RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 KRTAP4-16G5E9R7 235 aaPredicted RBP8□□□□□ -1.13
PPP4R1-202ENST00000400555 HCG22E2RYF7 251 aa8□□□□□ -1.13
PPP4R1-202ENST00000400555 PKIGQ9Y2B9 76 aa8□□□□□ -1.13
PPP4R1-202ENST00000400555 C16orf90A8MZG2 172 aa7.99□□□□□ -1.13
PPP4R1-202ENST00000400555 FAM229BQ4G0N7 80 aa7.99□□□□□ -1.13
PPP4R1-202ENST00000400555 LINC00336Q6ZUF6 198 aa7.98□□□□□ -1.13
PPP4R1-202ENST00000400555 SPRR1AP35321 89 aa7.98□□□□□ -1.13
PPP4R1-202ENST00000400555 NDUFS5O43920 106 aa7.98□□□□□ -1.13
PPP4R1-202ENST00000400555 KRTAP11-1Q8IUC1 163 aa7.98□□□□□ -1.13
PPP4R1-202ENST00000400555 MP68P56378 58 aa7.97□□□□□ -1.13
PPP4R1-202ENST00000400555 PLA2G2DQ9UNK4 145 aa7.97□□□□□ -1.13
PPP4R1-202ENST00000400555 B9D2Q9BPU9 175 aa7.97□□□□□ -1.13
PPP4R1-202ENST00000400555 FP248Q71RG6 208 aaPredicted RBP7.96□□□□□ -1.13
PPP4R1-202ENST00000400555 TGP01266 2768 aa7.96□□□□□ -1.13
PPP4R1-202ENST00000400555 ANAPC11Q9NYG5 84 aa7.95□□□□□ -1.14
PPP4R1-202ENST00000400555 PSPHP1O15172 72 aa7.94□□□□□ -1.14
PPP4R1-202ENST00000400555 IGLV5-37A0A075B6J1 123 aa7.94□□□□□ -1.14
PPP4R1-202ENST00000400555 TNP2Q05952 138 aa7.94□□□□□ -1.14
PPP4R1-202ENST00000400555 MDFIQ99750 246 aa7.94□□□□□ -1.14
PPP4R1-202ENST00000400555 CASC2Q6XLA1 102 aa7.93□□□□□ -1.14
PPP4R1-202ENST00000400555 PANO1I0J062 215 aa7.92□□□□□ -1.14
PPP4R1-202ENST00000400555 C14orf177Q52M58 125 aa7.92□□□□□ -1.14
PPP4R1-202ENST00000400555 SPINK6Q6UWN8 80 aa7.92□□□□□ -1.14
PPP4R1-202ENST00000400555 SPRR4Q96PI1 79 aa7.92□□□□□ -1.14
PPP4R1-202ENST00000400555 ATP5EP56381 51 aaPredicted RBP7.9□□□□□ -1.14
PPP4R1-202ENST00000400555 PCOTHQ58A44 107 aa7.9□□□□□ -1.15
PPP4R1-202ENST00000400555 H0Y9P7 68 aa7.89□□□□□ -1.15
PPP4R1-202ENST00000400555 NDUFB1O75438 58 aa7.88□□□□□ -1.15
PPP4R1-202ENST00000400555 C1orf64Q8NEQ6 169 aa7.88□□□□□ -1.15
PPP4R1-202ENST00000400555 APLNQ9ULZ1 77 aa7.88□□□□□ -1.15
PPP4R1-202ENST00000400555 CDK2AP2O75956 126 aa7.88□□□□□ -1.15
PPP4R1-202ENST00000400555 NBDYA0A0U1RRE5 68 aa7.88□□□□□ -1.15
PPP4R1-202ENST00000400555 IGHV6-1A0A0B4J1U7 121 aa7.86□□□□□ -1.15
PPP4R1-202ENST00000400555 C9orf163Q8N9P6 203 aa7.85□□□□□ -1.15
PPP4R1-202ENST00000400555 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.85□□□□□ -1.15
PPP4R1-202ENST00000400555 CNBPP62633 177 aaKnown RBP7.85□□□□□ -1.15
PPP4R1-202ENST00000400555 DNAH10Q8IVF4 4471 aa7.84□□□□□ -1.15
PPP4R1-202ENST00000400555 A0A1B0GW54 56 aa7.84□□□□□ -1.15
PPP4R1-202ENST00000400555 MOBPQ13875 183 aa7.83□□□□□ -1.16
PPP4R1-202ENST00000400555 PRR15Q8IV56 129 aa7.81□□□□□ -1.16
PPP4R1-202ENST00000400555 LYSTQ99698 3801 aa7.81□□□□□ -1.16
PPP4R1-202ENST00000400555 PRO0628Q9UI54 55 aa7.79□□□□□ -1.16
PPP4R1-202ENST00000400555 A8MWP4 228 aa7.79□□□□□ -1.16
PPP4R1-202ENST00000400555 LY6G6CO95867 125 aa7.79□□□□□ -1.16
PPP4R1-202ENST00000400555 CIRBP-AS1Q8TBR5 109 aa7.79□□□□□ -1.16
PPP4R1-202ENST00000400555 hDV103S1A0JD37 113 aa7.78□□□□□ -1.16
PPP4R1-202ENST00000400555 RETNLBQ9BQ08 111 aa7.78□□□□□ -1.16
PPP4R1-202ENST00000400555 NUPR2A6NF83 97 aa7.77□□□□□ -1.17
PPP4R1-202ENST00000400555 HUWE1Q7Z6Z7 4374 aaKnown RBP7.77□□□□□ -1.17
PPP4R1-202ENST00000400555 A8MUN3 132 aa7.76□□□□□ -1.17
PPP4R1-202ENST00000400555 RTL8CO15255 209 aa7.76□□□□□ -1.17
PPP4R1-202ENST00000400555 TRAV22A0A0B4J277 110 aa7.75□□□□□ -1.17
PPP4R1-202ENST00000400555 PSORS1C2Q9UIG4 136 aa7.75□□□□□ -1.17
PPP4R1-202ENST00000400555 IGLV5-52A0A0A0MRZ9 124 aa7.74□□□□□ -1.17
PPP4R1-202ENST00000400555 A0A087WTM6 91 aa7.73□□□□□ -1.17
PPP4R1-202ENST00000400555 FBN3Q75N90 2809 aa7.73□□□□□ -1.17
PPP4R1-202ENST00000400555 LINC00472Q9H8W2 130 aa7.73□□□□□ -1.17
PPP4R1-202ENST00000400555 CHKB-CPT1BH3BT56 60 aa7.71□□□□□ -1.17
PPP4R1-202ENST00000400555 SPTSSBQ8NFR3 76 aa7.71□□□□□ -1.18
PPP4R1-202ENST00000400555 PRR15LQ9BU68 103 aa7.71□□□□□ -1.18
PPP4R1-202ENST00000400555 IGLV8-61A0A075B6I0 122 aa7.7□□□□□ -1.18
PPP4R1-202ENST00000400555 ZCCHC13Q8WW36 166 aaKnown RBP7.7□□□□□ -1.18
PPP4R1-202ENST00000400555 KRTAP29-1A8MX34 341 aaPredicted RBP7.68□□□□□ -1.18
PPP4R1-202ENST00000400555 MMP24-AS1A0A0U1RRL7 71 aa7.67□□□□□ -1.18
PPP4R1-202ENST00000400555 C1orf195Q5TG92 126 aa7.67□□□□□ -1.18
PPP4R1-202ENST00000400555 SPACA4Q8TDM5 124 aa7.67□□□□□ -1.18
PPP4R1-202ENST00000400555 SPAG11AQ6PDA7 123 aa7.66□□□□□ -1.18
PPP4R1-202ENST00000400555 C8orf17Q9NRJ1 99 aa7.66□□□□□ -1.18
PPP4R1-202ENST00000400555 MEGF8Q7Z7M0 2845 aa7.66□□□□□ -1.18
PPP4R1-202ENST00000400555 A0A087X002 238 aa7.66□□□□□ -1.18
PPP4R1-202ENST00000400555 C1orf134Q5TEV5 83 aa7.66□□□□□ -1.18
PPP4R1-202ENST00000400555 NOTCH2NLQ7Z3S9 236 aa7.66□□□□□ -1.18
PPP4R1-202ENST00000400555 ZNF706Q9Y5V0 76 aaPredicted RBP7.65□□□□□ -1.18
PPP4R1-202ENST00000400555 CMYA5Q8N3K9 4069 aa7.65□□□□□ -1.19
PPP4R1-202ENST00000400555 SPRR1BP22528 89 aa7.65□□□□□ -1.19
PPP4R1-202ENST00000400555 Q6ZRN7 208 aaPredicted RBP7.64□□□□□ -1.19
PPP4R1-202ENST00000400555 LCE6AA0A183 80 aa7.64□□□□□ -1.19
PPP4R1-202ENST00000400555 A6NED7 52 aa7.63□□□□□ -1.19
PPP4R1-202ENST00000400555 A8MU10 97 aa7.62□□□□□ -1.19
PPP4R1-202ENST00000400555 ZNF861PO60384 105 aa7.62□□□□□ -1.19
PPP4R1-202ENST00000400555 COA5Q86WW8 74 aa7.62□□□□□ -1.19
PPP4R1-202ENST00000400555 DNAH9Q9NYC9 4486 aa7.62□□□□□ -1.19
PPP4R1-202ENST00000400555 A0A1B0GVX0 72 aa7.61□□□□□ -1.19
PPP4R1-202ENST00000400555 WWC2-AS2Q96NR7 200 aa7.59□□□□□ -1.19
PPP4R1-202ENST00000400555 CYP4F30PQ9H0H9 118 aa7.59□□□□□ -1.19
PPP4R1-202ENST00000400555 MRPL34Q9BQ48 92 aaKnown RBP7.59□□□□□ -1.19
PPP4R1-202ENST00000400555 CD164Q04900 197 aa7.58□□□□□ -1.2
PPP4R1-202ENST00000400555 KRTAP13-1Q8IUC0 172 aa7.57□□□□□ -1.2
PPP4R1-202ENST00000400555 PMAIP1Q13794 54 aa7.57□□□□□ -1.2
PPP4R1-202ENST00000400555 PLECQ15149 4684 aaKnown RBP7.56□□□□□ -1.2
PPP4R1-202ENST00000400555 Q1T7F1 81 aa7.56□□□□□ -1.2
PPP4R1-202ENST00000400555 V9GYY9 64 aa7.56□□□□□ -1.2
PPP4R1-202ENST00000400555 DNAH7Q8WXX0 4024 aa7.56□□□□□ -1.2
PPP4R1-202ENST00000400555 H3BPC8 53 aa7.55□□□□□ -1.2
PPP4R1-202ENST00000400555 Q96NJ1 140 aa7.54□□□□□ -1.2
PPP4R1-202ENST00000400555 TP53AIP1Q9HCN2 124 aa7.54□□□□□ -1.2
PPP4R1-202ENST00000400555 IGLV7-43P04211 117 aa7.54□□□□□ -1.2
PPP4R1-202ENST00000400555 Q8N9P0 234 aaPredicted RBP7.53□□□□□ -1.2
PPP4R1-202ENST00000400555 PRR26Q8N8Z3 221 aa7.52□□□□□ -1.2
PPP4R1-202ENST00000400555 KRTAP10-2P60368 255 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms