RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 C1orf195Q5TG92 126 aa8.84□□□□□ -0.99
SNCA-204ENST00000394989 DNAH2Q9P225 4427 aa8.84□□□□□ -0.99
SNCA-204ENST00000394989 NUPR2A6NF83 97 aa8.83□□□□□ -1
SNCA-204ENST00000394989 CXCL6P80162 114 aa8.83□□□□□ -1
SNCA-204ENST00000394989 NBDYA0A0U1RRE5 68 aa8.83□□□□□ -1
SNCA-204ENST00000394989 REG3GQ6UW15 175 aa8.82□□□□□ -1
SNCA-204ENST00000394989 FUSP35637 526 aaKnown RBP eCLIP8.82□□□□□ -1
SNCA-204ENST00000394989 Q6ZRN7 208 aaPredicted RBP8.82□□□□□ -1
SNCA-204ENST00000394989 IGLV5-48A0A075B6I7 105 aa8.81□□□□□ -1
SNCA-204ENST00000394989 CHTF8P0CG12 524 aa8.81□□□□□ -1
SNCA-204ENST00000394989 HECTD4Q9Y4D8 3996 aa8.8□□□□□ -1
SNCA-204ENST00000394989 SRRM2Q9UQ35 2752 aaKnown RBP8.8□□□□□ -1
SNCA-204ENST00000394989 TNP2Q05952 138 aa8.79□□□□□ -1
SNCA-204ENST00000394989 C14orf177Q52M58 125 aa8.79□□□□□ -1
SNCA-204ENST00000394989 UBE2BP63146 152 aa8.79□□□□□ -1
SNCA-204ENST00000394989 PSPHP1O15172 72 aa8.78□□□□□ -1
SNCA-204ENST00000394989 KRTAP11-1Q8IUC1 163 aa8.78□□□□□ -1
SNCA-204ENST00000394989 NDUFC1O43677 76 aa8.77□□□□□ -1
SNCA-204ENST00000394989 V9GYY9 64 aa8.77□□□□□ -1
SNCA-204ENST00000394989 C9orf163Q8N9P6 203 aa8.77□□□□□ -1.01
SNCA-204ENST00000394989 IGKV4-1P06312 121 aa8.76□□□□□ -1.01
SNCA-204ENST00000394989 SMIM29Q86T20 159 aa8.76□□□□□ -1.01
SNCA-204ENST00000394989 PRLHP81277 87 aa8.76□□□□□ -1.01
SNCA-204ENST00000394989 BCE1O60756 84 aa8.75□□□□□ -1.01
SNCA-204ENST00000394989 PHF5AQ7RTV0 110 aaKnown RBP8.75□□□□□ -1.01
SNCA-204ENST00000394989 PANO1I0J062 215 aa8.74□□□□□ -1.01
SNCA-204ENST00000394989 A0A1W2PNM2 257 aa8.73□□□□□ -1.01
SNCA-204ENST00000394989 FBN3Q75N90 2809 aa8.73□□□□□ -1.01
SNCA-204ENST00000394989 SEC61GP60059 68 aa8.73□□□□□ -1.01
SNCA-204ENST00000394989 DEFB116Q30KQ4 102 aa8.73□□□□□ -1.01
SNCA-204ENST00000394989 C1orf137Q5JT78 98 aa8.72□□□□□ -1.01
SNCA-204ENST00000394989 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
SNCA-204ENST00000394989 DNAH17Q9UFH2 4485 aa8.7□□□□□ -1.02
SNCA-204ENST00000394989 A0A0G2JQZ4 141 aa8.7□□□□□ -1.02
SNCA-204ENST00000394989 TGP01266 2768 aa8.69□□□□□ -1.02
SNCA-204ENST00000394989 ATP5EP56381 51 aaPredicted RBP8.68□□□□□ -1.02
SNCA-204ENST00000394989 Q8NBF4 154 aa8.68□□□□□ -1.02
SNCA-204ENST00000394989 C1orf64Q8NEQ6 169 aa8.67□□□□□ -1.02
SNCA-204ENST00000394989 SPRR4Q96PI1 79 aa8.67□□□□□ -1.02
SNCA-204ENST00000394989 DNAH8Q96JB1 4490 aa8.67□□□□□ -1.02
SNCA-204ENST00000394989 LINC00476Q8WZB0 136 aa8.67□□□□□ -1.02
SNCA-204ENST00000394989 A8MU10 97 aa8.66□□□□□ -1.02
SNCA-204ENST00000394989 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.66□□□□□ -1.02
SNCA-204ENST00000394989 FRAS1Q86XX4 4008 aa8.66□□□□□ -1.02
SNCA-204ENST00000394989 A0A087WTM6 91 aa8.66□□□□□ -1.02
SNCA-204ENST00000394989 A0A1B0GW54 56 aa8.65□□□□□ -1.02
SNCA-204ENST00000394989 Q6ZR54 194 aa8.65□□□□□ -1.03
SNCA-204ENST00000394989 H0Y9J4 135 aa8.64□□□□□ -1.03
SNCA-204ENST00000394989 SPACA4Q8TDM5 124 aa8.64□□□□□ -1.03
SNCA-204ENST00000394989 IGFL1Q6UW32 110 aa8.63□□□□□ -1.03
SNCA-204ENST00000394989 IGLV8-61A0A075B6I0 122 aa8.61□□□□□ -1.03
SNCA-204ENST00000394989 WFDC13Q8IUB5 93 aa8.61□□□□□ -1.03
SNCA-204ENST00000394989 K7EQZ3 153 aa8.61□□□□□ -1.03
SNCA-204ENST00000394989 hDV103S1A0JD37 113 aa8.61□□□□□ -1.03
SNCA-204ENST00000394989 KRTAP13-1Q8IUC0 172 aa8.61□□□□□ -1.03
SNCA-204ENST00000394989 DNAH6Q9C0G6 4158 aa8.6□□□□□ -1.03
SNCA-204ENST00000394989 A8MUN3 132 aa8.59□□□□□ -1.03
SNCA-204ENST00000394989 UBE2AP49459 152 aa8.59□□□□□ -1.03
SNCA-204ENST00000394989 SPRR1BP22528 89 aa8.59□□□□□ -1.04
SNCA-204ENST00000394989 RTL8CO15255 209 aa8.58□□□□□ -1.04
SNCA-204ENST00000394989 PMAIP1Q13794 54 aa8.58□□□□□ -1.04
SNCA-204ENST00000394989 TRAV22A0A0B4J277 110 aa8.57□□□□□ -1.04
SNCA-204ENST00000394989 DNAH5Q8TE73 4624 aa8.56□□□□□ -1.04
SNCA-204ENST00000394989 DSCR10P59022 87 aa8.56□□□□□ -1.04
SNCA-204ENST00000394989 DNAH11Q96DT5 4516 aa8.56□□□□□ -1.04
SNCA-204ENST00000394989 HYDINQ4G0P3 5121 aa8.55□□□□□ -1.04
SNCA-204ENST00000394989 SPTSSBQ8NFR3 76 aa8.54□□□□□ -1.04
SNCA-204ENST00000394989 A0A087WSZ3 146 aa8.53□□□□□ -1.04
SNCA-204ENST00000394989 RPL37AP61513 92 aaKnown RBP8.53□□□□□ -1.04
SNCA-204ENST00000394989 LINC00208Q96KT6 92 aa8.52□□□□□ -1.05
SNCA-204ENST00000394989 C1orf134Q5TEV5 83 aa8.52□□□□□ -1.05
SNCA-204ENST00000394989 LY6G6CO95867 125 aa8.51□□□□□ -1.05
SNCA-204ENST00000394989 PLAC8Q9NZF1 115 aa8.5□□□□□ -1.05
SNCA-204ENST00000394989 PKD1P98161 4303 aa8.5□□□□□ -1.05
SNCA-204ENST00000394989 ALMS1Q8TCU4 4167 aa8.5□□□□□ -1.05
SNCA-204ENST00000394989 FAT2Q9NYQ8 4349 aa8.49□□□□□ -1.05
SNCA-204ENST00000394989 IGLV5-52A0A0A0MRZ9 124 aa8.49□□□□□ -1.05
SNCA-204ENST00000394989 PSORS1C2Q9UIG4 136 aa8.49□□□□□ -1.05
SNCA-204ENST00000394989 CHKB-CPT1BH3BT56 60 aa8.48□□□□□ -1.05
SNCA-204ENST00000394989 PRR15Q8IV56 129 aa8.48□□□□□ -1.05
SNCA-204ENST00000394989 HCG22E2RYF7 251 aa8.47□□□□□ -1.05
SNCA-204ENST00000394989 Q1T7F1 81 aa8.47□□□□□ -1.05
SNCA-204ENST00000394989 KRTAP21-3Q3LHN1 58 aa8.47□□□□□ -1.05
SNCA-204ENST00000394989 LINC00483Q53H64 154 aa8.44□□□□□ -1.06
SNCA-204ENST00000394989 PRR15LQ9BU68 103 aa8.43□□□□□ -1.06
SNCA-204ENST00000394989 MP68P56378 58 aa8.43□□□□□ -1.06
SNCA-204ENST00000394989 ZCCHC13Q8WW36 166 aaKnown RBP8.43□□□□□ -1.06
SNCA-204ENST00000394989 IGLV9-49A0A0B4J1Y8 123 aa8.42□□□□□ -1.06
SNCA-204ENST00000394989 KRTAP10-2P60368 255 aa8.42□□□□□ -1.06
SNCA-204ENST00000394989 LINC00472Q9H8W2 130 aa8.42□□□□□ -1.06
SNCA-204ENST00000394989 ZNF861PO60384 105 aa8.4□□□□□ -1.06
SNCA-204ENST00000394989 LRP1BQ9NZR2 4599 aa8.4□□□□□ -1.06
SNCA-204ENST00000394989 WWC2-AS2Q96NR7 200 aa8.4□□□□□ -1.07
SNCA-204ENST00000394989 ANAPC11Q9NYG5 84 aa8.4□□□□□ -1.07
SNCA-204ENST00000394989 Q5VV11 94 aa8.39□□□□□ -1.07
SNCA-204ENST00000394989 LCE6AA0A183 80 aa8.37□□□□□ -1.07
SNCA-204ENST00000394989 H0Y9P7 68 aa8.37□□□□□ -1.07
SNCA-204ENST00000394989 A6NED7 52 aa8.36□□□□□ -1.07
SNCA-204ENST00000394989 PCOTHQ58A44 107 aa8.36□□□□□ -1.07
SNCA-204ENST00000394989 ZNF706Q9Y5V0 76 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms