RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 A0A087WTM6 91 aa5.73□□□□□ -1.49
PTPRM-202ENST00000400053 C9orf92A6NGG3 77 aa5.73□□□□□ -1.49
PTPRM-202ENST00000400053 HELZ2Q9BYK8 2649 aaKnown RBP5.73□□□□□ -1.49
PTPRM-202ENST00000400053 WIPF1O43516 503 aa5.73□□□□□ -1.49
PTPRM-202ENST00000400053 OCR1Q9BZK8 76 aa5.73□□□□□ -1.49
PTPRM-202ENST00000400053 NOTCH1P46531 2555 aa5.72□□□□□ -1.49
PTPRM-202ENST00000400053 CAMK2N1Q7Z7J9 78 aa5.72□□□□□ -1.49
PTPRM-202ENST00000400053 A0A0D9SG42 100 aa5.72□□□□□ -1.49
PTPRM-202ENST00000400053 DSPP15924 2871 aaKnown RBP5.72□□□□□ -1.49
PTPRM-202ENST00000400053 MAP1AP78559 2803 aaPredicted RBP5.72□□□□□ -1.49
PTPRM-202ENST00000400053 SPRR4Q96PI1 79 aa5.71□□□□□ -1.5
PTPRM-202ENST00000400053 ANAPC11Q9NYG5 84 aa5.71□□□□□ -1.5
PTPRM-202ENST00000400053 STAB1Q9NY15 2570 aa5.71□□□□□ -1.5
PTPRM-202ENST00000400053 KRTAP10-11P60412 298 aa5.7□□□□□ -1.5
PTPRM-202ENST00000400053 PRR26Q8N8Z3 221 aa5.69□□□□□ -1.5
PTPRM-202ENST00000400053 Q5XG85 94 aa5.69□□□□□ -1.5
PTPRM-202ENST00000400053 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
PTPRM-202ENST00000400053 FREM2Q5SZK8 3169 aa5.68□□□□□ -1.5
PTPRM-202ENST00000400053 FRYQ5TBA9 3013 aa5.68□□□□□ -1.5
PTPRM-202ENST00000400053 CNBPP62633 177 aaKnown RBP5.68□□□□□ -1.5
PTPRM-202ENST00000400053 CASC10Q5T4H9 136 aa5.68□□□□□ -1.5
PTPRM-202ENST00000400053 Q6ZSA8 131 aa5.67□□□□□ -1.5
PTPRM-202ENST00000400053 FP248Q71RG6 208 aaPredicted RBP5.66□□□□□ -1.5
PTPRM-202ENST00000400053 PSORS1C2Q9UIG4 136 aa5.66□□□□□ -1.5
PTPRM-202ENST00000400053 UNC79Q9P2D8 2635 aa5.66□□□□□ -1.5
PTPRM-202ENST00000400053 H3BS24 57 aa5.66□□□□□ -1.5
PTPRM-202ENST00000400053 Q8N1X5 172 aa5.66□□□□□ -1.5
PTPRM-202ENST00000400053 A0A1B0GU33 70 aa5.66□□□□□ -1.5
PTPRM-202ENST00000400053 CELSR3Q9NYQ7 3312 aa5.66□□□□□ -1.5
PTPRM-202ENST00000400053 FAM229BQ4G0N7 80 aa5.66□□□□□ -1.5
PTPRM-202ENST00000400053 K7EIL1 84 aa5.65□□□□□ -1.5
PTPRM-202ENST00000400053 FLG2Q5D862 2391 aaPredicted RBP5.65□□□□□ -1.5
PTPRM-202ENST00000400053 NBEAL1Q6ZS30 2694 aa5.65□□□□□ -1.51
PTPRM-202ENST00000400053 TNRC18O15417 2968 aaPredicted RBP5.64□□□□□ -1.51
PTPRM-202ENST00000400053 GCN1Q92616 2671 aaKnown RBP5.63□□□□□ -1.51
PTPRM-202ENST00000400053 HRES1P13985 223 aa5.63□□□□□ -1.51
PTPRM-202ENST00000400053 NBEAQ8NFP9 2946 aa5.63□□□□□ -1.51
PTPRM-202ENST00000400053 SMR3BP02814 79 aaPredicted RBP5.61□□□□□ -1.51
PTPRM-202ENST00000400053 DMAC1Q96GE9 116 aa5.61□□□□□ -1.51
PTPRM-202ENST00000400053 IGLV7-46A0A075B6I9 117 aa5.61□□□□□ -1.51
PTPRM-202ENST00000400053 CSAG1Q6PB30 78 aa5.6□□□□□ -1.51
PTPRM-202ENST00000400053 COL6A5A8TX70 2615 aa5.6□□□□□ -1.51
PTPRM-202ENST00000400053 OXTP01178 125 aa5.6□□□□□ -1.51
PTPRM-202ENST00000400053 Q8NDZ9 215 aa5.6□□□□□ -1.51
PTPRM-202ENST00000400053 TEX15Q9BXT5 2789 aa5.6□□□□□ -1.51
PTPRM-202ENST00000400053 IGSF10Q6WRI0 2623 aa5.59□□□□□ -1.51
PTPRM-202ENST00000400053 Q75L30 129 aa5.59□□□□□ -1.51
PTPRM-202ENST00000400053 TEP1Q99973 2627 aaKnown RBP5.59□□□□□ -1.51
PTPRM-202ENST00000400053 Q8N9P0 234 aaPredicted RBP5.58□□□□□ -1.52
PTPRM-202ENST00000400053 NBEAL2Q6ZNJ1 2754 aa5.58□□□□□ -1.52
PTPRM-202ENST00000400053 M0R2T5 61 aa5.56□□□□□ -1.52
PTPRM-202ENST00000400053 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
PTPRM-202ENST00000400053 LINC01558Q9Y6Z2 57 aa5.56□□□□□ -1.52
PTPRM-202ENST00000400053 DMBT1Q9UGM3 2413 aaPredicted RBP5.55□□□□□ -1.52
PTPRM-202ENST00000400053 TNP2Q05952 138 aa5.54□□□□□ -1.52
PTPRM-202ENST00000400053 ADGRG4Q8IZF6 3080 aa5.54□□□□□ -1.52
PTPRM-202ENST00000400053 ASPMQ8IZT6 3477 aa5.54□□□□□ -1.52
PTPRM-202ENST00000400053 Q5VV11 94 aa5.53□□□□□ -1.52
PTPRM-202ENST00000400053 LOC400499M0QZD8 3231 aa5.52□□□□□ -1.53
PTPRM-202ENST00000400053 SETXQ7Z333 2677 aaKnown RBP5.52□□□□□ -1.53
PTPRM-202ENST00000400053 CFAP47Q6ZTR5 3102 aa5.52□□□□□ -1.53
PTPRM-202ENST00000400053 KALRNO60229 2985 aa5.52□□□□□ -1.53
PTPRM-202ENST00000400053 ZCCHC13Q8WW36 166 aaKnown RBP5.52□□□□□ -1.53
PTPRM-202ENST00000400053 FLNCQ14315 2725 aa5.52□□□□□ -1.53
PTPRM-202ENST00000400053 BOD1L1Q8NFC6 3051 aa5.51□□□□□ -1.53
PTPRM-202ENST00000400053 STAB2Q8WWQ8 2551 aa5.51□□□□□ -1.53
PTPRM-202ENST00000400053 ATMQ13315 3056 aa5.5□□□□□ -1.53
PTPRM-202ENST00000400053 BAHCC1Q9P281 2608 aa5.5□□□□□ -1.53
PTPRM-202ENST00000400053 MMP24-AS1A0A0U1RRL7 71 aa5.49□□□□□ -1.53
PTPRM-202ENST00000400053 S4R3F8 94 aa5.49□□□□□ -1.53
PTPRM-202ENST00000400053 UBR5O95071 2799 aaPredicted RBP5.49□□□□□ -1.53
PTPRM-202ENST00000400053 R4GN34 69 aa5.49□□□□□ -1.53
PTPRM-202ENST00000400053 SPINK7P58062 85 aa5.48□□□□□ -1.53
PTPRM-202ENST00000400053 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.48□□□□□ -1.53
PTPRM-202ENST00000400053 SEC61BP60468 96 aaKnown RBP5.47□□□□□ -1.53
PTPRM-202ENST00000400053 DMXL2Q8TDJ6 3036 aa5.47□□□□□ -1.53
PTPRM-202ENST00000400053 SPRR1AP35321 89 aa5.45□□□□□ -1.54
PTPRM-202ENST00000400053 LAMA5O15230 3695 aa5.44□□□□□ -1.54
PTPRM-202ENST00000400053 RPL37P61927 97 aaKnown RBP5.44□□□□□ -1.54
PTPRM-202ENST00000400053 LRBAP50851 2863 aa5.44□□□□□ -1.54
PTPRM-202ENST00000400053 COL12A1Q99715 3063 aa5.43□□□□□ -1.54
PTPRM-202ENST00000400053 ITPR1Q14643 2758 aa5.43□□□□□ -1.54
PTPRM-202ENST00000400053 KRTAP26-1Q6PEX3 210 aa5.43□□□□□ -1.54
PTPRM-202ENST00000400053 ZFHX4Q86UP3 3567 aa5.43□□□□□ -1.54
PTPRM-202ENST00000400053 LINC00472Q9H8W2 130 aa5.43□□□□□ -1.54
PTPRM-202ENST00000400053 NSD1Q96L73 2696 aaPredicted RBP5.42□□□□□ -1.54
PTPRM-202ENST00000400053 PLAC8Q9NZF1 115 aa5.42□□□□□ -1.54
PTPRM-202ENST00000400053 SPRR1BP22528 89 aa5.41□□□□□ -1.54
PTPRM-202ENST00000400053 SPENQ96T58 3664 aaKnown RBP5.41□□□□□ -1.54
PTPRM-202ENST00000400053 ASH1LQ9NR48 2969 aaKnown RBP5.41□□□□□ -1.54
PTPRM-202ENST00000400053 ROMO1P60602 79 aa5.4□□□□□ -1.54
PTPRM-202ENST00000400053 DMXL1Q9Y485 3027 aa5.4□□□□□ -1.54
PTPRM-202ENST00000400053 ASB16-AS1Q495Z4 193 aa5.4□□□□□ -1.55
PTPRM-202ENST00000400053 Q5W150 140 aa5.4□□□□□ -1.55
PTPRM-202ENST00000400053 TACC2O95359 2948 aa5.39□□□□□ -1.55
PTPRM-202ENST00000400053 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
PTPRM-202ENST00000400053 DCHS1Q96JQ0 3298 aa5.37□□□□□ -1.55
PTPRM-202ENST00000400053 UTP20O75691 2785 aaKnown RBP5.35□□□□□ -1.55
PTPRM-202ENST00000400053 ZZEF1O43149 2961 aa5.34□□□□□ -1.55
PTPRM-202ENST00000400053 H1FX-AS1Q4G0G2 97 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms