RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 SCGB1A1P11684 91 aa8.72□□□□□ -1.01
LIMS2-206ENST00000409754 UBE2AP49459 152 aa8.72□□□□□ -1.01
LIMS2-206ENST00000409754 HIGD2AQ9BW72 106 aa8.72□□□□□ -1.01
LIMS2-206ENST00000409754 KRTAP13-1Q8IUC0 172 aa8.7□□□□□ -1.02
LIMS2-206ENST00000409754 Q6Q795 121 aa8.69□□□□□ -1.02
LIMS2-206ENST00000409754 C3orf22Q8N5N4 141 aa8.69□□□□□ -1.02
LIMS2-206ENST00000409754 FAT1Q14517 4588 aa8.69□□□□□ -1.02
LIMS2-206ENST00000409754 KRTAP10-1P60331 282 aa8.68□□□□□ -1.02
LIMS2-206ENST00000409754 SMIM29Q86T20 159 aa8.68□□□□□ -1.02
LIMS2-206ENST00000409754 TRBV7-7A0A0K0K1E9 115 aa8.67□□□□□ -1.02
LIMS2-206ENST00000409754 SPRR1BP22528 89 aa8.66□□□□□ -1.02
LIMS2-206ENST00000409754 KRTAP17-1Q9BYP8 105 aa8.66□□□□□ -1.02
LIMS2-206ENST00000409754 PCP4P48539 62 aa8.65□□□□□ -1.02
LIMS2-206ENST00000409754 Q6JHZ5 121 aa8.65□□□□□ -1.02
LIMS2-206ENST00000409754 UBL5Q9BZL1 73 aa8.65□□□□□ -1.02
LIMS2-206ENST00000409754 IMUPQ9GZP8 106 aa8.65□□□□□ -1.02
LIMS2-206ENST00000409754 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.03
LIMS2-206ENST00000409754 F8WEM9 126 aa8.64□□□□□ -1.03
LIMS2-206ENST00000409754 C1orf137Q5JT78 98 aa8.63□□□□□ -1.03
LIMS2-206ENST00000409754 Q6ZSA8 131 aa8.63□□□□□ -1.03
LIMS2-206ENST00000409754 FAM30AQ9NZY2 134 aa8.63□□□□□ -1.03
LIMS2-206ENST00000409754 ATP5EP2Q5VTU8 51 aa8.62□□□□□ -1.03
LIMS2-206ENST00000409754 IGLV8-61A0A075B6I0 122 aa8.62□□□□□ -1.03
LIMS2-206ENST00000409754 A0A1B0GW54 56 aa8.61□□□□□ -1.03
LIMS2-206ENST00000409754 CIRBP-AS1Q8TBR5 109 aa8.61□□□□□ -1.03
LIMS2-206ENST00000409754 Q6ZVQ6 151 aa8.6□□□□□ -1.03
LIMS2-206ENST00000409754 IGKV3D-7A0A0C4DH55 119 aa8.59□□□□□ -1.03
LIMS2-206ENST00000409754 A0A1W2PNM2 257 aa8.59□□□□□ -1.03
LIMS2-206ENST00000409754 ZNF861PO60384 105 aa8.59□□□□□ -1.03
LIMS2-206ENST00000409754 HAMPP81172 84 aa8.59□□□□□ -1.03
LIMS2-206ENST00000409754 Q8NBF4 154 aa8.58□□□□□ -1.04
LIMS2-206ENST00000409754 ABCA13Q86UQ4 5058 aa8.58□□□□□ -1.04
LIMS2-206ENST00000409754 SCXQ7RTU7 201 aa8.58□□□□□ -1.04
LIMS2-206ENST00000409754 SPRR4Q96PI1 79 aa8.57□□□□□ -1.04
LIMS2-206ENST00000409754 ZNF706Q9Y5V0 76 aaPredicted RBP8.57□□□□□ -1.04
LIMS2-206ENST00000409754 IGFL1Q6UW32 110 aa8.56□□□□□ -1.04
LIMS2-206ENST00000409754 IGLV7-43P04211 117 aa8.55□□□□□ -1.04
LIMS2-206ENST00000409754 LINC00483Q53H64 154 aa8.55□□□□□ -1.04
LIMS2-206ENST00000409754 CDK2AP2O75956 126 aa8.54□□□□□ -1.04
LIMS2-206ENST00000409754 CRYGAP11844 174 aa8.53□□□□□ -1.04
LIMS2-206ENST00000409754 CXCL6P80162 114 aa8.53□□□□□ -1.04
LIMS2-206ENST00000409754 NREPQ16612 68 aa8.52□□□□□ -1.05
LIMS2-206ENST00000409754 PCLOQ9Y6V0 5065 aa8.5□□□□□ -1.05
LIMS2-206ENST00000409754 FAM236AA0A1B0GUQ0 79 aa8.5□□□□□ -1.05
LIMS2-206ENST00000409754 FAM236BA0A1B0GV22 79 aa8.5□□□□□ -1.05
LIMS2-206ENST00000409754 A0A0G2JQZ4 141 aa8.49□□□□□ -1.05
LIMS2-206ENST00000409754 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
LIMS2-206ENST00000409754 VPS13BQ7Z7G8 4022 aa8.48□□□□□ -1.05
LIMS2-206ENST00000409754 HIST1H4AP62805 103 aaKnown RBP8.48□□□□□ -1.05
LIMS2-206ENST00000409754 SRRM2Q9UQ35 2752 aaKnown RBP8.48□□□□□ -1.05
LIMS2-206ENST00000409754 RPL37AP61513 92 aaKnown RBP8.47□□□□□ -1.05
LIMS2-206ENST00000409754 A0A087WVE0 104 aa8.47□□□□□ -1.05
LIMS2-206ENST00000409754 ANAPC13Q9BS18 74 aa8.47□□□□□ -1.05
LIMS2-206ENST00000409754 IGLV9-49A0A0B4J1Y8 123 aa8.45□□□□□ -1.06
LIMS2-206ENST00000409754 BPY2O14599 106 aa8.45□□□□□ -1.06
LIMS2-206ENST00000409754 C9orf153Q5TBE3 101 aa8.44□□□□□ -1.06
LIMS2-206ENST00000409754 SMR3BP02814 79 aaPredicted RBP8.43□□□□□ -1.06
LIMS2-206ENST00000409754 A0A087WSZ3 146 aa8.43□□□□□ -1.06
LIMS2-206ENST00000409754 Q8N1X5 172 aa8.41□□□□□ -1.06
LIMS2-206ENST00000409754 ANAPC11Q9NYG5 84 aa8.41□□□□□ -1.06
LIMS2-206ENST00000409754 ATOX1O00244 68 aa8.4□□□□□ -1.06
LIMS2-206ENST00000409754 KRTAP10-4P60372 401 aaPredicted RBP8.4□□□□□ -1.06
LIMS2-206ENST00000409754 MOBPQ13875 183 aa8.4□□□□□ -1.06
LIMS2-206ENST00000409754 MYCBP2O75592 4640 aa8.39□□□□□ -1.07
LIMS2-206ENST00000409754 PKHD1L1Q86WI1 4243 aa8.38□□□□□ -1.07
LIMS2-206ENST00000409754 IGKV4-1P06312 121 aa8.38□□□□□ -1.07
LIMS2-206ENST00000409754 Q5VSD8 79 aa8.36□□□□□ -1.07
LIMS2-206ENST00000409754 Q8N9L7 120 aa8.36□□□□□ -1.07
LIMS2-206ENST00000409754 DSCR10P59022 87 aa8.35□□□□□ -1.07
LIMS2-206ENST00000409754 FAM229BQ4G0N7 80 aa8.34□□□□□ -1.07
LIMS2-206ENST00000409754 SSBP3-AS1Q7Z2R9 100 aa8.33□□□□□ -1.08
LIMS2-206ENST00000409754 LRP1Q07954 4544 aaKnown RBP8.33□□□□□ -1.08
LIMS2-206ENST00000409754 LINC00472Q9H8W2 130 aa8.32□□□□□ -1.08
LIMS2-206ENST00000409754 FAT3Q8TDW7 4589 aa8.31□□□□□ -1.08
LIMS2-206ENST00000409754 HRCT1Q6UXD1 115 aa8.31□□□□□ -1.08
LIMS2-206ENST00000409754 SS18L2Q9UHA2 77 aa8.31□□□□□ -1.08
LIMS2-206ENST00000409754 FLG2Q5D862 2391 aaPredicted RBP8.3□□□□□ -1.08
LIMS2-206ENST00000409754 K7EQZ3 153 aa8.29□□□□□ -1.08
LIMS2-206ENST00000409754 KRTAP1-4P0C5Y4 121 aa8.29□□□□□ -1.08
LIMS2-206ENST00000409754 CD164Q04900 197 aa8.29□□□□□ -1.08
LIMS2-206ENST00000409754 DEFB116Q30KQ4 102 aa8.29□□□□□ -1.08
LIMS2-206ENST00000409754 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
LIMS2-206ENST00000409754 A0A087X002 238 aa8.29□□□□□ -1.08
LIMS2-206ENST00000409754 CCDC179H3BU77 68 aa8.29□□□□□ -1.08
LIMS2-206ENST00000409754 COX7CP15954 63 aa8.29□□□□□ -1.08
LIMS2-206ENST00000409754 SERP2Q8N6R1 65 aa8.29□□□□□ -1.08
LIMS2-206ENST00000409754 J3KT08 172 aa8.28□□□□□ -1.08
LIMS2-206ENST00000409754 UQCRQO14949 82 aa8.28□□□□□ -1.08
LIMS2-206ENST00000409754 SMIM20Q8N5G0 67 aa8.28□□□□□ -1.08
LIMS2-206ENST00000409754 KRTAP13-2Q52LG2 175 aa8.27□□□□□ -1.09
LIMS2-206ENST00000409754 FAM229AH3BQW9 127 aa8.26□□□□□ -1.09
LIMS2-206ENST00000409754 Q96NJ1 140 aa8.25□□□□□ -1.09
LIMS2-206ENST00000409754 A8MWP4 228 aa8.25□□□□□ -1.09
LIMS2-206ENST00000409754 TRAV7A0A075B6U4 112 aa8.24□□□□□ -1.09
LIMS2-206ENST00000409754 PRR15Q8IV56 129 aa8.23□□□□□ -1.09
LIMS2-206ENST00000409754 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
LIMS2-206ENST00000409754 PLA2G1BP04054 148 aaKnown RBP8.22□□□□□ -1.09
LIMS2-206ENST00000409754 NDUFB1O75438 58 aa8.2□□□□□ -1.1
LIMS2-206ENST00000409754 ASB16-AS1Q495Z4 193 aa8.2□□□□□ -1.1
LIMS2-206ENST00000409754 Q5XG85 94 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms