RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 C1orf137Q5JT78 98 aa5.6□□□□□ -1.51
LINC01139-201ENST00000400946 REG3GQ6UW15 175 aa5.6□□□□□ -1.51
LINC01139-201ENST00000400946 PRR26Q8N8Z3 221 aa5.6□□□□□ -1.51
LINC01139-201ENST00000400946 IGLV8-61A0A075B6I0 122 aa5.59□□□□□ -1.51
LINC01139-201ENST00000400946 C16orf90A8MZG2 172 aa5.59□□□□□ -1.51
LINC01139-201ENST00000400946 OCR1Q9BZK8 76 aa5.59□□□□□ -1.51
LINC01139-201ENST00000400946 DNAH3Q8TD57 4116 aa5.59□□□□□ -1.51
LINC01139-201ENST00000400946 PRKDCP78527 4128 aaKnown RBP5.59□□□□□ -1.51
LINC01139-201ENST00000400946 NBEAL2Q6ZNJ1 2754 aa5.59□□□□□ -1.51
LINC01139-201ENST00000400946 A0A1W2PNM2 257 aa5.58□□□□□ -1.52
LINC01139-201ENST00000400946 KRTAP7-1Q8IUC3 87 aa5.58□□□□□ -1.52
LINC01139-201ENST00000400946 DEFB105AQ8NG35 78 aa5.58□□□□□ -1.52
LINC01139-201ENST00000400946 H0Y9J4 135 aa5.58□□□□□ -1.52
LINC01139-201ENST00000400946 K7EIL1 84 aa5.58□□□□□ -1.52
LINC01139-201ENST00000400946 SCXQ7RTU7 201 aa5.58□□□□□ -1.52
LINC01139-201ENST00000400946 F8WEM9 126 aa5.57□□□□□ -1.52
LINC01139-201ENST00000400946 UBE2BP63146 152 aa5.57□□□□□ -1.52
LINC01139-201ENST00000400946 TMEM254Q8TBM7 123 aa5.57□□□□□ -1.52
LINC01139-201ENST00000400946 LCE6AA0A183 80 aa5.56□□□□□ -1.52
LINC01139-201ENST00000400946 FAM168BA1KXE4 195 aa5.56□□□□□ -1.52
LINC01139-201ENST00000400946 CASC10Q5T4H9 136 aa5.56□□□□□ -1.52
LINC01139-201ENST00000400946 A0A0U1RQV1 116 aa5.55□□□□□ -1.52
LINC01139-201ENST00000400946 C3orf84H3BNL1 204 aa5.55□□□□□ -1.52
LINC01139-201ENST00000400946 SPRR1BP22528 89 aa5.55□□□□□ -1.52
LINC01139-201ENST00000400946 SMIM29Q86T20 159 aa5.55□□□□□ -1.52
LINC01139-201ENST00000400946 SMIM26A0A096LP01 95 aa5.54□□□□□ -1.52
LINC01139-201ENST00000400946 ST20-AS1Q8NBB2 130 aa5.53□□□□□ -1.52
LINC01139-201ENST00000400946 TGP01266 2768 aa5.53□□□□□ -1.52
LINC01139-201ENST00000400946 LINC00474Q9P2X8 69 aa5.53□□□□□ -1.52
LINC01139-201ENST00000400946 SNURFQ9Y675 71 aa5.53□□□□□ -1.52
LINC01139-201ENST00000400946 DSCR10P59022 87 aa5.52□□□□□ -1.53
LINC01139-201ENST00000400946 LINC00476Q8WZB0 136 aa5.52□□□□□ -1.53
LINC01139-201ENST00000400946 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.52□□□□□ -1.53
LINC01139-201ENST00000400946 A0A096LNI7 61 aa5.51□□□□□ -1.53
LINC01139-201ENST00000400946 PSCAO43653 123 aa5.51□□□□□ -1.53
LINC01139-201ENST00000400946 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
LINC01139-201ENST00000400946 Q5XG85 94 aa5.51□□□□□ -1.53
LINC01139-201ENST00000400946 Q8N9L7 120 aa5.51□□□□□ -1.53
LINC01139-201ENST00000400946 B9D2Q9BPU9 175 aa5.51□□□□□ -1.53
LINC01139-201ENST00000400946 APLNQ9ULZ1 77 aa5.51□□□□□ -1.53
LINC01139-201ENST00000400946 KRTAP9-7A8MTY7 169 aa5.5□□□□□ -1.53
LINC01139-201ENST00000400946 IGFL1Q6UW32 110 aa5.49□□□□□ -1.53
LINC01139-201ENST00000400946 UBE2DNLQ8IWF7 75 aa5.49□□□□□ -1.53
LINC01139-201ENST00000400946 C9orf163Q8N9P6 203 aa5.49□□□□□ -1.53
LINC01139-201ENST00000400946 DNAH9Q9NYC9 4486 aa5.49□□□□□ -1.53
LINC01139-201ENST00000400946 A0A1W2PNN7 141 aa5.48□□□□□ -1.53
LINC01139-201ENST00000400946 HCG22E2RYF7 251 aa5.48□□□□□ -1.53
LINC01139-201ENST00000400946 KRTAP1-5Q9BYS1 174 aa5.48□□□□□ -1.53
LINC01139-201ENST00000400946 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.47□□□□□ -1.53
LINC01139-201ENST00000400946 NDUFB1O75438 58 aa5.47□□□□□ -1.53
LINC01139-201ENST00000400946 ZCCHC13Q8WW36 166 aaKnown RBP5.47□□□□□ -1.53
LINC01139-201ENST00000400946 COL7A1Q02388 2944 aa5.46□□□□□ -1.53
LINC01139-201ENST00000400946 NUPR2A6NF83 97 aa5.46□□□□□ -1.54
LINC01139-201ENST00000400946 H3BPC8 53 aa5.46□□□□□ -1.54
LINC01139-201ENST00000400946 UBE2AP49459 152 aa5.46□□□□□ -1.54
LINC01139-201ENST00000400946 RPL37AP61513 92 aaKnown RBP5.46□□□□□ -1.54
LINC01139-201ENST00000400946 IGKV2-24A0A0C4DH68 120 aa5.45□□□□□ -1.54
LINC01139-201ENST00000400946 K7EQZ3 153 aa5.45□□□□□ -1.54
LINC01139-201ENST00000400946 PRLHP81277 87 aa5.45□□□□□ -1.54
LINC01139-201ENST00000400946 LRCOL1A6NCL2 159 aa5.44□□□□□ -1.54
LINC01139-201ENST00000400946 HRCT1Q6UXD1 115 aa5.44□□□□□ -1.54
LINC01139-201ENST00000400946 HIGD2AQ9BW72 106 aa5.44□□□□□ -1.54
LINC01139-201ENST00000400946 FAM30AQ9NZY2 134 aa5.44□□□□□ -1.54
LINC01139-201ENST00000400946 NBDYA0A0U1RRE5 68 aa5.43□□□□□ -1.54
LINC01139-201ENST00000400946 A0A087WSZ3 146 aa5.43□□□□□ -1.54
LINC01139-201ENST00000400946 WWC2-AS2Q96NR7 200 aa5.43□□□□□ -1.54
LINC01139-201ENST00000400946 HUWE1Q7Z6Z7 4374 aaKnown RBP5.42□□□□□ -1.54
LINC01139-201ENST00000400946 A8MWP4 228 aa5.42□□□□□ -1.54
LINC01139-201ENST00000400946 KRTAP29-1A8MX34 341 aaPredicted RBP5.42□□□□□ -1.54
LINC01139-201ENST00000400946 MP68P56378 58 aa5.42□□□□□ -1.54
LINC01139-201ENST00000400946 FP248Q71RG6 208 aaPredicted RBP5.42□□□□□ -1.54
LINC01139-201ENST00000400946 KRTAP13-1Q8IUC0 172 aa5.42□□□□□ -1.54
LINC01139-201ENST00000400946 CYP4F30PQ9H0H9 118 aa5.42□□□□□ -1.54
LINC01139-201ENST00000400946 LINC00472Q9H8W2 130 aa5.42□□□□□ -1.54
LINC01139-201ENST00000400946 TENM3Q9P273 2699 aa5.41□□□□□ -1.54
LINC01139-201ENST00000400946 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
LINC01139-201ENST00000400946 Q6ZRN7 208 aaPredicted RBP5.41□□□□□ -1.54
LINC01139-201ENST00000400946 PHF5AQ7RTV0 110 aaKnown RBP5.41□□□□□ -1.54
LINC01139-201ENST00000400946 PRR15Q8IV56 129 aa5.41□□□□□ -1.54
LINC01139-201ENST00000400946 hDV103S1A0JD37 113 aa5.4□□□□□ -1.54
LINC01139-201ENST00000400946 ZNF706Q9Y5V0 76 aaPredicted RBP5.39□□□□□ -1.55
LINC01139-201ENST00000400946 LINC00483Q53H64 154 aa5.38□□□□□ -1.55
LINC01139-201ENST00000400946 SPANXA2-OT1Q8N9U9 137 aa5.38□□□□□ -1.55
LINC01139-201ENST00000400946 KRTAP9-3Q9BYQ3 159 aa5.38□□□□□ -1.55
LINC01139-201ENST00000400946 CHTF8P0CG12 524 aa5.38□□□□□ -1.55
LINC01139-201ENST00000400946 CASC2Q6XLA1 102 aa5.38□□□□□ -1.55
LINC01139-201ENST00000400946 SPACA4Q8TDM5 124 aa5.38□□□□□ -1.55
LINC01139-201ENST00000400946 KRTAP11-1Q8IUC1 163 aa5.37□□□□□ -1.55
LINC01139-201ENST00000400946 PLA2G1BP04054 148 aaKnown RBP5.36□□□□□ -1.55
LINC01139-201ENST00000400946 TRAV22A0A0B4J277 110 aa5.35□□□□□ -1.55
LINC01139-201ENST00000400946 TP53AIP1Q9HCN2 124 aa5.35□□□□□ -1.55
LINC01139-201ENST00000400946 MOBPQ13875 183 aa5.34□□□□□ -1.55
LINC01139-201ENST00000400946 WFDC13Q8IUB5 93 aa5.34□□□□□ -1.55
LINC01139-201ENST00000400946 STAB2Q8WWQ8 2551 aa5.34□□□□□ -1.55
LINC01139-201ENST00000400946 DNAH1Q9P2D7 4330 aa5.34□□□□□ -1.56
LINC01139-201ENST00000400946 A0A087WTM6 91 aa5.33□□□□□ -1.56
LINC01139-201ENST00000400946 Q1T7F1 81 aa5.33□□□□□ -1.56
LINC01139-201ENST00000400946 ASB16-AS1Q495Z4 193 aa5.33□□□□□ -1.56
LINC01139-201ENST00000400946 DNAH7Q8WXX0 4024 aa5.33□□□□□ -1.56
LINC01139-201ENST00000400946 A0A0G2JQZ4 141 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms