RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 TEX49A0A1B0GTD5 131 aa12.3□□□□□ -0.44
CHKB-201ENST00000406938 GHRHP01286 108 aa12.29□□□□□ -0.44
CHKB-201ENST00000406938 PPDPFLQ8WWR9 84 aa12.29□□□□□ -0.44
CHKB-201ENST00000406938 H3BT86 120 aa12.29□□□□□ -0.44
CHKB-201ENST00000406938 TMEM256-PLSCR3K7ERE1 68 aa12.29□□□□□ -0.44
CHKB-201ENST00000406938 H3BQ85 93 aa12.27□□□□□ -0.44
CHKB-201ENST00000406938 SPRR1BP22528 89 aa12.27□□□□□ -0.44
CHKB-201ENST00000406938 LINC00483Q53H64 154 aa12.27□□□□□ -0.44
CHKB-201ENST00000406938 C3orf22Q8N5N4 141 aa12.27□□□□□ -0.44
CHKB-201ENST00000406938 ANAPC11Q9NYG5 84 aa12.26□□□□□ -0.45
CHKB-201ENST00000406938 KRTAP1-4P0C5Y4 121 aa12.24□□□□□ -0.45
CHKB-201ENST00000406938 SMIM29Q86T20 159 aa12.23□□□□□ -0.45
CHKB-201ENST00000406938 NDUFV3P56181 108 aaKnown RBP12.21□□□□□ -0.46
CHKB-201ENST00000406938 LAMTOR3Q9UHA4 124 aa12.21□□□□□ -0.46
CHKB-201ENST00000406938 PKHD1L1Q86WI1 4243 aa12.2□□□□□ -0.46
CHKB-201ENST00000406938 HERC2O95714 4834 aa12.2□□□□□ -0.46
CHKB-201ENST00000406938 A0A1B0GV72 72 aa12.19□□□□□ -0.46
CHKB-201ENST00000406938 A0A087X002 238 aa12.16□□□□□ -0.46
CHKB-201ENST00000406938 IGLV9-49A0A0B4J1Y8 123 aa12.16□□□□□ -0.46
CHKB-201ENST00000406938 F8WEM9 126 aa12.16□□□□□ -0.46
CHKB-201ENST00000406938 FAM229BQ4G0N7 80 aa12.16□□□□□ -0.46
CHKB-201ENST00000406938 KRTAP4-5Q9BYR2 181 aa12.15□□□□□ -0.46
CHKB-201ENST00000406938 SIGMAR1Q99720 223 aa12.13□□□□□ -0.47
CHKB-201ENST00000406938 SCGB1A1P11684 91 aa12.12□□□□□ -0.47
CHKB-201ENST00000406938 CRYGAP11844 174 aa12.12□□□□□ -0.47
CHKB-201ENST00000406938 C9orf153Q5TBE3 101 aa12.12□□□□□ -0.47
CHKB-201ENST00000406938 MOBPQ13875 183 aa12.11□□□□□ -0.47
CHKB-201ENST00000406938 JMJD7-PLA2G4BH0Y9G9 81 aa12.11□□□□□ -0.47
CHKB-201ENST00000406938 KRTAP13-2Q52LG2 175 aa12.11□□□□□ -0.47
CHKB-201ENST00000406938 OBSCN-AS1Q96MR7 158 aa12.11□□□□□ -0.47
CHKB-201ENST00000406938 PCP4P48539 62 aa12.1□□□□□ -0.47
CHKB-201ENST00000406938 IGLV8-61A0A075B6I0 122 aa12.09□□□□□ -0.47
CHKB-201ENST00000406938 RBM3P98179 157 aaKnown RBP12.09□□□□□ -0.47
CHKB-201ENST00000406938 PRR26Q8N8Z3 221 aa12.08□□□□□ -0.48
CHKB-201ENST00000406938 Q8NBF4 154 aa12.08□□□□□ -0.48
CHKB-201ENST00000406938 FAM240AA0A1B0GVK7 77 aa12.08□□□□□ -0.48
CHKB-201ENST00000406938 C14orf132Q9NPU4 83 aa12.08□□□□□ -0.48
CHKB-201ENST00000406938 A0A0G2JQZ4 141 aa12.04□□□□□ -0.48
CHKB-201ENST00000406938 DSCR8Q96T75 97 aa12.04□□□□□ -0.48
CHKB-201ENST00000406938 TRBV7-4A0A0J9YYF1 115 aa12.04□□□□□ -0.48
CHKB-201ENST00000406938 ACYP1P07311 99 aa12.04□□□□□ -0.48
CHKB-201ENST00000406938 IGFL1Q6UW32 110 aa12.04□□□□□ -0.48
CHKB-201ENST00000406938 ABCA13Q86UQ4 5058 aa12.03□□□□□ -0.48
CHKB-201ENST00000406938 Q6JHZ5 121 aa12.03□□□□□ -0.48
CHKB-201ENST00000406938 TYMSOSQ8TAI1 123 aa12.02□□□□□ -0.49
CHKB-201ENST00000406938 FLG2Q5D862 2391 aaPredicted RBP12.01□□□□□ -0.49
CHKB-201ENST00000406938 CDIP1Q9H305 208 aa12□□□□□ -0.49
CHKB-201ENST00000406938 LOC110117498A0A087WWA1 95 aa12□□□□□ -0.49
CHKB-201ENST00000406938 SSBP3-AS1Q7Z2R9 100 aa12□□□□□ -0.49
CHKB-201ENST00000406938 LRP1Q07954 4544 aaKnown RBP12□□□□□ -0.49
CHKB-201ENST00000406938 MYCBP2O75592 4640 aa11.99□□□□□ -0.49
CHKB-201ENST00000406938 Q6ZQT0 140 aa11.98□□□□□ -0.49
CHKB-201ENST00000406938 CCKP06307 115 aa11.96□□□□□ -0.5
CHKB-201ENST00000406938 PDE6GP18545 87 aa11.96□□□□□ -0.5
CHKB-201ENST00000406938 FAT3Q8TDW7 4589 aa11.96□□□□□ -0.5
CHKB-201ENST00000406938 A0A1W2PNM2 257 aa11.94□□□□□ -0.5
CHKB-201ENST00000406938 HRCT1Q6UXD1 115 aa11.92□□□□□ -0.5
CHKB-201ENST00000406938 KRTAP10-8P60410 259 aa11.91□□□□□ -0.5
CHKB-201ENST00000406938 OXTP01178 125 aa11.89□□□□□ -0.51
CHKB-201ENST00000406938 Q6Q795 121 aa11.89□□□□□ -0.51
CHKB-201ENST00000406938 LINC00304Q8N9R0 145 aa11.89□□□□□ -0.51
CHKB-201ENST00000406938 MT1HL1P0DM35 61 aa11.87□□□□□ -0.51
CHKB-201ENST00000406938 C21orf62-AS1Q17RA5 79 aa11.87□□□□□ -0.51
CHKB-201ENST00000406938 TNXBP22105 4242 aa11.86□□□□□ -0.51
CHKB-201ENST00000406938 CD164Q04900 197 aa11.86□□□□□ -0.51
CHKB-201ENST00000406938 TRBV7-7A0A0K0K1E9 115 aa11.85□□□□□ -0.51
CHKB-201ENST00000406938 KRTAP29-1A8MX34 341 aaPredicted RBP11.84□□□□□ -0.51
CHKB-201ENST00000406938 C4orf48Q5BLP8 95 aa11.84□□□□□ -0.51
CHKB-201ENST00000406938 MT-ATP8P03928 68 aa11.83□□□□□ -0.52
CHKB-201ENST00000406938 A0A087WSZ3 146 aa11.82□□□□□ -0.52
CHKB-201ENST00000406938 SPAG11AQ6PDA7 123 aa11.81□□□□□ -0.52
CHKB-201ENST00000406938 IMUPQ9GZP8 106 aa11.81□□□□□ -0.52
CHKB-201ENST00000406938 SPINK1P00995 79 aa11.8□□□□□ -0.52
CHKB-201ENST00000406938 PCLOQ9Y6V0 5065 aa11.8□□□□□ -0.52
CHKB-201ENST00000406938 A0A1B0GW54 56 aa11.79□□□□□ -0.52
CHKB-201ENST00000406938 LINC00643Q86TS7 51 aa11.78□□□□□ -0.52
CHKB-201ENST00000406938 RPS29P62273 56 aaKnown RBP11.75□□□□□ -0.53
CHKB-201ENST00000406938 LINC00846Q9NV44 126 aa11.75□□□□□ -0.53
CHKB-201ENST00000406938 LIMD2Q9BT23 127 aa11.74□□□□□ -0.53
CHKB-201ENST00000406938 SS18L2Q9UHA2 77 aa11.73□□□□□ -0.53
CHKB-201ENST00000406938 Q5XG85 94 aa11.71□□□□□ -0.53
CHKB-201ENST00000406938 J3QL48 77 aa11.71□□□□□ -0.54
CHKB-201ENST00000406938 NREPQ16612 68 aa11.67□□□□□ -0.54
CHKB-201ENST00000406938 Q6ZVQ6 151 aa11.67□□□□□ -0.54
CHKB-201ENST00000406938 UBL5Q9BZL1 73 aa11.67□□□□□ -0.54
CHKB-201ENST00000406938 ASB16-AS1Q495Z4 193 aa11.66□□□□□ -0.54
CHKB-201ENST00000406938 DMBT1Q9UGM3 2413 aaPredicted RBP11.65□□□□□ -0.55
CHKB-201ENST00000406938 ATP5EP2Q5VTU8 51 aa11.64□□□□□ -0.55
CHKB-201ENST00000406938 Q96NJ1 140 aa11.64□□□□□ -0.55
CHKB-201ENST00000406938 LINC00472Q9H8W2 130 aa11.62□□□□□ -0.55
CHKB-201ENST00000406938 DEFB116Q30KQ4 102 aa11.6□□□□□ -0.55
CHKB-201ENST00000406938 C1orf195Q5TG92 126 aa11.6□□□□□ -0.55
CHKB-201ENST00000406938 ANAPC13Q9BS18 74 aa11.6□□□□□ -0.55
CHKB-201ENST00000406938 RETNLBQ9BQ08 111 aa11.59□□□□□ -0.55
CHKB-201ENST00000406938 IGKV4-1P06312 121 aa11.54□□□□□ -0.56
CHKB-201ENST00000406938 IGKV3D-7A0A0C4DH55 119 aa11.53□□□□□ -0.56
CHKB-201ENST00000406938 BPY2O14599 106 aa11.53□□□□□ -0.56
CHKB-201ENST00000406938 J3KT08 172 aa11.51□□□□□ -0.57
CHKB-201ENST00000406938 DSCR10P59022 87 aa11.48□□□□□ -0.57
CHKB-201ENST00000406938 CXCL6P80162 114 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms