RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 HIST1H2BKO60814 126 aa10.82□□□□□ -0.68
TRAF4-203ENST00000394925 HIST1H2BJP06899 126 aa10.82□□□□□ -0.68
TRAF4-203ENST00000394925 HIST1H2BOP23527 126 aa10.82□□□□□ -0.68
TRAF4-203ENST00000394925 HIST1H2BBP33778 126 aa10.82□□□□□ -0.68
TRAF4-203ENST00000394925 HIST1H2BDP58876 126 aa10.82□□□□□ -0.68
TRAF4-203ENST00000394925 HIST1H2BCP62807 126 aa10.82□□□□□ -0.68
TRAF4-203ENST00000394925 HIST2H2BEQ16778 126 aa10.82□□□□□ -0.68
TRAF4-203ENST00000394925 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.82□□□□□ -0.68
TRAF4-203ENST00000394925 HIST1H2BHQ93079 126 aa10.82□□□□□ -0.68
TRAF4-203ENST00000394925 HIST1H2BNQ99877 126 aa10.82□□□□□ -0.68
TRAF4-203ENST00000394925 HIST1H2BMQ99879 126 aa10.82□□□□□ -0.68
TRAF4-203ENST00000394925 ANKRD39Q53RE8 183 aa10.81□□□□□ -0.68
TRAF4-203ENST00000394925 Q6ZQY7 126 aa10.8□□□□□ -0.68
TRAF4-203ENST00000394925 Q96NJ1 140 aa10.8□□□□□ -0.68
TRAF4-203ENST00000394925 VAMP3Q15836 100 aa10.79□□□□□ -0.68
TRAF4-203ENST00000394925 LINC00575Q6W349 94 aa10.79□□□□□ -0.68
TRAF4-203ENST00000394925 FCGBPQ9Y6R7 5405 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-203ENST00000394925 KRTDAPP60985 99 aa10.78□□□□□ -0.68
TRAF4-203ENST00000394925 OCIAD2Q56VL3 154 aa10.78□□□□□ -0.68
TRAF4-203ENST00000394925 hADV29S1A0JD25 119 aa10.76□□□□□ -0.69
TRAF4-203ENST00000394925 LST1O00453 97 aa10.75□□□□□ -0.69
TRAF4-203ENST00000394925 TRBV20-1A0A075B6N2 111 aa10.74□□□□□ -0.69
TRAF4-203ENST00000394925 ATOH7Q8N100 152 aa10.74□□□□□ -0.69
TRAF4-203ENST00000394925 C20orf166-AS1Q96NR2 134 aa10.72□□□□□ -0.69
TRAF4-203ENST00000394925 A8MUU9 505 aa10.69□□□□□ -0.7
TRAF4-203ENST00000394925 MT2AP02795 61 aa10.69□□□□□ -0.7
TRAF4-203ENST00000394925 H3BUT2 72 aa10.67□□□□□ -0.7
TRAF4-203ENST00000394925 KRTAP19-1Q8IUB9 90 aa10.67□□□□□ -0.7
TRAF4-203ENST00000394925 SNHG12Q9BXW3 62 aa10.67□□□□□ -0.7
TRAF4-203ENST00000394925 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-203ENST00000394925 LCE2BO14633 110 aa10.64□□□□□ -0.71
TRAF4-203ENST00000394925 PPDPFLQ8WWR9 84 aa10.63□□□□□ -0.71
TRAF4-203ENST00000394925 SS18L2Q9UHA2 77 aa10.62□□□□□ -0.71
TRAF4-203ENST00000394925 SCGB1D1O95968 90 aa10.61□□□□□ -0.71
TRAF4-203ENST00000394925 MT1FP04733 61 aa10.61□□□□□ -0.71
TRAF4-203ENST00000394925 COA6Q5JTJ3 125 aaKnown RBP10.61□□□□□ -0.71
TRAF4-203ENST00000394925 FAM236DA0A1B0GTK5 79 aa10.6□□□□□ -0.71
TRAF4-203ENST00000394925 FAM236CP0DP71 79 aa10.6□□□□□ -0.71
TRAF4-203ENST00000394925 DSCR10P59022 87 aa10.57□□□□□ -0.72
TRAF4-203ENST00000394925 BVES-AS1Q5T3Y7 98 aa10.56□□□□□ -0.72
TRAF4-203ENST00000394925 KRTAP9-3Q9BYQ3 159 aa10.56□□□□□ -0.72
TRAF4-203ENST00000394925 KRTAP10-10P60014 251 aa10.55□□□□□ -0.72
TRAF4-203ENST00000394925 SNRPEP62304 92 aaKnown RBP10.55□□□□□ -0.72
TRAF4-203ENST00000394925 KRTAP16-1A8MUX0 517 aa10.54□□□□□ -0.72
TRAF4-203ENST00000394925 TEN1Q86WV5 123 aa10.54□□□□□ -0.72
TRAF4-203ENST00000394925 C12orf57Q99622 126 aa10.54□□□□□ -0.72
TRAF4-203ENST00000394925 A0A087WSZ3 146 aa10.53□□□□□ -0.72
TRAF4-203ENST00000394925 MACF1Q9UPN3 7388 aaKnown RBP10.52□□□□□ -0.73
TRAF4-203ENST00000394925 RBM12B-AS1Q9P1G2 102 aa10.49□□□□□ -0.73
TRAF4-203ENST00000394925 NDUFV3P56181 108 aaKnown RBP10.47□□□□□ -0.73
TRAF4-203ENST00000394925 SIGMAR1Q99720 223 aa10.47□□□□□ -0.73
TRAF4-203ENST00000394925 SYNE2Q8WXH0 6885 aaKnown RBP10.47□□□□□ -0.73
TRAF4-203ENST00000394925 HRES1P13985 223 aa10.46□□□□□ -0.73
TRAF4-203ENST00000394925 MPLKIPQ8TAP9 179 aa10.46□□□□□ -0.73
TRAF4-203ENST00000394925 HSBP1L1C9JCN9 74 aa10.44□□□□□ -0.74
TRAF4-203ENST00000394925 LINC00313P59037 77 aa10.44□□□□□ -0.74
TRAF4-203ENST00000394925 HIST1H4GQ99525 98 aa10.43□□□□□ -0.74
TRAF4-203ENST00000394925 H3BMG7 143 aa10.41□□□□□ -0.74
TRAF4-203ENST00000394925 SNCGO76070 127 aa10.41□□□□□ -0.74
TRAF4-203ENST00000394925 FAM218AQ96MZ4 157 aa10.39□□□□□ -0.75
TRAF4-203ENST00000394925 IGKV4-1P06312 121 aa10.38□□□□□ -0.75
TRAF4-203ENST00000394925 NOTCH2NLQ7Z3S9 236 aa10.38□□□□□ -0.75
TRAF4-203ENST00000394925 LINC00846Q9NV44 126 aa10.37□□□□□ -0.75
TRAF4-203ENST00000394925 A0A1W2PNM2 257 aa10.36□□□□□ -0.75
TRAF4-203ENST00000394925 H0YGX0 51 aa10.36□□□□□ -0.75
TRAF4-203ENST00000394925 FABP2P12104 132 aa10.35□□□□□ -0.75
TRAF4-203ENST00000394925 RAB37Q96AX2 223 aa10.33□□□□□ -0.76
TRAF4-203ENST00000394925 KRTAP19-6Q3LI70 58 aa10.32□□□□□ -0.76
TRAF4-203ENST00000394925 HIST1H2BLQ99880 126 aa10.32□□□□□ -0.76
TRAF4-203ENST00000394925 HIST3H2BBQ8N257 126 aa10.31□□□□□ -0.76
TRAF4-203ENST00000394925 DEFB116Q30KQ4 102 aa10.3□□□□□ -0.76
TRAF4-203ENST00000394925 S100A2P29034 98 aa10.29□□□□□ -0.76
TRAF4-203ENST00000394925 GHRHP01286 108 aa10.28□□□□□ -0.76
TRAF4-203ENST00000394925 MTURNQ8N3F0 131 aa10.28□□□□□ -0.76
TRAF4-203ENST00000394925 IGHV6-1A0A0B4J1U7 121 aa10.26□□□□□ -0.77
TRAF4-203ENST00000394925 COX8AP10176 69 aa10.26□□□□□ -0.77
TRAF4-203ENST00000394925 TRBV7-4A0A0J9YYF1 115 aa10.25□□□□□ -0.77
TRAF4-203ENST00000394925 A0A0B4J2C4 111 aa10.24□□□□□ -0.77
TRAF4-203ENST00000394925 A0A1B0GV72 72 aa10.24□□□□□ -0.77
TRAF4-203ENST00000394925 A0A1B0GX51 115 aa10.24□□□□□ -0.77
TRAF4-203ENST00000394925 ANKRD29Q8N6D5 301 aa10.24□□□□□ -0.77
TRAF4-203ENST00000394925 LINC00472Q9H8W2 130 aa10.23□□□□□ -0.77
TRAF4-203ENST00000394925 DLEU1O43261 78 aa10.19□□□□□ -0.78
TRAF4-203ENST00000394925 SPINK7P58062 85 aa10.16□□□□□ -0.78
TRAF4-203ENST00000394925 C14orf144Q96I85 54 aa10.16□□□□□ -0.78
TRAF4-203ENST00000394925 ZCCHC13Q8WW36 166 aaKnown RBP10.15□□□□□ -0.78
TRAF4-203ENST00000394925 A8MWP4 228 aa10.14□□□□□ -0.79
TRAF4-203ENST00000394925 C8orf87E5RJ46 101 aa10.14□□□□□ -0.79
TRAF4-203ENST00000394925 TRACP01848 142 aa10.14□□□□□ -0.79
TRAF4-203ENST00000394925 CCKP06307 115 aa10.14□□□□□ -0.79
TRAF4-203ENST00000394925 KRTAP6-3Q3LI67 103 aa10.14□□□□□ -0.79
TRAF4-203ENST00000394925 HIGD1BQ9P298 99 aa10.14□□□□□ -0.79
TRAF4-203ENST00000394925 PRO1854Q9UHT4 67 aa10.14□□□□□ -0.79
TRAF4-203ENST00000394925 A0A1B0GVX0 72 aa10.13□□□□□ -0.79
TRAF4-203ENST00000394925 TRIAP1O43715 76 aa10.12□□□□□ -0.79
TRAF4-203ENST00000394925 ORMDL1Q9P0S3 153 aa10.12□□□□□ -0.79
TRAF4-203ENST00000394925 DNAL4O96015 105 aa10.11□□□□□ -0.79
TRAF4-203ENST00000394925 Q8N9P0 234 aaPredicted RBP10.11□□□□□ -0.79
TRAF4-203ENST00000394925 S100A6P06703 90 aa10.09□□□□□ -0.79
TRAF4-203ENST00000394925 C2orf91Q6ZV80 131 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms