RNA–Protein interactions for RNA: ENST00000406246.7

RELA-202, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RELA, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-202ENST00000406246 KRTAP13-1Q8IUC0 172 aa11.64□□□□□ -0.55
RELA-202ENST00000406246 IGKV3D-7A0A0C4DH55 119 aa11.63□□□□□ -0.55
RELA-202ENST00000406246 ANAPC11Q9NYG5 84 aa11.59□□□□□ -0.55
RELA-202ENST00000406246 H0Y9J4 135 aa11.59□□□□□ -0.55
RELA-202ENST00000406246 DYNC1H1Q14204 4646 aaKnown RBP11.59□□□□□ -0.55
RELA-202ENST00000406246 LINC00643Q86TS7 51 aa11.58□□□□□ -0.56
RELA-202ENST00000406246 RYR3Q15413 4870 aa11.57□□□□□ -0.56
RELA-202ENST00000406246 A0A1W2PNM2 257 aa11.56□□□□□ -0.56
RELA-202ENST00000406246 VPS13BQ7Z7G8 4022 aa11.56□□□□□ -0.56
RELA-202ENST00000406246 Q6ZSA8 131 aa11.54□□□□□ -0.56
RELA-202ENST00000406246 PDE6GP18545 87 aa11.53□□□□□ -0.56
RELA-202ENST00000406246 F8WEM9 126 aa11.53□□□□□ -0.56
RELA-202ENST00000406246 IGFL1Q6UW32 110 aa11.52□□□□□ -0.57
RELA-202ENST00000406246 Q6ZVQ6 151 aa11.52□□□□□ -0.57
RELA-202ENST00000406246 UBL5Q9BZL1 73 aa11.51□□□□□ -0.57
RELA-202ENST00000406246 IGLV9-49A0A0B4J1Y8 123 aa11.51□□□□□ -0.57
RELA-202ENST00000406246 A0A087WVE0 104 aa11.5□□□□□ -0.57
RELA-202ENST00000406246 ZNF861PO60384 105 aa11.5□□□□□ -0.57
RELA-202ENST00000406246 SPRR4Q96PI1 79 aa11.49□□□□□ -0.57
RELA-202ENST00000406246 IGLV7-43P04211 117 aa11.48□□□□□ -0.57
RELA-202ENST00000406246 TRBV7-7A0A0K0K1E9 115 aa11.47□□□□□ -0.57
RELA-202ENST00000406246 Q6JHZ5 121 aa11.46□□□□□ -0.57
RELA-202ENST00000406246 SPRR1BP22528 89 aa11.45□□□□□ -0.58
RELA-202ENST00000406246 HIST1H4AP62805 103 aaKnown RBP11.45□□□□□ -0.58
RELA-202ENST00000406246 Q8NBF4 154 aa11.45□□□□□ -0.58
RELA-202ENST00000406246 A0A1B0GVY2 172 aa11.44□□□□□ -0.58
RELA-202ENST00000406246 FAT1Q14517 4588 aa11.44□□□□□ -0.58
RELA-202ENST00000406246 SCGB1A1P11684 91 aa11.44□□□□□ -0.58
RELA-202ENST00000406246 LINC00336Q6ZUF6 198 aa11.43□□□□□ -0.58
RELA-202ENST00000406246 C9orf153Q5TBE3 101 aa11.43□□□□□ -0.58
RELA-202ENST00000406246 SMR3BP02814 79 aaPredicted RBP11.42□□□□□ -0.58
RELA-202ENST00000406246 Q8N9L7 120 aa11.42□□□□□ -0.58
RELA-202ENST00000406246 APOBP04114 4563 aaKnown RBP11.41□□□□□ -0.58
RELA-202ENST00000406246 FAM236AA0A1B0GUQ0 79 aa11.41□□□□□ -0.58
RELA-202ENST00000406246 FAM236BA0A1B0GV22 79 aa11.41□□□□□ -0.58
RELA-202ENST00000406246 NREPQ16612 68 aa11.4□□□□□ -0.58
RELA-202ENST00000406246 HRCT1Q6UXD1 115 aa11.4□□□□□ -0.58
RELA-202ENST00000406246 DEFB116Q30KQ4 102 aa11.4□□□□□ -0.58
RELA-202ENST00000406246 IGLV8-61A0A075B6I0 122 aa11.39□□□□□ -0.59
RELA-202ENST00000406246 Q6Q795 121 aa11.39□□□□□ -0.59
RELA-202ENST00000406246 A0A087WSZ3 146 aa11.38□□□□□ -0.59
RELA-202ENST00000406246 MOBPQ13875 183 aa11.37□□□□□ -0.59
RELA-202ENST00000406246 LINC00483Q53H64 154 aa11.36□□□□□ -0.59
RELA-202ENST00000406246 CRYGAP11844 174 aa11.36□□□□□ -0.59
RELA-202ENST00000406246 ANAPC13Q9BS18 74 aa11.35□□□□□ -0.59
RELA-202ENST00000406246 IMUPQ9GZP8 106 aa11.35□□□□□ -0.59
RELA-202ENST00000406246 ZNF706Q9Y5V0 76 aaPredicted RBP11.34□□□□□ -0.59
RELA-202ENST00000406246 BPY2O14599 106 aa11.32□□□□□ -0.6
RELA-202ENST00000406246 ATP5EP2Q5VTU8 51 aa11.29□□□□□ -0.6
RELA-202ENST00000406246 A0A087X002 238 aa11.28□□□□□ -0.6
RELA-202ENST00000406246 CXCL6P80162 114 aa11.26□□□□□ -0.61
RELA-202ENST00000406246 RPL37AP61513 92 aaKnown RBP11.24□□□□□ -0.61
RELA-202ENST00000406246 CCDC179H3BU77 68 aa11.22□□□□□ -0.61
RELA-202ENST00000406246 IGKV4-1P06312 121 aa11.22□□□□□ -0.61
RELA-202ENST00000406246 DSCR10P59022 87 aa11.22□□□□□ -0.61
RELA-202ENST00000406246 A0A1B0GW54 56 aa11.2□□□□□ -0.62
RELA-202ENST00000406246 K7EQZ3 153 aa11.2□□□□□ -0.62
RELA-202ENST00000406246 KRTAP13-2Q52LG2 175 aa11.2□□□□□ -0.62
RELA-202ENST00000406246 KRTAP1-4P0C5Y4 121 aa11.19□□□□□ -0.62
RELA-202ENST00000406246 EPPK1P58107 5090 aaKnown RBP11.18□□□□□ -0.62
RELA-202ENST00000406246 PLA2G1BP04054 148 aaKnown RBP11.14□□□□□ -0.63
RELA-202ENST00000406246 HSPG2P98160 4391 aa11.13□□□□□ -0.63
RELA-202ENST00000406246 LINC00472Q9H8W2 130 aa11.13□□□□□ -0.63
RELA-202ENST00000406246 KIAA1109Q2LD37 5005 aa11.12□□□□□ -0.63
RELA-202ENST00000406246 KRTAP10-4P60372 401 aaPredicted RBP11.1□□□□□ -0.63
RELA-202ENST00000406246 ATOX1O00244 68 aa11.09□□□□□ -0.63
RELA-202ENST00000406246 Q96NJ1 140 aa11.09□□□□□ -0.63
RELA-202ENST00000406246 SPINK6Q6UWN8 80 aa11.08□□□□□ -0.64
RELA-202ENST00000406246 PRR26Q8N8Z3 221 aa11.07□□□□□ -0.64
RELA-202ENST00000406246 RYR1P21817 5038 aa11.05□□□□□ -0.64
RELA-202ENST00000406246 WFDC13Q8IUB5 93 aa11.05□□□□□ -0.64
RELA-202ENST00000406246 SSBP3-AS1Q7Z2R9 100 aa11.04□□□□□ -0.64
RELA-202ENST00000406246 KRTAP17-1Q9BYP8 105 aa11.03□□□□□ -0.64
RELA-202ENST00000406246 LRP1Q07954 4544 aaKnown RBP11.03□□□□□ -0.64
RELA-202ENST00000406246 FAM229BQ4G0N7 80 aa11.02□□□□□ -0.64
RELA-202ENST00000406246 TYMSOSQ8TAI1 123 aa11.01□□□□□ -0.65
RELA-202ENST00000406246 CYSTM1Q9H1C7 97 aa11.01□□□□□ -0.65
RELA-202ENST00000406246 COX7CP15954 63 aa11□□□□□ -0.65
RELA-202ENST00000406246 SERP2Q8N6R1 65 aa11□□□□□ -0.65
RELA-202ENST00000406246 SS18L2Q9UHA2 77 aa11□□□□□ -0.65
RELA-202ENST00000406246 A8MWP4 228 aa10.99□□□□□ -0.65
RELA-202ENST00000406246 FLG2Q5D862 2391 aaPredicted RBP10.98□□□□□ -0.65
RELA-202ENST00000406246 PRR15Q8IV56 129 aa10.98□□□□□ -0.65
RELA-202ENST00000406246 PKHD1L1Q86WI1 4243 aa10.97□□□□□ -0.65
RELA-202ENST00000406246 HCG22E2RYF7 251 aa10.97□□□□□ -0.65
RELA-202ENST00000406246 UQCRQO14949 82 aa10.95□□□□□ -0.66
RELA-202ENST00000406246 IGHV6-1A0A0B4J1U7 121 aa10.95□□□□□ -0.66
RELA-202ENST00000406246 NOTCH2NLQ7Z3S9 236 aa10.94□□□□□ -0.66
RELA-202ENST00000406246 Q5VSD8 79 aa10.93□□□□□ -0.66
RELA-202ENST00000406246 CD164Q04900 197 aa10.92□□□□□ -0.66
RELA-202ENST00000406246 FAM229AH3BQW9 127 aa10.91□□□□□ -0.66
RELA-202ENST00000406246 TRAV7A0A075B6U4 112 aa10.9□□□□□ -0.66
RELA-202ENST00000406246 C20orf197Q8N268 126 aa10.9□□□□□ -0.66
RELA-202ENST00000406246 J3KT08 172 aa10.9□□□□□ -0.66
RELA-202ENST00000406246 OCR1Q9BZK8 76 aa10.9□□□□□ -0.66
RELA-202ENST00000406246 NDUFB1O75438 58 aa10.89□□□□□ -0.67
RELA-202ENST00000406246 CASC2Q6XLA1 102 aa10.89□□□□□ -0.67
RELA-202ENST00000406246 MYCBP2O75592 4640 aa10.88□□□□□ -0.67
RELA-202ENST00000406246 MMP24-AS1A0A0U1RRL7 71 aa10.88□□□□□ -0.67
RELA-202ENST00000406246 C4orf48Q5BLP8 95 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms