RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.66□□□□□ -0.54
CHRFAM7A-202ENST00000397827 REG3GQ6UW15 175 aa11.65□□□□□ -0.54
CHRFAM7A-202ENST00000397827 IGKV4-1P06312 121 aa11.64□□□□□ -0.55
CHRFAM7A-202ENST00000397827 C1orf64Q8NEQ6 169 aa11.64□□□□□ -0.55
CHRFAM7A-202ENST00000397827 APLNQ9ULZ1 77 aa11.64□□□□□ -0.55
CHRFAM7A-202ENST00000397827 A0A1W2PNN7 141 aa11.63□□□□□ -0.55
CHRFAM7A-202ENST00000397827 A0A1W2PNM2 257 aa11.62□□□□□ -0.55
CHRFAM7A-202ENST00000397827 TNP2Q05952 138 aa11.62□□□□□ -0.55
CHRFAM7A-202ENST00000397827 C1orf137Q5JT78 98 aa11.62□□□□□ -0.55
CHRFAM7A-202ENST00000397827 MDFIQ99750 246 aa11.62□□□□□ -0.55
CHRFAM7A-202ENST00000397827 TRAV22A0A0B4J277 110 aa11.61□□□□□ -0.55
CHRFAM7A-202ENST00000397827 C16orf90A8MZG2 172 aa11.61□□□□□ -0.55
CHRFAM7A-202ENST00000397827 PLECQ15149 4684 aaKnown RBP11.6□□□□□ -0.55
CHRFAM7A-202ENST00000397827 CNBPP62633 177 aaKnown RBP11.6□□□□□ -0.55
CHRFAM7A-202ENST00000397827 A8MU10 97 aa11.59□□□□□ -0.55
CHRFAM7A-202ENST00000397827 PRLHP81277 87 aa11.59□□□□□ -0.55
CHRFAM7A-202ENST00000397827 FAM30AQ9NZY2 134 aa11.59□□□□□ -0.55
CHRFAM7A-202ENST00000397827 CHTF8P0CG12 524 aa11.58□□□□□ -0.56
CHRFAM7A-202ENST00000397827 DYNC2H1Q8NCM8 4307 aaKnown RBP11.56□□□□□ -0.56
CHRFAM7A-202ENST00000397827 SRRM2Q9UQ35 2752 aaKnown RBP11.56□□□□□ -0.56
CHRFAM7A-202ENST00000397827 A0A0G2JQZ4 141 aa11.56□□□□□ -0.56
CHRFAM7A-202ENST00000397827 SMIM29Q86T20 159 aa11.55□□□□□ -0.56
CHRFAM7A-202ENST00000397827 Q8NBF4 154 aa11.55□□□□□ -0.56
CHRFAM7A-202ENST00000397827 A8MUN3 132 aa11.55□□□□□ -0.56
CHRFAM7A-202ENST00000397827 PRR4Q16378 134 aa11.54□□□□□ -0.56
CHRFAM7A-202ENST00000397827 B9D2Q9BPU9 175 aa11.54□□□□□ -0.56
CHRFAM7A-202ENST00000397827 KRTAP11-1Q8IUC1 163 aa11.52□□□□□ -0.56
CHRFAM7A-202ENST00000397827 PHF5AQ7RTV0 110 aaKnown RBP11.52□□□□□ -0.57
CHRFAM7A-202ENST00000397827 LINC00476Q8WZB0 136 aa11.51□□□□□ -0.57
CHRFAM7A-202ENST00000397827 SPRR4Q96PI1 79 aa11.5□□□□□ -0.57
CHRFAM7A-202ENST00000397827 RBM12B-AS1Q9P1G2 102 aa11.5□□□□□ -0.57
CHRFAM7A-202ENST00000397827 C14orf177Q52M58 125 aa11.49□□□□□ -0.57
CHRFAM7A-202ENST00000397827 A0A1B0GW54 56 aa11.48□□□□□ -0.57
CHRFAM7A-202ENST00000397827 NBDYA0A0U1RRE5 68 aa11.46□□□□□ -0.57
CHRFAM7A-202ENST00000397827 IGFL1Q6UW32 110 aa11.45□□□□□ -0.58
CHRFAM7A-202ENST00000397827 KTN1-AS1Q86SY8 53 aa11.45□□□□□ -0.58
CHRFAM7A-202ENST00000397827 C9orf163Q8N9P6 203 aa11.45□□□□□ -0.58
CHRFAM7A-202ENST00000397827 STARD9Q9P2P6 4700 aa11.44□□□□□ -0.58
CHRFAM7A-202ENST00000397827 PRKDCP78527 4128 aaKnown RBP11.43□□□□□ -0.58
CHRFAM7A-202ENST00000397827 LCE6AA0A183 80 aa11.43□□□□□ -0.58
CHRFAM7A-202ENST00000397827 PANO1I0J062 215 aa11.43□□□□□ -0.58
CHRFAM7A-202ENST00000397827 Q5VV11 94 aa11.43□□□□□ -0.58
CHRFAM7A-202ENST00000397827 SPTSSBQ8NFR3 76 aa11.42□□□□□ -0.58
CHRFAM7A-202ENST00000397827 ZCCHC13Q8WW36 166 aaKnown RBP11.42□□□□□ -0.58
CHRFAM7A-202ENST00000397827 DSCR10P59022 87 aa11.42□□□□□ -0.58
CHRFAM7A-202ENST00000397827 NUPR2A6NF83 97 aa11.41□□□□□ -0.58
CHRFAM7A-202ENST00000397827 Q6ZRN7 208 aaPredicted RBP11.4□□□□□ -0.58
CHRFAM7A-202ENST00000397827 CHKB-CPT1BH3BT56 60 aa11.4□□□□□ -0.58
CHRFAM7A-202ENST00000397827 K7EQZ3 153 aa11.4□□□□□ -0.58
CHRFAM7A-202ENST00000397827 UBE2AP49459 152 aa11.4□□□□□ -0.58
CHRFAM7A-202ENST00000397827 DEFB116Q30KQ4 102 aa11.39□□□□□ -0.59
CHRFAM7A-202ENST00000397827 CYP4F30PQ9H0H9 118 aa11.39□□□□□ -0.59
CHRFAM7A-202ENST00000397827 A0A087WSZ3 146 aa11.37□□□□□ -0.59
CHRFAM7A-202ENST00000397827 VPS13DQ5THJ4 4388 aa11.35□□□□□ -0.59
CHRFAM7A-202ENST00000397827 IGLV8-61A0A075B6I0 122 aa11.35□□□□□ -0.59
CHRFAM7A-202ENST00000397827 H0Y9J4 135 aa11.33□□□□□ -0.6
CHRFAM7A-202ENST00000397827 HCG22E2RYF7 251 aa11.32□□□□□ -0.6
CHRFAM7A-202ENST00000397827 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.32□□□□□ -0.6
CHRFAM7A-202ENST00000397827 KMT2AQ03164 3969 aa11.31□□□□□ -0.6
CHRFAM7A-202ENST00000397827 PRR15LQ9BU68 103 aa11.3□□□□□ -0.6
CHRFAM7A-202ENST00000397827 MEGF8Q7Z7M0 2845 aa11.29□□□□□ -0.6
CHRFAM7A-202ENST00000397827 SPRR1BP22528 89 aa11.28□□□□□ -0.6
CHRFAM7A-202ENST00000397827 Q8N9P0 234 aaPredicted RBP11.28□□□□□ -0.6
CHRFAM7A-202ENST00000397827 RPL37AP61513 92 aaKnown RBP11.27□□□□□ -0.61
CHRFAM7A-202ENST00000397827 LCA10Q71F78 164 aa11.27□□□□□ -0.61
CHRFAM7A-202ENST00000397827 DNAH2Q9P225 4427 aa11.26□□□□□ -0.61
CHRFAM7A-202ENST00000397827 NDUFS5O43920 106 aa11.26□□□□□ -0.61
CHRFAM7A-202ENST00000397827 ATP11AUNQ6ZP68 121 aa11.26□□□□□ -0.61
CHRFAM7A-202ENST00000397827 A0A087WTM6 91 aa11.26□□□□□ -0.61
CHRFAM7A-202ENST00000397827 C4orf48Q5BLP8 95 aa11.26□□□□□ -0.61
CHRFAM7A-202ENST00000397827 SPACA4Q8TDM5 124 aa11.26□□□□□ -0.61
CHRFAM7A-202ENST00000397827 LIMD2Q9BT23 127 aa11.25□□□□□ -0.61
CHRFAM7A-202ENST00000397827 NDUFB1O75438 58 aa11.25□□□□□ -0.61
CHRFAM7A-202ENST00000397827 KRTAP13-1Q8IUC0 172 aa11.25□□□□□ -0.61
CHRFAM7A-202ENST00000397827 HECTD4Q9Y4D8 3996 aa11.24□□□□□ -0.61
CHRFAM7A-202ENST00000397827 WFDC13Q8IUB5 93 aa11.23□□□□□ -0.61
CHRFAM7A-202ENST00000397827 A6NED7 52 aa11.22□□□□□ -0.61
CHRFAM7A-202ENST00000397827 A6NN06 94 aa11.22□□□□□ -0.61
CHRFAM7A-202ENST00000397827 DNHD1Q96M86 4753 aa11.22□□□□□ -0.61
CHRFAM7A-202ENST00000397827 TGP01266 2768 aa11.22□□□□□ -0.61
CHRFAM7A-202ENST00000397827 LINC00208Q96KT6 92 aa11.2□□□□□ -0.62
CHRFAM7A-202ENST00000397827 FRAS1Q86XX4 4008 aa11.19□□□□□ -0.62
CHRFAM7A-202ENST00000397827 RTL8CO15255 209 aa11.18□□□□□ -0.62
CHRFAM7A-202ENST00000397827 IGLV9-49A0A0B4J1Y8 123 aa11.17□□□□□ -0.62
CHRFAM7A-202ENST00000397827 MP68P56378 58 aa11.17□□□□□ -0.62
CHRFAM7A-202ENST00000397827 LINC00472Q9H8W2 130 aa11.15□□□□□ -0.62
CHRFAM7A-202ENST00000397827 DNAH17Q9UFH2 4485 aa11.14□□□□□ -0.63
CHRFAM7A-202ENST00000397827 Q6ZR54 194 aa11.14□□□□□ -0.63
CHRFAM7A-202ENST00000397827 Q75L30 129 aa11.14□□□□□ -0.63
CHRFAM7A-202ENST00000397827 FBN3Q75N90 2809 aa11.14□□□□□ -0.63
CHRFAM7A-202ENST00000397827 C7orf65Q6ZTY9 151 aa11.13□□□□□ -0.63
CHRFAM7A-202ENST00000397827 DNAH8Q96JB1 4490 aa11.13□□□□□ -0.63
CHRFAM7A-202ENST00000397827 PSORS1C2Q9UIG4 136 aa11.12□□□□□ -0.63
CHRFAM7A-202ENST00000397827 A8MWP4 228 aa11.1□□□□□ -0.63
CHRFAM7A-202ENST00000397827 KRTAP29-1A8MX34 341 aaPredicted RBP11.1□□□□□ -0.63
CHRFAM7A-202ENST00000397827 ANAPC11Q9NYG5 84 aa11.09□□□□□ -0.63
CHRFAM7A-202ENST00000397827 C8orf87E5RJ46 101 aa11.09□□□□□ -0.63
CHRFAM7A-202ENST00000397827 CDC42SE1Q9NRR8 79 aa11.09□□□□□ -0.63
CHRFAM7A-202ENST00000397827 IGLV5-52A0A0A0MRZ9 124 aa11.08□□□□□ -0.64
CHRFAM7A-202ENST00000397827 CASC2Q6XLA1 102 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms