RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 MAST4O15021 2626 aa6.7□□□□□ -1.34
CLIP4-204ENST00000404424 FAM229BQ4G0N7 80 aa6.69□□□□□ -1.34
CLIP4-204ENST00000404424 APLNQ9ULZ1 77 aa6.69□□□□□ -1.34
CLIP4-204ENST00000404424 LINC00336Q6ZUF6 198 aa6.69□□□□□ -1.34
CLIP4-204ENST00000404424 PHF5AQ7RTV0 110 aaKnown RBP6.69□□□□□ -1.34
CLIP4-204ENST00000404424 NDUFB1O75438 58 aa6.68□□□□□ -1.34
CLIP4-204ENST00000404424 DEFB116Q30KQ4 102 aa6.68□□□□□ -1.34
CLIP4-204ENST00000404424 C9orf163Q8N9P6 203 aa6.68□□□□□ -1.34
CLIP4-204ENST00000404424 PRO0628Q9UI54 55 aa6.68□□□□□ -1.34
CLIP4-204ENST00000404424 hDV103S1A0JD37 113 aa6.67□□□□□ -1.34
CLIP4-204ENST00000404424 NOTCH1P46531 2555 aa6.67□□□□□ -1.34
CLIP4-204ENST00000404424 DNAH10Q8IVF4 4471 aa6.67□□□□□ -1.34
CLIP4-204ENST00000404424 CHTF8P0CG12 524 aa6.66□□□□□ -1.34
CLIP4-204ENST00000404424 MP68P56378 58 aa6.66□□□□□ -1.34
CLIP4-204ENST00000404424 WFDC13Q8IUB5 93 aa6.66□□□□□ -1.34
CLIP4-204ENST00000404424 KRTAP11-1Q8IUC1 163 aa6.66□□□□□ -1.34
CLIP4-204ENST00000404424 KRTAP29-1A8MX34 341 aaPredicted RBP6.66□□□□□ -1.34
CLIP4-204ENST00000404424 B9D2Q9BPU9 175 aa6.66□□□□□ -1.34
CLIP4-204ENST00000404424 CYP4F30PQ9H0H9 118 aa6.66□□□□□ -1.34
CLIP4-204ENST00000404424 PRR15Q8IV56 129 aa6.65□□□□□ -1.34
CLIP4-204ENST00000404424 DNAH9Q9NYC9 4486 aa6.64□□□□□ -1.35
CLIP4-204ENST00000404424 RPL37AP61513 92 aaKnown RBP6.64□□□□□ -1.35
CLIP4-204ENST00000404424 MPLKIPQ8TAP9 179 aa6.64□□□□□ -1.35
CLIP4-204ENST00000404424 LINC00472Q9H8W2 130 aa6.64□□□□□ -1.35
CLIP4-204ENST00000404424 LRCOL1A6NCL2 159 aa6.64□□□□□ -1.35
CLIP4-204ENST00000404424 A8MWP4 228 aa6.64□□□□□ -1.35
CLIP4-204ENST00000404424 H3BPC8 53 aa6.64□□□□□ -1.35
CLIP4-204ENST00000404424 C1orf64Q8NEQ6 169 aa6.64□□□□□ -1.35
CLIP4-204ENST00000404424 CASC2Q6XLA1 102 aa6.62□□□□□ -1.35
CLIP4-204ENST00000404424 TRAV22A0A0B4J277 110 aa6.62□□□□□ -1.35
CLIP4-204ENST00000404424 BAHCC1Q9P281 2608 aa6.62□□□□□ -1.35
CLIP4-204ENST00000404424 LYSTQ99698 3801 aa6.61□□□□□ -1.35
CLIP4-204ENST00000404424 NBDYA0A0U1RRE5 68 aa6.61□□□□□ -1.35
CLIP4-204ENST00000404424 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
CLIP4-204ENST00000404424 DYNC2H1Q8NCM8 4307 aaKnown RBP6.6□□□□□ -1.35
CLIP4-204ENST00000404424 LINC00208Q96KT6 92 aa6.6□□□□□ -1.35
CLIP4-204ENST00000404424 Q1T7F1 81 aa6.59□□□□□ -1.35
CLIP4-204ENST00000404424 NBEAL1Q6ZS30 2694 aa6.59□□□□□ -1.36
CLIP4-204ENST00000404424 H0Y9P7 68 aa6.58□□□□□ -1.36
CLIP4-204ENST00000404424 SPANXA2-OT1Q8N9U9 137 aa6.58□□□□□ -1.36
CLIP4-204ENST00000404424 Q6ZRN7 208 aaPredicted RBP6.58□□□□□ -1.36
CLIP4-204ENST00000404424 NUPR2A6NF83 97 aa6.57□□□□□ -1.36
CLIP4-204ENST00000404424 BRK1Q8WUW1 75 aa6.57□□□□□ -1.36
CLIP4-204ENST00000404424 COL6A5A8TX70 2615 aa6.56□□□□□ -1.36
CLIP4-204ENST00000404424 PANO1I0J062 215 aa6.56□□□□□ -1.36
CLIP4-204ENST00000404424 MDFIQ99750 246 aa6.56□□□□□ -1.36
CLIP4-204ENST00000404424 SPACA4Q8TDM5 124 aa6.55□□□□□ -1.36
CLIP4-204ENST00000404424 MMP24-AS1A0A0U1RRL7 71 aa6.55□□□□□ -1.36
CLIP4-204ENST00000404424 PRR4Q16378 134 aa6.55□□□□□ -1.36
CLIP4-204ENST00000404424 LINC00483Q53H64 154 aa6.54□□□□□ -1.36
CLIP4-204ENST00000404424 ZNF706Q9Y5V0 76 aaPredicted RBP6.53□□□□□ -1.36
CLIP4-204ENST00000404424 V9GYY9 64 aa6.53□□□□□ -1.36
CLIP4-204ENST00000404424 Q96NJ1 140 aa6.52□□□□□ -1.37
CLIP4-204ENST00000404424 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.52□□□□□ -1.37
CLIP4-204ENST00000404424 PLECQ15149 4684 aaKnown RBP6.52□□□□□ -1.37
CLIP4-204ENST00000404424 STAB2Q8WWQ8 2551 aa6.51□□□□□ -1.37
CLIP4-204ENST00000404424 DNAH7Q8WXX0 4024 aa6.51□□□□□ -1.37
CLIP4-204ENST00000404424 IGLV9-49A0A0B4J1Y8 123 aa6.51□□□□□ -1.37
CLIP4-204ENST00000404424 MOBPQ13875 183 aa6.51□□□□□ -1.37
CLIP4-204ENST00000404424 ASB16-AS1Q495Z4 193 aa6.51□□□□□ -1.37
CLIP4-204ENST00000404424 TP53AIP1Q9HCN2 124 aa6.51□□□□□ -1.37
CLIP4-204ENST00000404424 MGAM2Q2M2H8 2515 aa6.5□□□□□ -1.37
CLIP4-204ENST00000404424 A0A087WTM6 91 aa6.49□□□□□ -1.37
CLIP4-204ENST00000404424 C8orf17Q9NRJ1 99 aa6.48□□□□□ -1.37
CLIP4-204ENST00000404424 CSMD3Q7Z407 3707 aa6.47□□□□□ -1.37
CLIP4-204ENST00000404424 IGLV5-52A0A0A0MRZ9 124 aa6.47□□□□□ -1.37
CLIP4-204ENST00000404424 WWC2-AS2Q96NR7 200 aa6.47□□□□□ -1.37
CLIP4-204ENST00000404424 IGLV7-46A0A075B6I9 117 aa6.47□□□□□ -1.37
CLIP4-204ENST00000404424 COL7A1Q02388 2944 aa6.46□□□□□ -1.37
CLIP4-204ENST00000404424 C4orf48Q5BLP8 95 aa6.46□□□□□ -1.38
CLIP4-204ENST00000404424 PSPHP1O15172 72 aa6.45□□□□□ -1.38
CLIP4-204ENST00000404424 PSORS1C2Q9UIG4 136 aa6.45□□□□□ -1.38
CLIP4-204ENST00000404424 A0A1B0GVX0 72 aa6.45□□□□□ -1.38
CLIP4-204ENST00000404424 RTL8CO15255 209 aa6.45□□□□□ -1.38
CLIP4-204ENST00000404424 ZNF861PO60384 105 aa6.45□□□□□ -1.38
CLIP4-204ENST00000404424 C1orf195Q5TG92 126 aa6.45□□□□□ -1.38
CLIP4-204ENST00000404424 Q6ZR54 194 aa6.45□□□□□ -1.38
CLIP4-204ENST00000404424 PLAC8Q9NZF1 115 aa6.45□□□□□ -1.38
CLIP4-204ENST00000404424 CDK2AP2O75956 126 aa6.44□□□□□ -1.38
CLIP4-204ENST00000404424 SRRM2Q9UQ35 2752 aaKnown RBP6.44□□□□□ -1.38
CLIP4-204ENST00000404424 LIMD2Q9BT23 127 aa6.43□□□□□ -1.38
CLIP4-204ENST00000404424 Q8N9P0 234 aaPredicted RBP6.42□□□□□ -1.38
CLIP4-204ENST00000404424 VPS13DQ5THJ4 4388 aa6.42□□□□□ -1.38
CLIP4-204ENST00000404424 IGHV6-1A0A0B4J1U7 121 aa6.42□□□□□ -1.38
CLIP4-204ENST00000404424 A8MUN3 132 aa6.41□□□□□ -1.38
CLIP4-204ENST00000404424 MRPL34Q9BQ48 92 aaKnown RBP6.41□□□□□ -1.38
CLIP4-204ENST00000404424 COA5Q86WW8 74 aa6.4□□□□□ -1.38
CLIP4-204ENST00000404424 NDUFS5O43920 106 aa6.4□□□□□ -1.39
CLIP4-204ENST00000404424 Q5VV11 94 aa6.39□□□□□ -1.39
CLIP4-204ENST00000404424 STARD9Q9P2P6 4700 aa6.39□□□□□ -1.39
CLIP4-204ENST00000404424 HECTD4Q9Y4D8 3996 aa6.38□□□□□ -1.39
CLIP4-204ENST00000404424 CD164Q04900 197 aa6.38□□□□□ -1.39
CLIP4-204ENST00000404424 PCOTHQ58A44 107 aa6.38□□□□□ -1.39
CLIP4-204ENST00000404424 ANAPC11Q9NYG5 84 aa6.38□□□□□ -1.39
CLIP4-204ENST00000404424 TENM2Q9NT68 2774 aa6.36□□□□□ -1.39
CLIP4-204ENST00000404424 DNAH8Q96JB1 4490 aa6.36□□□□□ -1.39
CLIP4-204ENST00000404424 IGLV7-43P04211 117 aa6.36□□□□□ -1.39
CLIP4-204ENST00000404424 DNAH17Q9UFH2 4485 aa6.35□□□□□ -1.39
CLIP4-204ENST00000404424 PRKDCP78527 4128 aaKnown RBP6.35□□□□□ -1.39
CLIP4-204ENST00000404424 FRAS1Q86XX4 4008 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms