RNA–Protein interactions for RNA: ENST00000397358.7

HMBOX1-203, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-203ENST00000397358 HCG22E2RYF7 251 aa8.3□□□□□ -1.08
HMBOX1-203ENST00000397358 FP248Q71RG6 208 aaPredicted RBP8.3□□□□□ -1.08
HMBOX1-203ENST00000397358 BRK1Q8WUW1 75 aa8.29□□□□□ -1.08
HMBOX1-203ENST00000397358 ANK2Q01484 3957 aa8.29□□□□□ -1.08
HMBOX1-203ENST00000397358 C16orf90A8MZG2 172 aa8.29□□□□□ -1.08
HMBOX1-203ENST00000397358 TENM2Q9NT68 2774 aa8.29□□□□□ -1.08
HMBOX1-203ENST00000397358 FAM229BQ4G0N7 80 aa8.29□□□□□ -1.08
HMBOX1-203ENST00000397358 LINC00336Q6ZUF6 198 aa8.29□□□□□ -1.08
HMBOX1-203ENST00000397358 SPRR4Q96PI1 79 aa8.28□□□□□ -1.08
HMBOX1-203ENST00000397358 SRRM2Q9UQ35 2752 aaKnown RBP8.27□□□□□ -1.09
HMBOX1-203ENST00000397358 H0Y9J4 135 aa8.27□□□□□ -1.09
HMBOX1-203ENST00000397358 A0A1B0GW54 56 aa8.26□□□□□ -1.09
HMBOX1-203ENST00000397358 CSMD3Q7Z407 3707 aa8.25□□□□□ -1.09
HMBOX1-203ENST00000397358 MP68P56378 58 aa8.25□□□□□ -1.09
HMBOX1-203ENST00000397358 LINC00208Q96KT6 92 aa8.25□□□□□ -1.09
HMBOX1-203ENST00000397358 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
HMBOX1-203ENST00000397358 IGLV9-49A0A0B4J1Y8 123 aa8.23□□□□□ -1.09
HMBOX1-203ENST00000397358 B9D2Q9BPU9 175 aa8.23□□□□□ -1.09
HMBOX1-203ENST00000397358 KRTAP11-1Q8IUC1 163 aa8.22□□□□□ -1.09
HMBOX1-203ENST00000397358 C14orf177Q52M58 125 aa8.22□□□□□ -1.09
HMBOX1-203ENST00000397358 CASC2Q6XLA1 102 aa8.2□□□□□ -1.1
HMBOX1-203ENST00000397358 C1orf64Q8NEQ6 169 aa8.19□□□□□ -1.1
HMBOX1-203ENST00000397358 CNBPP62633 177 aaKnown RBP8.18□□□□□ -1.1
HMBOX1-203ENST00000397358 PSPHP1O15172 72 aa8.17□□□□□ -1.1
HMBOX1-203ENST00000397358 H0Y9P7 68 aa8.16□□□□□ -1.1
HMBOX1-203ENST00000397358 PRO0628Q9UI54 55 aa8.16□□□□□ -1.1
HMBOX1-203ENST00000397358 APLNQ9ULZ1 77 aa8.16□□□□□ -1.1
HMBOX1-203ENST00000397358 NDUFS5O43920 106 aa8.15□□□□□ -1.1
HMBOX1-203ENST00000397358 NDUFB1O75438 58 aa8.14□□□□□ -1.11
HMBOX1-203ENST00000397358 MDFIQ99750 246 aa8.14□□□□□ -1.11
HMBOX1-203ENST00000397358 PANO1I0J062 215 aa8.14□□□□□ -1.11
HMBOX1-203ENST00000397358 C1orf195Q5TG92 126 aa8.14□□□□□ -1.11
HMBOX1-203ENST00000397358 C9orf163Q8N9P6 203 aa8.13□□□□□ -1.11
HMBOX1-203ENST00000397358 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
HMBOX1-203ENST00000397358 hDV103S1A0JD37 113 aa8.12□□□□□ -1.11
HMBOX1-203ENST00000397358 PRR15Q8IV56 129 aa8.12□□□□□ -1.11
HMBOX1-203ENST00000397358 ANAPC11Q9NYG5 84 aa8.11□□□□□ -1.11
HMBOX1-203ENST00000397358 DNAH10Q8IVF4 4471 aa8.1□□□□□ -1.11
HMBOX1-203ENST00000397358 CDK2AP2O75956 126 aa8.1□□□□□ -1.11
HMBOX1-203ENST00000397358 A8MWP4 228 aa8.09□□□□□ -1.11
HMBOX1-203ENST00000397358 PCOTHQ58A44 107 aa8.09□□□□□ -1.11
HMBOX1-203ENST00000397358 COL7A1Q02388 2944 aa8.09□□□□□ -1.11
HMBOX1-203ENST00000397358 HUWE1Q7Z6Z7 4374 aaKnown RBP8.09□□□□□ -1.11
HMBOX1-203ENST00000397358 IGLV8-61A0A075B6I0 122 aa8.08□□□□□ -1.12
HMBOX1-203ENST00000397358 ZCCHC13Q8WW36 166 aaKnown RBP8.08□□□□□ -1.12
HMBOX1-203ENST00000397358 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.08□□□□□ -1.12
HMBOX1-203ENST00000397358 IGHV6-1A0A0B4J1U7 121 aa8.07□□□□□ -1.12
HMBOX1-203ENST00000397358 TRAV22A0A0B4J277 110 aa8.07□□□□□ -1.12
HMBOX1-203ENST00000397358 SPINK6Q6UWN8 80 aa8.06□□□□□ -1.12
HMBOX1-203ENST00000397358 LCE6AA0A183 80 aa8.06□□□□□ -1.12
HMBOX1-203ENST00000397358 CMYA5Q8N3K9 4069 aa8.05□□□□□ -1.12
HMBOX1-203ENST00000397358 MOBPQ13875 183 aa8.05□□□□□ -1.12
HMBOX1-203ENST00000397358 LINC00472Q9H8W2 130 aa8.05□□□□□ -1.12
HMBOX1-203ENST00000397358 LYSTQ99698 3801 aa8.03□□□□□ -1.12
HMBOX1-203ENST00000397358 NUPR2A6NF83 97 aa8.03□□□□□ -1.12
HMBOX1-203ENST00000397358 KRTAP29-1A8MX34 341 aaPredicted RBP8.02□□□□□ -1.13
HMBOX1-203ENST00000397358 A8MUN3 132 aa8.01□□□□□ -1.13
HMBOX1-203ENST00000397358 SPRR1BP22528 89 aa8.01□□□□□ -1.13
HMBOX1-203ENST00000397358 H3BS24 57 aa7.98□□□□□ -1.13
HMBOX1-203ENST00000397358 RTL8CO15255 209 aa7.98□□□□□ -1.13
HMBOX1-203ENST00000397358 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
HMBOX1-203ENST00000397358 MMP24-AS1A0A0U1RRL7 71 aa7.98□□□□□ -1.13
HMBOX1-203ENST00000397358 CYP4F30PQ9H0H9 118 aa7.98□□□□□ -1.13
HMBOX1-203ENST00000397358 A0A087WTM6 91 aa7.97□□□□□ -1.13
HMBOX1-203ENST00000397358 CIRBP-AS1Q8TBR5 109 aa7.97□□□□□ -1.13
HMBOX1-203ENST00000397358 CHKB-CPT1BH3BT56 60 aa7.96□□□□□ -1.14
HMBOX1-203ENST00000397358 SPACA4Q8TDM5 124 aa7.96□□□□□ -1.14
HMBOX1-203ENST00000397358 PRR15LQ9BU68 103 aa7.96□□□□□ -1.14
HMBOX1-203ENST00000397358 ZNF706Q9Y5V0 76 aaPredicted RBP7.95□□□□□ -1.14
HMBOX1-203ENST00000397358 Q1T7F1 81 aa7.94□□□□□ -1.14
HMBOX1-203ENST00000397358 C8orf17Q9NRJ1 99 aa7.94□□□□□ -1.14
HMBOX1-203ENST00000397358 IGLV5-52A0A0A0MRZ9 124 aa7.94□□□□□ -1.14
HMBOX1-203ENST00000397358 Q6ZRN7 208 aaPredicted RBP7.94□□□□□ -1.14
HMBOX1-203ENST00000397358 H3BPC8 53 aa7.93□□□□□ -1.14
HMBOX1-203ENST00000397358 DNAH9Q9NYC9 4486 aa7.93□□□□□ -1.14
HMBOX1-203ENST00000397358 TGP01266 2768 aa7.93□□□□□ -1.14
HMBOX1-203ENST00000397358 DNAH3Q8TD57 4116 aa7.92□□□□□ -1.14
HMBOX1-203ENST00000397358 LY6G6CO95867 125 aa7.92□□□□□ -1.14
HMBOX1-203ENST00000397358 DNAH1Q9P2D7 4330 aa7.91□□□□□ -1.14
HMBOX1-203ENST00000397358 KRTAP13-1Q8IUC0 172 aa7.91□□□□□ -1.14
HMBOX1-203ENST00000397358 COA5Q86WW8 74 aa7.91□□□□□ -1.14
HMBOX1-203ENST00000397358 SPTSSBQ8NFR3 76 aa7.9□□□□□ -1.15
HMBOX1-203ENST00000397358 RETNLBQ9BQ08 111 aa7.9□□□□□ -1.15
HMBOX1-203ENST00000397358 A0A1B0GVX0 72 aa7.89□□□□□ -1.15
HMBOX1-203ENST00000397358 ZNF861PO60384 105 aa7.89□□□□□ -1.15
HMBOX1-203ENST00000397358 SPANXA2-OT1Q8N9U9 137 aa7.88□□□□□ -1.15
HMBOX1-203ENST00000397358 A0A087X002 238 aa7.88□□□□□ -1.15
HMBOX1-203ENST00000397358 NOTCH2NLQ7Z3S9 236 aa7.88□□□□□ -1.15
HMBOX1-203ENST00000397358 SPAG11AQ6PDA7 123 aa7.88□□□□□ -1.15
HMBOX1-203ENST00000397358 TP53AIP1Q9HCN2 124 aa7.88□□□□□ -1.15
HMBOX1-203ENST00000397358 WWC2-AS2Q96NR7 200 aa7.88□□□□□ -1.15
HMBOX1-203ENST00000397358 Q96NJ1 140 aa7.87□□□□□ -1.15
HMBOX1-203ENST00000397358 MRPL34Q9BQ48 92 aaKnown RBP7.87□□□□□ -1.15
HMBOX1-203ENST00000397358 A6NED7 52 aa7.86□□□□□ -1.15
HMBOX1-203ENST00000397358 C1orf134Q5TEV5 83 aa7.86□□□□□ -1.15
HMBOX1-203ENST00000397358 CD164Q04900 197 aa7.86□□□□□ -1.15
HMBOX1-203ENST00000397358 A8MU10 97 aa7.85□□□□□ -1.15
HMBOX1-203ENST00000397358 Q8N9P0 234 aaPredicted RBP7.85□□□□□ -1.15
HMBOX1-203ENST00000397358 PLECQ15149 4684 aaKnown RBP7.84□□□□□ -1.15
HMBOX1-203ENST00000397358 LIMD2Q9BT23 127 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms