RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 ANAPC13Q9BS18 74 aa14.11□□□□□ -0.15
CNN3-202ENST00000394202 KRTAP17-1Q9BYP8 105 aa14.11□□□□□ -0.15
CNN3-202ENST00000394202 KRTAP10-4P60372 401 aaPredicted RBP14.1□□□□□ -0.15
CNN3-202ENST00000394202 TRBV7-7A0A0K0K1E9 115 aa14.09□□□□□ -0.15
CNN3-202ENST00000394202 Q8N377 158 aa14.09□□□□□ -0.15
CNN3-202ENST00000394202 NDUFV3P56181 108 aaKnown RBP14.08□□□□□ -0.16
CNN3-202ENST00000394202 OBSCN-AS1Q96MR7 158 aa14.06□□□□□ -0.16
CNN3-202ENST00000394202 IGLV5-48A0A075B6I7 105 aa14.05□□□□□ -0.16
CNN3-202ENST00000394202 LINC00643Q86TS7 51 aa14.05□□□□□ -0.16
CNN3-202ENST00000394202 IMUPQ9GZP8 106 aa14.05□□□□□ -0.16
CNN3-202ENST00000394202 GAGE2AQ6NT46 116 aa14.03□□□□□ -0.16
CNN3-202ENST00000394202 C3orf22Q8N5N4 141 aa14.03□□□□□ -0.16
CNN3-202ENST00000394202 TMEM256-PLSCR3K7ERE1 68 aa14.02□□□□□ -0.16
CNN3-202ENST00000394202 SPRR4Q96PI1 79 aa14.02□□□□□ -0.17
CNN3-202ENST00000394202 ANAPC11Q9NYG5 84 aa14□□□□□ -0.17
CNN3-202ENST00000394202 SMIM29Q86T20 159 aa13.98□□□□□ -0.17
CNN3-202ENST00000394202 FAM229AH3BQW9 127 aa13.98□□□□□ -0.17
CNN3-202ENST00000394202 Q5VSD8 79 aa13.97□□□□□ -0.17
CNN3-202ENST00000394202 C14orf132Q9NPU4 83 aa13.96□□□□□ -0.18
CNN3-202ENST00000394202 SPRR1BP22528 89 aa13.95□□□□□ -0.18
CNN3-202ENST00000394202 LAMTOR3Q9UHA4 124 aa13.94□□□□□ -0.18
CNN3-202ENST00000394202 GHRHP01286 108 aa13.93□□□□□ -0.18
CNN3-202ENST00000394202 LINC00483Q53H64 154 aa13.93□□□□□ -0.18
CNN3-202ENST00000394202 H3BQ85 93 aa13.92□□□□□ -0.18
CNN3-202ENST00000394202 PLA2G1BP04054 148 aaKnown RBP13.92□□□□□ -0.18
CNN3-202ENST00000394202 SPINK6Q6UWN8 80 aa13.92□□□□□ -0.18
CNN3-202ENST00000394202 ZNF706Q9Y5V0 76 aaPredicted RBP13.92□□□□□ -0.18
CNN3-202ENST00000394202 JMJD7-PLA2G4BH0Y9G9 81 aa13.92□□□□□ -0.18
CNN3-202ENST00000394202 BIRC6Q9NR09 4857 aa13.9□□□□□ -0.18
CNN3-202ENST00000394202 Q8N1X5 172 aa13.89□□□□□ -0.19
CNN3-202ENST00000394202 KRTAP1-4P0C5Y4 121 aa13.89□□□□□ -0.19
CNN3-202ENST00000394202 CCKP06307 115 aa13.86□□□□□ -0.19
CNN3-202ENST00000394202 PKHD1L1Q86WI1 4243 aa13.84□□□□□ -0.19
CNN3-202ENST00000394202 FAM236AA0A1B0GUQ0 79 aa13.84□□□□□ -0.19
CNN3-202ENST00000394202 FAM236BA0A1B0GV22 79 aa13.84□□□□□ -0.19
CNN3-202ENST00000394202 IGLV9-49A0A0B4J1Y8 123 aa13.83□□□□□ -0.2
CNN3-202ENST00000394202 Q6JHZ5 121 aa13.83□□□□□ -0.2
CNN3-202ENST00000394202 LINC00846Q9NV44 126 aa13.83□□□□□ -0.2
CNN3-202ENST00000394202 A0A087X002 238 aa13.82□□□□□ -0.2
CNN3-202ENST00000394202 A0A0G2JQZ4 141 aa13.82□□□□□ -0.2
CNN3-202ENST00000394202 CCDC179H3BU77 68 aa13.82□□□□□ -0.2
CNN3-202ENST00000394202 RBM3P98179 157 aaKnown RBP13.82□□□□□ -0.2
CNN3-202ENST00000394202 F8WEM9 126 aa13.78□□□□□ -0.2
CNN3-202ENST00000394202 KRTAP4-5Q9BYR2 181 aa13.78□□□□□ -0.2
CNN3-202ENST00000394202 KRTAP13-2Q52LG2 175 aa13.77□□□□□ -0.21
CNN3-202ENST00000394202 IGLV8-61A0A075B6I0 122 aa13.76□□□□□ -0.21
CNN3-202ENST00000394202 TRBV7-4A0A0J9YYF1 115 aa13.76□□□□□ -0.21
CNN3-202ENST00000394202 MOBPQ13875 183 aa13.76□□□□□ -0.21
CNN3-202ENST00000394202 C9orf153Q5TBE3 101 aa13.75□□□□□ -0.21
CNN3-202ENST00000394202 DSCR8Q96T75 97 aa13.74□□□□□ -0.21
CNN3-202ENST00000394202 HIST1H4AP62805 103 aaKnown RBP13.74□□□□□ -0.21
CNN3-202ENST00000394202 FAM229BQ4G0N7 80 aa13.74□□□□□ -0.21
CNN3-202ENST00000394202 IGFL1Q6UW32 110 aa13.73□□□□□ -0.21
CNN3-202ENST00000394202 LRP1Q07954 4544 aaKnown RBP13.73□□□□□ -0.21
CNN3-202ENST00000394202 Q6ZQT0 140 aa13.72□□□□□ -0.21
CNN3-202ENST00000394202 FLG2Q5D862 2391 aaPredicted RBP13.71□□□□□ -0.21
CNN3-202ENST00000394202 LOC110117498A0A087WWA1 95 aa13.71□□□□□ -0.21
CNN3-202ENST00000394202 CRYGAP11844 174 aa13.71□□□□□ -0.21
CNN3-202ENST00000394202 ATP5EP2Q5VTU8 51 aa13.71□□□□□ -0.22
CNN3-202ENST00000394202 PRR26Q8N8Z3 221 aa13.71□□□□□ -0.22
CNN3-202ENST00000394202 IGKV3D-7A0A0C4DH55 119 aa13.7□□□□□ -0.22
CNN3-202ENST00000394202 HERC2O95714 4834 aa13.69□□□□□ -0.22
CNN3-202ENST00000394202 ATOX1O00244 68 aa13.68□□□□□ -0.22
CNN3-202ENST00000394202 PDE6GP18545 87 aa13.67□□□□□ -0.22
CNN3-202ENST00000394202 Q8NBF4 154 aa13.67□□□□□ -0.22
CNN3-202ENST00000394202 A0A1W2PNM2 257 aa13.67□□□□□ -0.22
CNN3-202ENST00000394202 MYCBP2O75592 4640 aa13.67□□□□□ -0.22
CNN3-202ENST00000394202 SS18L2Q9UHA2 77 aa13.65□□□□□ -0.22
CNN3-202ENST00000394202 UQCRQO14949 82 aa13.65□□□□□ -0.22
CNN3-202ENST00000394202 UBL5Q9BZL1 73 aa13.65□□□□□ -0.22
CNN3-202ENST00000394202 FAT3Q8TDW7 4589 aa13.6□□□□□ -0.23
CNN3-202ENST00000394202 COX7CP15954 63 aa13.6□□□□□ -0.23
CNN3-202ENST00000394202 SSBP3-AS1Q7Z2R9 100 aa13.6□□□□□ -0.23
CNN3-202ENST00000394202 TYMSOSQ8TAI1 123 aa13.6□□□□□ -0.23
CNN3-202ENST00000394202 HRCT1Q6UXD1 115 aa13.6□□□□□ -0.23
CNN3-202ENST00000394202 A0A087WVE0 104 aa13.56□□□□□ -0.24
CNN3-202ENST00000394202 ABCA13Q86UQ4 5058 aa13.56□□□□□ -0.24
CNN3-202ENST00000394202 TNXBP22105 4242 aa13.55□□□□□ -0.24
CNN3-202ENST00000394202 SERP2Q8N6R1 65 aa13.51□□□□□ -0.25
CNN3-202ENST00000394202 KRTAP10-8P60410 259 aa13.49□□□□□ -0.25
CNN3-202ENST00000394202 A0A087WSZ3 146 aa13.49□□□□□ -0.25
CNN3-202ENST00000394202 Q6ZVQ6 151 aa13.49□□□□□ -0.25
CNN3-202ENST00000394202 CXCL6P80162 114 aa13.45□□□□□ -0.26
CNN3-202ENST00000394202 LINC00304Q8N9R0 145 aa13.44□□□□□ -0.26
CNN3-202ENST00000394202 CD164Q04900 197 aa13.43□□□□□ -0.26
CNN3-202ENST00000394202 MT1HL1P0DM35 61 aa13.43□□□□□ -0.26
CNN3-202ENST00000394202 A0A1B0GW54 56 aa13.4□□□□□ -0.26
CNN3-202ENST00000394202 C4orf48Q5BLP8 95 aa13.39□□□□□ -0.27
CNN3-202ENST00000394202 SPINK1P00995 79 aa13.35□□□□□ -0.27
CNN3-202ENST00000394202 OXTP01178 125 aa13.35□□□□□ -0.27
CNN3-202ENST00000394202 DMBT1Q9UGM3 2413 aaPredicted RBP13.35□□□□□ -0.27
CNN3-202ENST00000394202 NREPQ16612 68 aa13.34□□□□□ -0.27
CNN3-202ENST00000394202 SPAG11AQ6PDA7 123 aa13.32□□□□□ -0.28
CNN3-202ENST00000394202 DEFB116Q30KQ4 102 aa13.31□□□□□ -0.28
CNN3-202ENST00000394202 SMIM20Q8N5G0 67 aa13.31□□□□□ -0.28
CNN3-202ENST00000394202 KRTAP29-1A8MX34 341 aaPredicted RBP13.3□□□□□ -0.28
CNN3-202ENST00000394202 Q96NJ1 140 aa13.29□□□□□ -0.28
CNN3-202ENST00000394202 LINC00472Q9H8W2 130 aa13.28□□□□□ -0.28
CNN3-202ENST00000394202 Q5XG85 94 aa13.27□□□□□ -0.28
CNN3-202ENST00000394202 TRAV7A0A075B6U4 112 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms