RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SPRR1BP22528 89 aa8.51□□□□□ -1.05
LIMS1-205ENST00000410093 ST20-AS1Q8NBB2 130 aa8.51□□□□□ -1.05
LIMS1-205ENST00000410093 CRYGAP11844 174 aa8.49□□□□□ -1.05
LIMS1-205ENST00000410093 SPACA4Q8TDM5 124 aa8.49□□□□□ -1.05
LIMS1-205ENST00000410093 VPS13DQ5THJ4 4388 aa8.49□□□□□ -1.05
LIMS1-205ENST00000410093 C9orf153Q5TBE3 101 aa8.49□□□□□ -1.05
LIMS1-205ENST00000410093 PHF5AQ7RTV0 110 aaKnown RBP8.49□□□□□ -1.05
LIMS1-205ENST00000410093 SMIM29Q86T20 159 aa8.49□□□□□ -1.05
LIMS1-205ENST00000410093 EPPK1P58107 5090 aaKnown RBP8.49□□□□□ -1.05
LIMS1-205ENST00000410093 CHTF8P0CG12 524 aa8.48□□□□□ -1.05
LIMS1-205ENST00000410093 BPY2O14599 106 aa8.47□□□□□ -1.05
LIMS1-205ENST00000410093 UBE2AP49459 152 aa8.47□□□□□ -1.05
LIMS1-205ENST00000410093 PRLHP81277 87 aa8.47□□□□□ -1.05
LIMS1-205ENST00000410093 HIGD2AQ9BW72 106 aa8.47□□□□□ -1.05
LIMS1-205ENST00000410093 A0A1W2PNM2 257 aa8.46□□□□□ -1.05
LIMS1-205ENST00000410093 C1orf134Q5TEV5 83 aa8.46□□□□□ -1.05
LIMS1-205ENST00000410093 DPH3Q96FX2 82 aa8.46□□□□□ -1.05
LIMS1-205ENST00000410093 DNAH6Q9C0G6 4158 aa8.46□□□□□ -1.06
LIMS1-205ENST00000410093 LINC00336Q6ZUF6 198 aa8.45□□□□□ -1.06
LIMS1-205ENST00000410093 DNAH10Q8IVF4 4471 aa8.45□□□□□ -1.06
LIMS1-205ENST00000410093 TRAV7A0A075B6U4 112 aa8.44□□□□□ -1.06
LIMS1-205ENST00000410093 BIRC6Q9NR09 4857 aa8.44□□□□□ -1.06
LIMS1-205ENST00000410093 RTL8CO15255 209 aa8.44□□□□□ -1.06
LIMS1-205ENST00000410093 FRAS1Q86XX4 4008 aa8.42□□□□□ -1.06
LIMS1-205ENST00000410093 KRTAP13-1Q8IUC0 172 aa8.42□□□□□ -1.06
LIMS1-205ENST00000410093 RPL37AP61513 92 aaKnown RBP8.41□□□□□ -1.06
LIMS1-205ENST00000410093 PLAC8Q9NZF1 115 aa8.41□□□□□ -1.06
LIMS1-205ENST00000410093 ZNF706Q9Y5V0 76 aaPredicted RBP8.41□□□□□ -1.06
LIMS1-205ENST00000410093 IGFL1Q6UW32 110 aa8.4□□□□□ -1.06
LIMS1-205ENST00000410093 KRTAP11-1Q8IUC1 163 aa8.39□□□□□ -1.07
LIMS1-205ENST00000410093 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.39□□□□□ -1.07
LIMS1-205ENST00000410093 IGLV5-52A0A0A0MRZ9 124 aa8.39□□□□□ -1.07
LIMS1-205ENST00000410093 IGKV4-1P06312 121 aa8.39□□□□□ -1.07
LIMS1-205ENST00000410093 PANO1I0J062 215 aa8.37□□□□□ -1.07
LIMS1-205ENST00000410093 SCXQ7RTU7 201 aa8.37□□□□□ -1.07
LIMS1-205ENST00000410093 TMEM258P61165 79 aa8.34□□□□□ -1.07
LIMS1-205ENST00000410093 LINC00483Q53H64 154 aa8.34□□□□□ -1.07
LIMS1-205ENST00000410093 SS18L2Q9UHA2 77 aa8.34□□□□□ -1.07
LIMS1-205ENST00000410093 HECTD4Q9Y4D8 3996 aa8.31□□□□□ -1.08
LIMS1-205ENST00000410093 NDUFC1O43677 76 aa8.31□□□□□ -1.08
LIMS1-205ENST00000410093 KLKP1Q107X0 134 aa8.31□□□□□ -1.08
LIMS1-205ENST00000410093 ZNF861PO60384 105 aa8.3□□□□□ -1.08
LIMS1-205ENST00000410093 PSORS1C2Q9UIG4 136 aa8.3□□□□□ -1.08
LIMS1-205ENST00000410093 A0A087WSZ3 146 aa8.29□□□□□ -1.08
LIMS1-205ENST00000410093 DSCR10P59022 87 aa8.29□□□□□ -1.08
LIMS1-205ENST00000410093 DNAH2Q9P225 4427 aa8.29□□□□□ -1.08
LIMS1-205ENST00000410093 J3KT08 172 aa8.29□□□□□ -1.08
LIMS1-205ENST00000410093 DNAH17Q9UFH2 4485 aa8.28□□□□□ -1.08
LIMS1-205ENST00000410093 A0A1B0GVY2 172 aa8.28□□□□□ -1.08
LIMS1-205ENST00000410093 Q8N9L7 120 aa8.28□□□□□ -1.08
LIMS1-205ENST00000410093 FAT2Q9NYQ8 4349 aa8.27□□□□□ -1.08
LIMS1-205ENST00000410093 C20orf197Q8N268 126 aa8.27□□□□□ -1.09
LIMS1-205ENST00000410093 OCR1Q9BZK8 76 aa8.27□□□□□ -1.09
LIMS1-205ENST00000410093 RPS28P62857 69 aaKnown RBP8.25□□□□□ -1.09
LIMS1-205ENST00000410093 HCG22E2RYF7 251 aa8.24□□□□□ -1.09
LIMS1-205ENST00000410093 K7EQZ3 153 aa8.23□□□□□ -1.09
LIMS1-205ENST00000410093 LINC00472Q9H8W2 130 aa8.23□□□□□ -1.09
LIMS1-205ENST00000410093 PKHD1P08F94 4074 aa8.22□□□□□ -1.09
LIMS1-205ENST00000410093 IGLV7-43P04211 117 aa8.22□□□□□ -1.09
LIMS1-205ENST00000410093 A8MWP4 228 aa8.2□□□□□ -1.1
LIMS1-205ENST00000410093 ATP5EP56381 51 aaPredicted RBP8.2□□□□□ -1.1
LIMS1-205ENST00000410093 TMEM254Q8TBM7 123 aa8.2□□□□□ -1.1
LIMS1-205ENST00000410093 A0A0G2JQZ4 141 aa8.19□□□□□ -1.1
LIMS1-205ENST00000410093 Q6ZSA8 131 aa8.19□□□□□ -1.1
LIMS1-205ENST00000410093 PRR15Q8IV56 129 aa8.19□□□□□ -1.1
LIMS1-205ENST00000410093 NDUFB1O75438 58 aa8.19□□□□□ -1.1
LIMS1-205ENST00000410093 CYSTM1Q9H1C7 97 aa8.19□□□□□ -1.1
LIMS1-205ENST00000410093 PKD1P98161 4303 aa8.18□□□□□ -1.1
LIMS1-205ENST00000410093 IGLV9-49A0A0B4J1Y8 123 aa8.18□□□□□ -1.1
LIMS1-205ENST00000410093 H7BZZ5 65 aa8.18□□□□□ -1.1
LIMS1-205ENST00000410093 C5orf47Q569G3 176 aa8.18□□□□□ -1.1
LIMS1-205ENST00000410093 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
LIMS1-205ENST00000410093 CD164Q04900 197 aa8.17□□□□□ -1.1
LIMS1-205ENST00000410093 A0A0U1RQV1 116 aa8.16□□□□□ -1.1
LIMS1-205ENST00000410093 FAM236DA0A1B0GTK5 79 aa8.15□□□□□ -1.1
LIMS1-205ENST00000410093 FAM236CP0DP71 79 aa8.15□□□□□ -1.1
LIMS1-205ENST00000410093 SSBP3-AS1Q7Z2R9 100 aa8.15□□□□□ -1.1
LIMS1-205ENST00000410093 CIRBP-AS1Q8TBR5 109 aa8.15□□□□□ -1.1
LIMS1-205ENST00000410093 DNAH11Q96DT5 4516 aa8.15□□□□□ -1.11
LIMS1-205ENST00000410093 KRTAP10-2P60368 255 aa8.14□□□□□ -1.11
LIMS1-205ENST00000410093 DYNC1H1Q14204 4646 aaKnown RBP8.14□□□□□ -1.11
LIMS1-205ENST00000410093 MOBPQ13875 183 aa8.13□□□□□ -1.11
LIMS1-205ENST00000410093 HERC2O95714 4834 aa8.13□□□□□ -1.11
LIMS1-205ENST00000410093 KRTAP29-1A8MX34 341 aaPredicted RBP8.13□□□□□ -1.11
LIMS1-205ENST00000410093 SNURFQ9Y675 71 aa8.13□□□□□ -1.11
LIMS1-205ENST00000410093 CASC2Q6XLA1 102 aa8.12□□□□□ -1.11
LIMS1-205ENST00000410093 FAM30AQ9NZY2 134 aa8.12□□□□□ -1.11
LIMS1-205ENST00000410093 KIAA1109Q2LD37 5005 aa8.11□□□□□ -1.11
LIMS1-205ENST00000410093 H3BPC8 53 aa8.11□□□□□ -1.11
LIMS1-205ENST00000410093 CDK2AP2O75956 126 aa8.11□□□□□ -1.11
LIMS1-205ENST00000410093 DEFB116Q30KQ4 102 aa8.11□□□□□ -1.11
LIMS1-205ENST00000410093 FAM229BQ4G0N7 80 aa8.1□□□□□ -1.11
LIMS1-205ENST00000410093 DNAH8Q96JB1 4490 aa8.09□□□□□ -1.11
LIMS1-205ENST00000410093 MP68P56378 58 aa8.08□□□□□ -1.12
LIMS1-205ENST00000410093 Q96NJ1 140 aa8.08□□□□□ -1.12
LIMS1-205ENST00000410093 SERP1Q9Y6X1 66 aa8.08□□□□□ -1.12
LIMS1-205ENST00000410093 KRTAP10-1P60331 282 aa8.08□□□□□ -1.12
LIMS1-205ENST00000410093 ASB16-AS1Q495Z4 193 aa8.08□□□□□ -1.12
LIMS1-205ENST00000410093 SRRM2Q9UQ35 2752 aaKnown RBP8.07□□□□□ -1.12
LIMS1-205ENST00000410093 WFDC13Q8IUB5 93 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms