RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 NUPR2A6NF83 97 aa9.51□□□□□ -0.89
RPRD1A-202ENST00000399022 IGFL1Q6UW32 110 aa9.5□□□□□ -0.89
RPRD1A-202ENST00000399022 DNAH10OSP0CZ25 163 aa9.5□□□□□ -0.89
RPRD1A-202ENST00000399022 CHTF8P0CG12 524 aa9.49□□□□□ -0.89
RPRD1A-202ENST00000399022 ZNF706Q9Y5V0 76 aaPredicted RBP9.49□□□□□ -0.89
RPRD1A-202ENST00000399022 IGLV1-50A0A075B6I6 118 aa9.49□□□□□ -0.89
RPRD1A-202ENST00000399022 A0A1B0GU69 56 aa9.49□□□□□ -0.89
RPRD1A-202ENST00000399022 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
RPRD1A-202ENST00000399022 MXRA5Q9NR99 2828 aa9.48□□□□□ -0.89
RPRD1A-202ENST00000399022 A8MWP4 228 aa9.47□□□□□ -0.89
RPRD1A-202ENST00000399022 IGLV5-48A0A075B6I7 105 aa9.47□□□□□ -0.89
RPRD1A-202ENST00000399022 CSMD1Q96PZ7 3565 aa9.47□□□□□ -0.89
RPRD1A-202ENST00000399022 PHF5AQ7RTV0 110 aaKnown RBP9.47□□□□□ -0.89
RPRD1A-202ENST00000399022 SPINK1P00995 79 aa9.46□□□□□ -0.9
RPRD1A-202ENST00000399022 MDFIQ99750 246 aa9.46□□□□□ -0.9
RPRD1A-202ENST00000399022 CASC10Q5T4H9 136 aa9.45□□□□□ -0.9
RPRD1A-202ENST00000399022 C7orf65Q6ZTY9 151 aa9.45□□□□□ -0.9
RPRD1A-202ENST00000399022 CIRBP-AS1Q8TBR5 109 aa9.45□□□□□ -0.9
RPRD1A-202ENST00000399022 K7EIL1 84 aa9.45□□□□□ -0.9
RPRD1A-202ENST00000399022 DSCR10P59022 87 aa9.45□□□□□ -0.9
RPRD1A-202ENST00000399022 K7ERS5 55 aa9.45□□□□□ -0.9
RPRD1A-202ENST00000399022 HIVEP1P15822 2718 aa9.44□□□□□ -0.9
RPRD1A-202ENST00000399022 ACYP2P14621 99 aa9.43□□□□□ -0.9
RPRD1A-202ENST00000399022 C8orf87E5RJ46 101 aa9.42□□□□□ -0.9
RPRD1A-202ENST00000399022 RBM12B-AS1Q9P1G2 102 aa9.42□□□□□ -0.9
RPRD1A-202ENST00000399022 CELSR1Q9NYQ6 3014 aa9.41□□□□□ -0.9
RPRD1A-202ENST00000399022 IGLV5-52A0A0A0MRZ9 124 aa9.41□□□□□ -0.9
RPRD1A-202ENST00000399022 SPANXA2-OT1Q8N9U9 137 aa9.39□□□□□ -0.91
RPRD1A-202ENST00000399022 LCA10Q71F78 164 aa9.39□□□□□ -0.91
RPRD1A-202ENST00000399022 NIPBLQ6KC79 2804 aaeCLIP9.38□□□□□ -0.91
RPRD1A-202ENST00000399022 C16orf90A8MZG2 172 aa9.38□□□□□ -0.91
RPRD1A-202ENST00000399022 CDC42SE1Q9NRR8 79 aa9.37□□□□□ -0.91
RPRD1A-202ENST00000399022 BAHCC1Q9P281 2608 aa9.37□□□□□ -0.91
RPRD1A-202ENST00000399022 IGLV8-61A0A075B6I0 122 aa9.36□□□□□ -0.91
RPRD1A-202ENST00000399022 MOBPQ13875 183 aa9.36□□□□□ -0.91
RPRD1A-202ENST00000399022 Q8N9P0 234 aaPredicted RBP9.36□□□□□ -0.91
RPRD1A-202ENST00000399022 NBDYA0A0U1RRE5 68 aa9.35□□□□□ -0.91
RPRD1A-202ENST00000399022 IGKV2D-30A0A075B6S6 120 aa9.34□□□□□ -0.91
RPRD1A-202ENST00000399022 IGKV2-30P06310 120 aa9.34□□□□□ -0.91
RPRD1A-202ENST00000399022 C1orf134Q5TEV5 83 aa9.34□□□□□ -0.91
RPRD1A-202ENST00000399022 Q5VV11 94 aa9.34□□□□□ -0.91
RPRD1A-202ENST00000399022 SVEP1Q4LDE5 3571 aa9.33□□□□□ -0.92
RPRD1A-202ENST00000399022 SPRR4Q96PI1 79 aa9.33□□□□□ -0.92
RPRD1A-202ENST00000399022 MRPL34Q9BQ48 92 aaKnown RBP9.31□□□□□ -0.92
RPRD1A-202ENST00000399022 C8orf17Q9NRJ1 99 aa9.3□□□□□ -0.92
RPRD1A-202ENST00000399022 PRR26Q8N8Z3 221 aa9.28□□□□□ -0.92
RPRD1A-202ENST00000399022 PLA2G2DQ9UNK4 145 aa9.27□□□□□ -0.93
RPRD1A-202ENST00000399022 TLX1NBP0CAT3 122 aa9.26□□□□□ -0.93
RPRD1A-202ENST00000399022 Q75L30 129 aa9.26□□□□□ -0.93
RPRD1A-202ENST00000399022 UQCR11O14957 56 aa9.25□□□□□ -0.93
RPRD1A-202ENST00000399022 RTL8CO15255 209 aa9.23□□□□□ -0.93
RPRD1A-202ENST00000399022 IGLV7-46A0A075B6I9 117 aa9.21□□□□□ -0.93
RPRD1A-202ENST00000399022 MIR22HGQ0VDD5 57 aa9.21□□□□□ -0.93
RPRD1A-202ENST00000399022 CUBNO60494 3623 aa9.21□□□□□ -0.94
RPRD1A-202ENST00000399022 KMT2BQ9UMN6 2715 aaPredicted RBP9.2□□□□□ -0.94
RPRD1A-202ENST00000399022 A0A1B0GVX0 72 aa9.2□□□□□ -0.94
RPRD1A-202ENST00000399022 STAB2Q8WWQ8 2551 aa9.2□□□□□ -0.94
RPRD1A-202ENST00000399022 PRAC1Q96KF2 57 aa9.19□□□□□ -0.94
RPRD1A-202ENST00000399022 CNBPP62633 177 aaKnown RBP9.19□□□□□ -0.94
RPRD1A-202ENST00000399022 C9orf163Q8N9P6 203 aa9.18□□□□□ -0.94
RPRD1A-202ENST00000399022 ANAPC11Q9NYG5 84 aa9.15□□□□□ -0.94
RPRD1A-202ENST00000399022 LINC00313P59037 77 aa9.15□□□□□ -0.94
RPRD1A-202ENST00000399022 IGLV5-37A0A075B6J1 123 aa9.15□□□□□ -0.94
RPRD1A-202ENST00000399022 LINC01558Q9Y6Z2 57 aa9.15□□□□□ -0.94
RPRD1A-202ENST00000399022 APLNQ9ULZ1 77 aa9.15□□□□□ -0.95
RPRD1A-202ENST00000399022 SPINK7P58062 85 aa9.14□□□□□ -0.95
RPRD1A-202ENST00000399022 ZCCHC13Q8WW36 166 aaKnown RBP9.13□□□□□ -0.95
RPRD1A-202ENST00000399022 FAM229AH3BQW9 127 aa9.13□□□□□ -0.95
RPRD1A-202ENST00000399022 A8MU10 97 aa9.12□□□□□ -0.95
RPRD1A-202ENST00000399022 KRTAP26-1Q6PEX3 210 aa9.12□□□□□ -0.95
RPRD1A-202ENST00000399022 SPRR1AP35321 89 aa9.11□□□□□ -0.95
RPRD1A-202ENST00000399022 SPACA4Q8TDM5 124 aa9.11□□□□□ -0.95
RPRD1A-202ENST00000399022 A0A087WTM6 91 aa9.1□□□□□ -0.95
RPRD1A-202ENST00000399022 LINC01554Q52M75 96 aa9.09□□□□□ -0.95
RPRD1A-202ENST00000399022 MMP24-AS1A0A0U1RRL7 71 aa9.08□□□□□ -0.96
RPRD1A-202ENST00000399022 SPENQ96T58 3664 aaKnown RBP9.08□□□□□ -0.96
RPRD1A-202ENST00000399022 TNP2Q05952 138 aa9.07□□□□□ -0.96
RPRD1A-202ENST00000399022 H3BS24 57 aa9.07□□□□□ -0.96
RPRD1A-202ENST00000399022 HRES1P13985 223 aa9.06□□□□□ -0.96
RPRD1A-202ENST00000399022 KRTAP1-5Q9BYS1 174 aa9.05□□□□□ -0.96
RPRD1A-202ENST00000399022 PSORS1C2Q9UIG4 136 aa9.03□□□□□ -0.96
RPRD1A-202ENST00000399022 LINC00472Q9H8W2 130 aa9.02□□□□□ -0.97
RPRD1A-202ENST00000399022 SSBP3-AS1Q7Z2R9 100 aa9.01□□□□□ -0.97
RPRD1A-202ENST00000399022 ZNF861PO60384 105 aa9.01□□□□□ -0.97
RPRD1A-202ENST00000399022 TENM1Q9UKZ4 2725 aa9□□□□□ -0.97
RPRD1A-202ENST00000399022 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9□□□□□ -0.97
RPRD1A-202ENST00000399022 TENM4Q6N022 2769 aa8.99□□□□□ -0.97
RPRD1A-202ENST00000399022 LCE6AA0A183 80 aa8.98□□□□□ -0.97
RPRD1A-202ENST00000399022 KRTAP29-1A8MX34 341 aaPredicted RBP8.97□□□□□ -0.97
RPRD1A-202ENST00000399022 SPINT4Q6UDR6 99 aa8.97□□□□□ -0.97
RPRD1A-202ENST00000399022 VWFP04275 2813 aa8.97□□□□□ -0.97
RPRD1A-202ENST00000399022 KRTAP4-16G5E9R7 235 aaPredicted RBP8.95□□□□□ -0.98
RPRD1A-202ENST00000399022 TENM3Q9P273 2699 aa8.95□□□□□ -0.98
RPRD1A-202ENST00000399022 Q96NJ1 140 aa8.94□□□□□ -0.98
RPRD1A-202ENST00000399022 WWC2-AS2Q96NR7 200 aa8.94□□□□□ -0.98
RPRD1A-202ENST00000399022 CSMD2Q7Z408 3487 aa8.93□□□□□ -0.98
RPRD1A-202ENST00000399022 TYMSOSQ8TAI1 123 aa8.92□□□□□ -0.98
RPRD1A-202ENST00000399022 A6NN06 94 aa8.92□□□□□ -0.98
RPRD1A-202ENST00000399022 CSAG1Q6PB30 78 aa8.91□□□□□ -0.98
RPRD1A-202ENST00000399022 BSNQ9UPA5 3926 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms