RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 HCG22E2RYF7 251 aa3.29□□□□□ -1.88
SSR1-202ENST00000397511 C3orf84H3BNL1 204 aa3.29□□□□□ -1.88
SSR1-202ENST00000397511 ZNF73O43830 326 aaPredicted RBP3.29□□□□□ -1.88
SSR1-202ENST00000397511 RPL37AP8A6NKH3 93 aa3.29□□□□□ -1.88
SSR1-202ENST00000397511 ELOF1P60002 83 aaKnown RBP3.29□□□□□ -1.88
SSR1-202ENST00000397511 PHF5AQ7RTV0 110 aaKnown RBP3.29□□□□□ -1.88
SSR1-202ENST00000397511 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.29□□□□□ -1.88
SSR1-202ENST00000397511 DEFB131BA0A096LNP1 70 aa3.29□□□□□ -1.88
SSR1-202ENST00000397511 KRTAP9-6A0A140TA67 174 aa3.28□□□□□ -1.88
SSR1-202ENST00000397511 Q75L30 129 aa3.28□□□□□ -1.88
SSR1-202ENST00000397511 PRR15LQ9BU68 103 aa3.28□□□□□ -1.88
SSR1-202ENST00000397511 KRTAP9-2Q9BYQ4 174 aa3.28□□□□□ -1.88
SSR1-202ENST00000397511 FAM168BA1KXE4 195 aa3.28□□□□□ -1.88
SSR1-202ENST00000397511 C15orf56Q8N910 161 aa3.28□□□□□ -1.88
SSR1-202ENST00000397511 B9D2Q9BPU9 175 aa3.28□□□□□ -1.88
SSR1-202ENST00000397511 A6NED7 52 aa3.27□□□□□ -1.89
SSR1-202ENST00000397511 A6NN06 94 aa3.27□□□□□ -1.89
SSR1-202ENST00000397511 CASC10Q5T4H9 136 aa3.27□□□□□ -1.89
SSR1-202ENST00000397511 C7orf65Q6ZTY9 151 aa3.27□□□□□ -1.89
SSR1-202ENST00000397511 KRTAP4-8Q9BYQ9 185 aa3.27□□□□□ -1.89
SSR1-202ENST00000397511 DNAH7Q8WXX0 4024 aa3.27□□□□□ -1.89
SSR1-202ENST00000397511 Q8N9P0 234 aaPredicted RBP3.27□□□□□ -1.89
SSR1-202ENST00000397511 A0A1B0GW54 56 aa3.27□□□□□ -1.89
SSR1-202ENST00000397511 KRTAP24-1Q3LI83 254 aa3.27□□□□□ -1.89
SSR1-202ENST00000397511 MP68P56378 58 aa3.26□□□□□ -1.89
SSR1-202ENST00000397511 LINC00208Q96KT6 92 aa3.26□□□□□ -1.89
SSR1-202ENST00000397511 LCA10Q71F78 164 aa3.25□□□□□ -1.89
SSR1-202ENST00000397511 LINC00528Q8N1L1 170 aa3.25□□□□□ -1.89
SSR1-202ENST00000397511 NKAPP1Q8N9T2 125 aa3.25□□□□□ -1.89
SSR1-202ENST00000397511 ST20-AS1Q8NBB2 130 aa3.25□□□□□ -1.89
SSR1-202ENST00000397511 KRTAP26-1Q6PEX3 210 aa3.25□□□□□ -1.89
SSR1-202ENST00000397511 DNAH9Q9NYC9 4486 aa3.25□□□□□ -1.89
SSR1-202ENST00000397511 A0A0G2JQZ4 141 aa3.25□□□□□ -1.89
SSR1-202ENST00000397511 A0A1W2PNN7 141 aa3.25□□□□□ -1.89
SSR1-202ENST00000397511 C8orf87E5RJ46 101 aa3.25□□□□□ -1.89
SSR1-202ENST00000397511 Q9BRP9 147 aa3.25□□□□□ -1.89
SSR1-202ENST00000397511 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
SSR1-202ENST00000397511 EGFEM1PQ0D2K5 195 aa3.24□□□□□ -1.89
SSR1-202ENST00000397511 SPANXA2-OT1Q8N9U9 137 aa3.24□□□□□ -1.89
SSR1-202ENST00000397511 GVQW2A0A096LPI5 108 aaPredicted RBP3.24□□□□□ -1.89
SSR1-202ENST00000397511 HUWE1Q7Z6Z7 4374 aaKnown RBP3.24□□□□□ -1.89
SSR1-202ENST00000397511 IGKV2-24A0A0C4DH68 120 aa3.23□□□□□ -1.89
SSR1-202ENST00000397511 C7orf33Q8WU49 177 aa3.23□□□□□ -1.89
SSR1-202ENST00000397511 LOC101927531A0A1B0GV80 90 aa3.23□□□□□ -1.89
SSR1-202ENST00000397511 K7EQZ3 153 aa3.23□□□□□ -1.89
SSR1-202ENST00000397511 IGLV5-48A0A075B6I7 105 aa3.23□□□□□ -1.89
SSR1-202ENST00000397511 KCNQ1DNQ9H478 68 aa3.23□□□□□ -1.89
SSR1-202ENST00000397511 DSCR10P59022 87 aa3.22□□□□□ -1.89
SSR1-202ENST00000397511 LCE3BQ5TA77 95 aa3.22□□□□□ -1.89
SSR1-202ENST00000397511 LINC01556Q5JQF7 62 aa3.22□□□□□ -1.89
SSR1-202ENST00000397511 A0A1W2PNM2 257 aa3.21□□□□□ -1.89
SSR1-202ENST00000397511 H3BPC8 53 aa3.21□□□□□ -1.89
SSR1-202ENST00000397511 DEFB116Q30KQ4 102 aa3.21□□□□□ -1.89
SSR1-202ENST00000397511 MOBPQ13875 183 aa3.21□□□□□ -1.9
SSR1-202ENST00000397511 C1orf137Q5JT78 98 aa3.21□□□□□ -1.9
SSR1-202ENST00000397511 Q8NBF4 154 aa3.21□□□□□ -1.9
SSR1-202ENST00000397511 KRTAP17-1Q9BYP8 105 aa3.21□□□□□ -1.9
SSR1-202ENST00000397511 Q8N377 158 aa3.21□□□□□ -1.9
SSR1-202ENST00000397511 DNAH1Q9P2D7 4330 aa3.2□□□□□ -1.9
SSR1-202ENST00000397511 H3BNG1 76 aa3.2□□□□□ -1.9
SSR1-202ENST00000397511 H0Y9P7 68 aa3.19□□□□□ -1.9
SSR1-202ENST00000397511 PRLHP81277 87 aa3.19□□□□□ -1.9
SSR1-202ENST00000397511 COA5Q86WW8 74 aa3.19□□□□□ -1.9
SSR1-202ENST00000397511 WFDC13Q8IUB5 93 aa3.19□□□□□ -1.9
SSR1-202ENST00000397511 KRTAP7-1Q8IUC3 87 aa3.19□□□□□ -1.9
SSR1-202ENST00000397511 DNAH3Q8TD57 4116 aa3.19□□□□□ -1.9
SSR1-202ENST00000397511 A0A096LNI7 61 aa3.19□□□□□ -1.9
SSR1-202ENST00000397511 SPRR4Q96PI1 79 aa3.19□□□□□ -1.9
SSR1-202ENST00000397511 DNAH10OSP0CZ25 163 aa3.19□□□□□ -1.9
SSR1-202ENST00000397511 Q6ZRX8 168 aa3.18□□□□□ -1.9
SSR1-202ENST00000397511 DHRS4-AS1Q9P1J3 65 aa3.18□□□□□ -1.9
SSR1-202ENST00000397511 CHTF8P0CG12 524 aa3.18□□□□□ -1.9
SSR1-202ENST00000397511 CASC2Q6XLA1 102 aa3.18□□□□□ -1.9
SSR1-202ENST00000397511 KRTAP1-5Q9BYS1 174 aa3.18□□□□□ -1.9
SSR1-202ENST00000397511 LINC01558Q9Y6Z2 57 aa3.18□□□□□ -1.9
SSR1-202ENST00000397511 TGP01266 2768 aa3.18□□□□□ -1.9
SSR1-202ENST00000397511 FRAS1Q86XX4 4008 aa3.17□□□□□ -1.9
SSR1-202ENST00000397511 IGLV1-50A0A075B6I6 118 aa3.17□□□□□ -1.9
SSR1-202ENST00000397511 K7EIL1 84 aa3.17□□□□□ -1.9
SSR1-202ENST00000397511 PLECQ15149 4684 aaKnown RBP3.17□□□□□ -1.9
SSR1-202ENST00000397511 UBE2DNLQ8IWF7 75 aa3.17□□□□□ -1.9
SSR1-202ENST00000397511 C9orf163Q8N9P6 203 aa3.17□□□□□ -1.9
SSR1-202ENST00000397511 LINC00313P59037 77 aa3.16□□□□□ -1.9
SSR1-202ENST00000397511 LINC01554Q52M75 96 aa3.16□□□□□ -1.9
SSR1-202ENST00000397511 PLA2G2DQ9UNK4 145 aa3.16□□□□□ -1.9
SSR1-202ENST00000397511 IGLV7-46A0A075B6I9 117 aa3.15□□□□□ -1.9
SSR1-202ENST00000397511 SPAG11AQ6PDA7 123 aa3.15□□□□□ -1.9
SSR1-202ENST00000397511 REG3GQ6UW15 175 aa3.15□□□□□ -1.91
SSR1-202ENST00000397511 KMT2AQ03164 3969 aa3.15□□□□□ -1.91
SSR1-202ENST00000397511 KRTAP4-16G5E9R7 235 aaPredicted RBP3.15□□□□□ -1.91
SSR1-202ENST00000397511 SPINK7P58062 85 aa3.15□□□□□ -1.91
SSR1-202ENST00000397511 PLAC8Q9NZF1 115 aa3.15□□□□□ -1.91
SSR1-202ENST00000397511 KRTAP29-1A8MX34 341 aaPredicted RBP3.14□□□□□ -1.91
SSR1-202ENST00000397511 RPL37AP61513 92 aaKnown RBP3.14□□□□□ -1.91
SSR1-202ENST00000397511 KRTAP11-1Q8IUC1 163 aa3.14□□□□□ -1.91
SSR1-202ENST00000397511 PRAC1Q96KF2 57 aa3.14□□□□□ -1.91
SSR1-202ENST00000397511 LINC00476Q8WZB0 136 aa3.14□□□□□ -1.91
SSR1-202ENST00000397511 A0A087WSZ3 146 aa3.14□□□□□ -1.91
SSR1-202ENST00000397511 TLX1NBP0CAT3 122 aa3.13□□□□□ -1.91
SSR1-202ENST00000397511 CNBPP62633 177 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms