RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 ETDBQ3ZM63 59 aa12.75□□□□□ -0.37
CPNE1-204ENST00000397443 NDUFV3P56181 108 aaKnown RBP12.72□□□□□ -0.37
CPNE1-204ENST00000397443 H3BQ85 93 aa12.72□□□□□ -0.37
CPNE1-204ENST00000397443 SPINK6Q6UWN8 80 aa12.71□□□□□ -0.37
CPNE1-204ENST00000397443 SMIM29Q86T20 159 aa12.7□□□□□ -0.38
CPNE1-204ENST00000397443 PPDPFLQ8WWR9 84 aa12.7□□□□□ -0.38
CPNE1-204ENST00000397443 SPRR1BP22528 89 aa12.68□□□□□ -0.38
CPNE1-204ENST00000397443 Q8N1X5 172 aa12.68□□□□□ -0.38
CPNE1-204ENST00000397443 TEN1Q86WV5 123 aa12.68□□□□□ -0.38
CPNE1-204ENST00000397443 LINC01600Q96MT4 127 aa12.68□□□□□ -0.38
CPNE1-204ENST00000397443 BIRC6Q9NR09 4857 aa12.68□□□□□ -0.38
CPNE1-204ENST00000397443 IGLV9-49A0A0B4J1Y8 123 aa12.67□□□□□ -0.38
CPNE1-204ENST00000397443 LINC00483Q53H64 154 aa12.67□□□□□ -0.38
CPNE1-204ENST00000397443 F8WEM9 126 aa12.66□□□□□ -0.38
CPNE1-204ENST00000397443 C14orf132Q9NPU4 83 aa12.64□□□□□ -0.39
CPNE1-204ENST00000397443 KRTAP1-4P0C5Y4 121 aa12.62□□□□□ -0.39
CPNE1-204ENST00000397443 RBM3P98179 157 aaKnown RBP12.62□□□□□ -0.39
CPNE1-204ENST00000397443 C9orf153Q5TBE3 101 aa12.62□□□□□ -0.39
CPNE1-204ENST00000397443 JMJD7-PLA2G4BH0Y9G9 81 aa12.62□□□□□ -0.39
CPNE1-204ENST00000397443 A0A0G2JQZ4 141 aa12.6□□□□□ -0.39
CPNE1-204ENST00000397443 A0A087X002 238 aa12.6□□□□□ -0.39
CPNE1-204ENST00000397443 OBSCN-AS1Q96MR7 158 aa12.59□□□□□ -0.39
CPNE1-204ENST00000397443 MOBPQ13875 183 aa12.58□□□□□ -0.39
CPNE1-204ENST00000397443 DSCR8Q96T75 97 aa12.58□□□□□ -0.4
CPNE1-204ENST00000397443 FLG2Q5D862 2391 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-204ENST00000397443 CRYGAP11844 174 aa12.54□□□□□ -0.4
CPNE1-204ENST00000397443 VPS25Q9BRG1 176 aa12.54□□□□□ -0.4
CPNE1-204ENST00000397443 PKHD1L1Q86WI1 4243 aa12.53□□□□□ -0.4
CPNE1-204ENST00000397443 KRTAP13-2Q52LG2 175 aa12.53□□□□□ -0.4
CPNE1-204ENST00000397443 KRTAP4-5Q9BYR2 181 aa12.53□□□□□ -0.4
CPNE1-204ENST00000397443 FAM229BQ4G0N7 80 aa12.52□□□□□ -0.4
CPNE1-204ENST00000397443 TRBV7-4A0A0J9YYF1 115 aa12.52□□□□□ -0.41
CPNE1-204ENST00000397443 IGFL1Q6UW32 110 aa12.52□□□□□ -0.41
CPNE1-204ENST00000397443 PRR26Q8N8Z3 221 aa12.52□□□□□ -0.41
CPNE1-204ENST00000397443 IGLV8-61A0A075B6I0 122 aa12.5□□□□□ -0.41
CPNE1-204ENST00000397443 Q8NBF4 154 aa12.5□□□□□ -0.41
CPNE1-204ENST00000397443 Q6ZQT0 140 aa12.49□□□□□ -0.41
CPNE1-204ENST00000397443 LOC110117498A0A087WWA1 95 aa12.48□□□□□ -0.41
CPNE1-204ENST00000397443 CCKP06307 115 aa12.48□□□□□ -0.41
CPNE1-204ENST00000397443 Q6JHZ5 121 aa12.47□□□□□ -0.41
CPNE1-204ENST00000397443 HRCT1Q6UXD1 115 aa12.47□□□□□ -0.41
CPNE1-204ENST00000397443 LRP1Q07954 4544 aaKnown RBP12.46□□□□□ -0.42
CPNE1-204ENST00000397443 TYMSOSQ8TAI1 123 aa12.45□□□□□ -0.42
CPNE1-204ENST00000397443 HERC2O95714 4834 aa12.44□□□□□ -0.42
CPNE1-204ENST00000397443 A0A1W2PNM2 257 aa12.43□□□□□ -0.42
CPNE1-204ENST00000397443 PDE6GP18545 87 aa12.43□□□□□ -0.42
CPNE1-204ENST00000397443 MYCBP2O75592 4640 aa12.41□□□□□ -0.42
CPNE1-204ENST00000397443 SSBP3-AS1Q7Z2R9 100 aa12.41□□□□□ -0.42
CPNE1-204ENST00000397443 J3QR89 54 aa12.37□□□□□ -0.43
CPNE1-204ENST00000397443 ABCA13Q86UQ4 5058 aa12.34□□□□□ -0.43
CPNE1-204ENST00000397443 FAT3Q8TDW7 4589 aa12.34□□□□□ -0.43
CPNE1-204ENST00000397443 K7ERU9 68 aa12.34□□□□□ -0.43
CPNE1-204ENST00000397443 A0A087WSZ3 146 aa12.33□□□□□ -0.44
CPNE1-204ENST00000397443 C4orf48Q5BLP8 95 aa12.3□□□□□ -0.44
CPNE1-204ENST00000397443 LINC00304Q8N9R0 145 aa12.3□□□□□ -0.44
CPNE1-204ENST00000397443 LINC00846Q9NV44 126 aa12.3□□□□□ -0.44
CPNE1-204ENST00000397443 TRBV7-7A0A0K0K1E9 115 aa12.29□□□□□ -0.44
CPNE1-204ENST00000397443 Q6Q795 121 aa12.29□□□□□ -0.44
CPNE1-204ENST00000397443 C21orf62-AS1Q17RA5 79 aa12.27□□□□□ -0.45
CPNE1-204ENST00000397443 TNXBP22105 4242 aa12.26□□□□□ -0.45
CPNE1-204ENST00000397443 FAM240AA0A1B0GVK7 77 aa12.26□□□□□ -0.45
CPNE1-204ENST00000397443 KRTAP10-8P60410 259 aa12.25□□□□□ -0.45
CPNE1-204ENST00000397443 ACYP1P07311 99 aa12.25□□□□□ -0.45
CPNE1-204ENST00000397443 CD164Q04900 197 aa12.24□□□□□ -0.45
CPNE1-204ENST00000397443 DMBT1Q9UGM3 2413 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-204ENST00000397443 A0A1B0GW54 56 aa12.2□□□□□ -0.46
CPNE1-204ENST00000397443 MT1HL1P0DM35 61 aa12.2□□□□□ -0.46
CPNE1-204ENST00000397443 NREPQ16612 68 aa12.2□□□□□ -0.46
CPNE1-204ENST00000397443 UBL5Q9BZL1 73 aa12.2□□□□□ -0.46
CPNE1-204ENST00000397443 SPINK1P00995 79 aa12.19□□□□□ -0.46
CPNE1-204ENST00000397443 OXTP01178 125 aa12.19□□□□□ -0.46
CPNE1-204ENST00000397443 Q6ZVQ6 151 aa12.19□□□□□ -0.46
CPNE1-204ENST00000397443 DEFB116Q30KQ4 102 aa12.17□□□□□ -0.46
CPNE1-204ENST00000397443 SPAG11AQ6PDA7 123 aa12.17□□□□□ -0.46
CPNE1-204ENST00000397443 CDIP1Q9H305 208 aa12.16□□□□□ -0.46
CPNE1-204ENST00000397443 SS18L2Q9UHA2 77 aa12.16□□□□□ -0.46
CPNE1-204ENST00000397443 LIMD2Q9BT23 127 aa12.13□□□□□ -0.47
CPNE1-204ENST00000397443 KRTAP29-1A8MX34 341 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-204ENST00000397443 J3QL48 77 aa12.07□□□□□ -0.48
CPNE1-204ENST00000397443 Q96NJ1 140 aa12.07□□□□□ -0.48
CPNE1-204ENST00000397443 LINC00472Q9H8W2 130 aa12.07□□□□□ -0.48
CPNE1-204ENST00000397443 IGKV3D-7A0A0C4DH55 119 aa12.07□□□□□ -0.48
CPNE1-204ENST00000397443 Q5XG85 94 aa12.07□□□□□ -0.48
CPNE1-204ENST00000397443 RPS29P62273 56 aaKnown RBP12.06□□□□□ -0.48
CPNE1-204ENST00000397443 BPY2O14599 106 aa12.05□□□□□ -0.48
CPNE1-204ENST00000397443 RETNLBQ9BQ08 111 aa12.05□□□□□ -0.48
CPNE1-204ENST00000397443 LINC00643Q86TS7 51 aa12.05□□□□□ -0.48
CPNE1-204ENST00000397443 C1orf195Q5TG92 126 aa12.04□□□□□ -0.48
CPNE1-204ENST00000397443 IGKV4-1P06312 121 aa12.03□□□□□ -0.48
CPNE1-204ENST00000397443 SIGMAR1Q99720 223 aa12.03□□□□□ -0.48
CPNE1-204ENST00000397443 PCLOQ9Y6V0 5065 aa12.03□□□□□ -0.48
CPNE1-204ENST00000397443 ASB16-AS1Q495Z4 193 aa12.02□□□□□ -0.49
CPNE1-204ENST00000397443 Q8N9L7 120 aa12□□□□□ -0.49
CPNE1-204ENST00000397443 MT-ATP8P03928 68 aa11.99□□□□□ -0.49
CPNE1-204ENST00000397443 DSCR10P59022 87 aa11.97□□□□□ -0.49
CPNE1-204ENST00000397443 CXCL6P80162 114 aa11.95□□□□□ -0.5
CPNE1-204ENST00000397443 J3KT08 172 aa11.94□□□□□ -0.5
CPNE1-204ENST00000397443 K7EQZ3 153 aa11.94□□□□□ -0.5
CPNE1-204ENST00000397443 ATP5EP2Q5VTU8 51 aa11.94□□□□□ -0.5
CPNE1-204ENST00000397443 HIST1H4AP62805 103 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms