RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NDUFV3P56181 108 aaKnown RBP7.73□□□□□ -1.17
TRIM39-204ENST00000396548 JMJD7-PLA2G4BH0Y9G9 81 aa7.73□□□□□ -1.17
TRIM39-204ENST00000396548 ZNF861PO60384 105 aa7.73□□□□□ -1.17
TRIM39-204ENST00000396548 IGLV7-43P04211 117 aa7.73□□□□□ -1.17
TRIM39-204ENST00000396548 DEFB105AQ8NG35 78 aa7.72□□□□□ -1.17
TRIM39-204ENST00000396548 EPPK1P58107 5090 aaKnown RBP7.71□□□□□ -1.17
TRIM39-204ENST00000396548 C14orf132Q9NPU4 83 aa7.71□□□□□ -1.18
TRIM39-204ENST00000396548 HSPG2P98160 4391 aa7.7□□□□□ -1.18
TRIM39-204ENST00000396548 LOC110117498A0A087WWA1 95 aa7.7□□□□□ -1.18
TRIM39-204ENST00000396548 C3orf22Q8N5N4 141 aa7.7□□□□□ -1.18
TRIM39-204ENST00000396548 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
TRIM39-204ENST00000396548 LAMTOR3Q9UHA4 124 aa7.69□□□□□ -1.18
TRIM39-204ENST00000396548 LINC00483Q53H64 154 aa7.69□□□□□ -1.18
TRIM39-204ENST00000396548 RYR1P21817 5038 aa7.69□□□□□ -1.18
TRIM39-204ENST00000396548 RBM3P98179 157 aaKnown RBP7.68□□□□□ -1.18
TRIM39-204ENST00000396548 SPRR4Q96PI1 79 aa7.68□□□□□ -1.18
TRIM39-204ENST00000396548 Q6ZQT0 140 aa7.68□□□□□ -1.18
TRIM39-204ENST00000396548 FAT1Q14517 4588 aa7.68□□□□□ -1.18
TRIM39-204ENST00000396548 IGLV8-61A0A075B6I0 122 aa7.66□□□□□ -1.18
TRIM39-204ENST00000396548 KRTAP10-4P60372 401 aaPredicted RBP7.66□□□□□ -1.18
TRIM39-204ENST00000396548 FAM240AA0A1B0GVK7 77 aa7.66□□□□□ -1.18
TRIM39-204ENST00000396548 CCKP06307 115 aa7.66□□□□□ -1.18
TRIM39-204ENST00000396548 GAGE2AQ6NT46 116 aa7.64□□□□□ -1.19
TRIM39-204ENST00000396548 DSCR8Q96T75 97 aa7.63□□□□□ -1.19
TRIM39-204ENST00000396548 ZNF706Q9Y5V0 76 aaPredicted RBP7.62□□□□□ -1.19
TRIM39-204ENST00000396548 PDE6GP18545 87 aa7.62□□□□□ -1.19
TRIM39-204ENST00000396548 ACYP1P07311 99 aa7.61□□□□□ -1.19
TRIM39-204ENST00000396548 RPL37AP61513 92 aaKnown RBP7.6□□□□□ -1.19
TRIM39-204ENST00000396548 SMR3BP02814 79 aaPredicted RBP7.59□□□□□ -1.19
TRIM39-204ENST00000396548 CDK2AP2O75956 126 aa7.59□□□□□ -1.19
TRIM39-204ENST00000396548 A0A1W2PNM2 257 aa7.58□□□□□ -1.2
TRIM39-204ENST00000396548 IGFL1Q6UW32 110 aa7.58□□□□□ -1.2
TRIM39-204ENST00000396548 ANAPC11Q9NYG5 84 aa7.58□□□□□ -1.2
TRIM39-204ENST00000396548 KRTAP1-4P0C5Y4 121 aa7.57□□□□□ -1.2
TRIM39-204ENST00000396548 LINC00846Q9NV44 126 aa7.57□□□□□ -1.2
TRIM39-204ENST00000396548 A0A0G2JQZ4 141 aa7.56□□□□□ -1.2
TRIM39-204ENST00000396548 F8WEM9 126 aa7.56□□□□□ -1.2
TRIM39-204ENST00000396548 KIAA1109Q2LD37 5005 aa7.56□□□□□ -1.2
TRIM39-204ENST00000396548 KRTAP17-1Q9BYP8 105 aa7.55□□□□□ -1.2
TRIM39-204ENST00000396548 Q6Q795 121 aa7.55□□□□□ -1.2
TRIM39-204ENST00000396548 SPINK6Q6UWN8 80 aa7.55□□□□□ -1.2
TRIM39-204ENST00000396548 Q8NBF4 154 aa7.55□□□□□ -1.2
TRIM39-204ENST00000396548 Q6JHZ5 121 aa7.54□□□□□ -1.2
TRIM39-204ENST00000396548 FAM236AA0A1B0GUQ0 79 aa7.53□□□□□ -1.2
TRIM39-204ENST00000396548 FAM236BA0A1B0GV22 79 aa7.53□□□□□ -1.2
TRIM39-204ENST00000396548 A0A1B0GW54 56 aa7.53□□□□□ -1.2
TRIM39-204ENST00000396548 CRYGAP11844 174 aa7.52□□□□□ -1.21
TRIM39-204ENST00000396548 FAM229BQ4G0N7 80 aa7.52□□□□□ -1.21
TRIM39-204ENST00000396548 C9orf153Q5TBE3 101 aa7.52□□□□□ -1.21
TRIM39-204ENST00000396548 A0A087X002 238 aa7.51□□□□□ -1.21
TRIM39-204ENST00000396548 IGLV9-49A0A0B4J1Y8 123 aa7.51□□□□□ -1.21
TRIM39-204ENST00000396548 KRTAP13-2Q52LG2 175 aa7.51□□□□□ -1.21
TRIM39-204ENST00000396548 MOBPQ13875 183 aa7.49□□□□□ -1.21
TRIM39-204ENST00000396548 TRBV7-7A0A0K0K1E9 115 aa7.48□□□□□ -1.21
TRIM39-204ENST00000396548 C5orf47Q569G3 176 aa7.48□□□□□ -1.21
TRIM39-204ENST00000396548 LINC00643Q86TS7 51 aa7.47□□□□□ -1.21
TRIM39-204ENST00000396548 Q6ZVQ6 151 aa7.47□□□□□ -1.21
TRIM39-204ENST00000396548 TNXBP22105 4242 aa7.45□□□□□ -1.22
TRIM39-204ENST00000396548 SSBP3-AS1Q7Z2R9 100 aa7.45□□□□□ -1.22
TRIM39-204ENST00000396548 PLA2G1BP04054 148 aaKnown RBP7.45□□□□□ -1.22
TRIM39-204ENST00000396548 FAT3Q8TDW7 4589 aa7.44□□□□□ -1.22
TRIM39-204ENST00000396548 FAM229AH3BQW9 127 aa7.44□□□□□ -1.22
TRIM39-204ENST00000396548 Q5VSD8 79 aa7.44□□□□□ -1.22
TRIM39-204ENST00000396548 UBL5Q9BZL1 73 aa7.44□□□□□ -1.22
TRIM39-204ENST00000396548 BIRC6Q9NR09 4857 aa7.43□□□□□ -1.22
TRIM39-204ENST00000396548 J3KT08 172 aa7.42□□□□□ -1.22
TRIM39-204ENST00000396548 A0A087WSZ3 146 aa7.41□□□□□ -1.22
TRIM39-204ENST00000396548 CD164Q04900 197 aa7.41□□□□□ -1.22
TRIM39-204ENST00000396548 UQCRQO14949 82 aa7.41□□□□□ -1.22
TRIM39-204ENST00000396548 Q8N1X5 172 aa7.4□□□□□ -1.22
TRIM39-204ENST00000396548 NREPQ16612 68 aa7.4□□□□□ -1.23
TRIM39-204ENST00000396548 LRP1Q07954 4544 aaKnown RBP7.39□□□□□ -1.23
TRIM39-204ENST00000396548 ATP5EP2Q5VTU8 51 aa7.39□□□□□ -1.23
TRIM39-204ENST00000396548 CXCL6P80162 114 aa7.38□□□□□ -1.23
TRIM39-204ENST00000396548 Q96NJ1 140 aa7.38□□□□□ -1.23
TRIM39-204ENST00000396548 HRCT1Q6UXD1 115 aa7.38□□□□□ -1.23
TRIM39-204ENST00000396548 PRR26Q8N8Z3 221 aa7.38□□□□□ -1.23
TRIM39-204ENST00000396548 LINC00472Q9H8W2 130 aa7.38□□□□□ -1.23
TRIM39-204ENST00000396548 IGKV3D-7A0A0C4DH55 119 aa7.37□□□□□ -1.23
TRIM39-204ENST00000396548 CYSTM1Q9H1C7 97 aa7.37□□□□□ -1.23
TRIM39-204ENST00000396548 IMUPQ9GZP8 106 aa7.36□□□□□ -1.23
TRIM39-204ENST00000396548 COX7CP15954 63 aa7.36□□□□□ -1.23
TRIM39-204ENST00000396548 HERC2O95714 4834 aa7.36□□□□□ -1.23
TRIM39-204ENST00000396548 TYMSOSQ8TAI1 123 aa7.35□□□□□ -1.23
TRIM39-204ENST00000396548 C4orf26Q17RF5 130 aa7.35□□□□□ -1.23
TRIM39-204ENST00000396548 Q5XG85 94 aa7.34□□□□□ -1.23
TRIM39-204ENST00000396548 DSCR10P59022 87 aa7.34□□□□□ -1.23
TRIM39-204ENST00000396548 ASB16-AS1Q495Z4 193 aa7.34□□□□□ -1.23
TRIM39-204ENST00000396548 BPY2O14599 106 aa7.32□□□□□ -1.24
TRIM39-204ENST00000396548 MYCBP2O75592 4640 aa7.31□□□□□ -1.24
TRIM39-204ENST00000396548 IGKV4-1P06312 121 aa7.3□□□□□ -1.24
TRIM39-204ENST00000396548 A0A087WVE0 104 aa7.3□□□□□ -1.24
TRIM39-204ENST00000396548 OXTP01178 125 aa7.3□□□□□ -1.24
TRIM39-204ENST00000396548 KRTAP10-8P60410 259 aa7.3□□□□□ -1.24
TRIM39-204ENST00000396548 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
TRIM39-204ENST00000396548 ABCA13Q86UQ4 5058 aa7.3□□□□□ -1.24
TRIM39-204ENST00000396548 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
TRIM39-204ENST00000396548 ATOX1O00244 68 aa7.28□□□□□ -1.24
TRIM39-204ENST00000396548 HIST1H4AP62805 103 aaKnown RBP7.28□□□□□ -1.24
TRIM39-204ENST00000396548 KRTAP4-5Q9BYR2 181 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms