TOMM7Q9P0U1 55 aa1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 NAT8BQ9UHF3 227 aa1.05□□□□□ -2.24
RNU6-1140P-201ENST00000410517 KANTRA0A1W2PQU2 76 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 HIGD1CA8MV81 97 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 PRLHP81277 87 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 KRTAP19-2Q3LHN2 52 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 KRTAP20-1Q3LI63 56 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 KRTAP13-4Q3LI77 160 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 C2orf82Q6UX34 121 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 C7orf65Q6ZTY9 151 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 Q6ZUT4 128 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 COX7B2Q8TF08 81 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 AMELXQ99217 191 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 PRO1933Q9H354 126 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 KCNQ1DNQ9H478 68 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 NXT2Q9NPJ8 142 aaKnown RBP1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 LAMTOR3Q9UHA4 124 aa1.04□□□□□ -2.24
RNU6-1140P-201ENST00000410517 IGKV3D-7A0A0C4DH55 119 aa1.03□□□□□ -2.24
RNU6-1140P-201ENST00000410517 SPRR1AP35321 89 aa1.03□□□□□ -2.24
RNU6-1140P-201ENST00000410517 AKR1D1P51857 326 aa1.03□□□□□ -2.24
RNU6-1140P-201ENST00000410517 NDUFA6P56556 154 aa1.03□□□□□ -2.24
RNU6-1140P-201ENST00000410517 KRTAP19-6Q3LI70 58 aa1.03□□□□□ -2.24
RNU6-1140P-201ENST00000410517 C9orf153Q5TBE3 101 aa1.03□□□□□ -2.24
RNU6-1140P-201ENST00000410517 TCTE3Q8IZS6 198 aa1.03□□□□□ -2.24
RNU6-1140P-201ENST00000410517 FAM213BQ8TBF2 198 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms