RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 C7orf33Q8WU49 177 aa6.39□□□□□ -1.39
PSEN1-204ENST00000394164 LINC00208Q96KT6 92 aa6.39□□□□□ -1.39
PSEN1-204ENST00000394164 DNAH3Q8TD57 4116 aa6.39□□□□□ -1.39
PSEN1-204ENST00000394164 IGKV2-24A0A0C4DH68 120 aa6.38□□□□□ -1.39
PSEN1-204ENST00000394164 C16orf90A8MZG2 172 aa6.38□□□□□ -1.39
PSEN1-204ENST00000394164 RBM12B-AS1Q9P1G2 102 aa6.38□□□□□ -1.39
PSEN1-204ENST00000394164 DNAH10OSP0CZ25 163 aa6.37□□□□□ -1.39
PSEN1-204ENST00000394164 LCE6AA0A183 80 aa6.37□□□□□ -1.39
PSEN1-204ENST00000394164 HCG22E2RYF7 251 aa6.36□□□□□ -1.39
PSEN1-204ENST00000394164 RPL37AP61513 92 aaKnown RBP6.36□□□□□ -1.39
PSEN1-204ENST00000394164 UBE2BP63146 152 aa6.36□□□□□ -1.39
PSEN1-204ENST00000394164 B9D2Q9BPU9 175 aa6.36□□□□□ -1.39
PSEN1-204ENST00000394164 IGLV5-48A0A075B6I7 105 aa6.35□□□□□ -1.39
PSEN1-204ENST00000394164 A6NED7 52 aa6.35□□□□□ -1.39
PSEN1-204ENST00000394164 UBE2AP49459 152 aa6.34□□□□□ -1.39
PSEN1-204ENST00000394164 CYP4F30PQ9H0H9 118 aa6.34□□□□□ -1.39
PSEN1-204ENST00000394164 DNAH7Q8WXX0 4024 aa6.34□□□□□ -1.39
PSEN1-204ENST00000394164 Q8NBF4 154 aa6.34□□□□□ -1.39
PSEN1-204ENST00000394164 Q9BRP9 147 aa6.34□□□□□ -1.39
PSEN1-204ENST00000394164 KRTAP1-5Q9BYS1 174 aa6.34□□□□□ -1.39
PSEN1-204ENST00000394164 MP68P56378 58 aa6.33□□□□□ -1.4
PSEN1-204ENST00000394164 KTN1-AS1Q86SY8 53 aa6.33□□□□□ -1.4
PSEN1-204ENST00000394164 UBE2DNLQ8IWF7 75 aa6.33□□□□□ -1.4
PSEN1-204ENST00000394164 Q8N9P0 234 aaPredicted RBP6.33□□□□□ -1.4
PSEN1-204ENST00000394164 LCA10Q71F78 164 aa6.33□□□□□ -1.4
PSEN1-204ENST00000394164 KRTAP7-1Q8IUC3 87 aa6.32□□□□□ -1.4
PSEN1-204ENST00000394164 DNAH9Q9NYC9 4486 aa6.31□□□□□ -1.4
PSEN1-204ENST00000394164 MDFIQ99750 246 aa6.31□□□□□ -1.4
PSEN1-204ENST00000394164 KCNQ1DNQ9H478 68 aa6.3□□□□□ -1.4
PSEN1-204ENST00000394164 H0Y9P7 68 aa6.3□□□□□ -1.4
PSEN1-204ENST00000394164 NDUFB1O75438 58 aa6.3□□□□□ -1.4
PSEN1-204ENST00000394164 CHTF8P0CG12 524 aa6.29□□□□□ -1.4
PSEN1-204ENST00000394164 Q6ZRX8 168 aa6.29□□□□□ -1.4
PSEN1-204ENST00000394164 A0A087WSZ3 146 aa6.28□□□□□ -1.4
PSEN1-204ENST00000394164 PRLHP81277 87 aa6.28□□□□□ -1.4
PSEN1-204ENST00000394164 DNAH1Q9P2D7 4330 aa6.28□□□□□ -1.4
PSEN1-204ENST00000394164 IGLV1-50A0A075B6I6 118 aa6.28□□□□□ -1.4
PSEN1-204ENST00000394164 LINC00476Q8WZB0 136 aa6.28□□□□□ -1.4
PSEN1-204ENST00000394164 A0A096LNI7 61 aa6.28□□□□□ -1.4
PSEN1-204ENST00000394164 TNP2Q05952 138 aa6.27□□□□□ -1.41
PSEN1-204ENST00000394164 LIMD2Q9BT23 127 aa6.27□□□□□ -1.41
PSEN1-204ENST00000394164 DHRS4-AS1Q9P1J3 65 aa6.27□□□□□ -1.41
PSEN1-204ENST00000394164 TGP01266 2768 aa6.27□□□□□ -1.41
PSEN1-204ENST00000394164 SPRR4Q96PI1 79 aa6.26□□□□□ -1.41
PSEN1-204ENST00000394164 PCOTHQ58A44 107 aa6.26□□□□□ -1.41
PSEN1-204ENST00000394164 SPAG11AQ6PDA7 123 aa6.25□□□□□ -1.41
PSEN1-204ENST00000394164 PLECQ15149 4684 aaKnown RBP6.25□□□□□ -1.41
PSEN1-204ENST00000394164 COA5Q86WW8 74 aa6.25□□□□□ -1.41
PSEN1-204ENST00000394164 TLX1NBP0CAT3 122 aa6.24□□□□□ -1.41
PSEN1-204ENST00000394164 IGFL1Q6UW32 110 aa6.24□□□□□ -1.41
PSEN1-204ENST00000394164 CASC2Q6XLA1 102 aa6.23□□□□□ -1.41
PSEN1-204ENST00000394164 ATP11AUNQ6ZP68 121 aa6.23□□□□□ -1.41
PSEN1-204ENST00000394164 REG3GQ6UW15 175 aa6.23□□□□□ -1.41
PSEN1-204ENST00000394164 A6NN06 94 aa6.23□□□□□ -1.41
PSEN1-204ENST00000394164 KRTAP4-16G5E9R7 235 aaPredicted RBP6.23□□□□□ -1.41
PSEN1-204ENST00000394164 PHF5AQ7RTV0 110 aaKnown RBP6.23□□□□□ -1.41
PSEN1-204ENST00000394164 KRTAP11-1Q8IUC1 163 aa6.21□□□□□ -1.41
PSEN1-204ENST00000394164 Q75L30 129 aa6.2□□□□□ -1.42
PSEN1-204ENST00000394164 APLNQ9ULZ1 77 aa6.2□□□□□ -1.42
PSEN1-204ENST00000394164 MOBPQ13875 183 aa6.2□□□□□ -1.42
PSEN1-204ENST00000394164 A0A1B0GW54 56 aa6.2□□□□□ -1.42
PSEN1-204ENST00000394164 PRKDCP78527 4128 aaKnown RBP6.19□□□□□ -1.42
PSEN1-204ENST00000394164 NDUFS5O43920 106 aa6.19□□□□□ -1.42
PSEN1-204ENST00000394164 H0Y9J4 135 aa6.19□□□□□ -1.42
PSEN1-204ENST00000394164 SPINK7P58062 85 aa6.19□□□□□ -1.42
PSEN1-204ENST00000394164 SPRR1AP35321 89 aa6.18□□□□□ -1.42
PSEN1-204ENST00000394164 CNBPP62633 177 aaKnown RBP6.18□□□□□ -1.42
PSEN1-204ENST00000394164 PLA2G2DQ9UNK4 145 aa6.18□□□□□ -1.42
PSEN1-204ENST00000394164 STARD9Q9P2P6 4700 aa6.18□□□□□ -1.42
PSEN1-204ENST00000394164 LOC101927531A0A1B0GV80 90 aa6.18□□□□□ -1.42
PSEN1-204ENST00000394164 PANO1I0J062 215 aa6.18□□□□□ -1.42
PSEN1-204ENST00000394164 PRAC1Q96KF2 57 aa6.18□□□□□ -1.42
PSEN1-204ENST00000394164 SPANXA2-OT1Q8N9U9 137 aa6.17□□□□□ -1.42
PSEN1-204ENST00000394164 CDC42SE1Q9NRR8 79 aa6.17□□□□□ -1.42
PSEN1-204ENST00000394164 MEGF8Q7Z7M0 2845 aa6.17□□□□□ -1.42
PSEN1-204ENST00000394164 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
PSEN1-204ENST00000394164 C7orf65Q6ZTY9 151 aa6.17□□□□□ -1.42
PSEN1-204ENST00000394164 IGLV5-37A0A075B6J1 123 aa6.17□□□□□ -1.42
PSEN1-204ENST00000394164 C9orf163Q8N9P6 203 aa6.16□□□□□ -1.42
PSEN1-204ENST00000394164 KMT2AQ03164 3969 aa6.14□□□□□ -1.43
PSEN1-204ENST00000394164 DNHD1Q96M86 4753 aa6.14□□□□□ -1.43
PSEN1-204ENST00000394164 NBDYA0A0U1RRE5 68 aa6.13□□□□□ -1.43
PSEN1-204ENST00000394164 ADM2Q7Z4H4 148 aa6.13□□□□□ -1.43
PSEN1-204ENST00000394164 C4orf48Q5BLP8 95 aa6.12□□□□□ -1.43
PSEN1-204ENST00000394164 C8orf87E5RJ46 101 aa6.12□□□□□ -1.43
PSEN1-204ENST00000394164 IGLV7-46A0A075B6I9 117 aa6.11□□□□□ -1.43
PSEN1-204ENST00000394164 A8MWP4 228 aa6.1□□□□□ -1.43
PSEN1-204ENST00000394164 LINC00313P59037 77 aa6.1□□□□□ -1.43
PSEN1-204ENST00000394164 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.1□□□□□ -1.43
PSEN1-204ENST00000394164 H3BPC8 53 aa6.09□□□□□ -1.43
PSEN1-204ENST00000394164 C14orf177Q52M58 125 aa6.08□□□□□ -1.44
PSEN1-204ENST00000394164 LINC01558Q9Y6Z2 57 aa6.08□□□□□ -1.44
PSEN1-204ENST00000394164 IGLV9-49A0A0B4J1Y8 123 aa6.08□□□□□ -1.44
PSEN1-204ENST00000394164 FRAS1Q86XX4 4008 aa6.08□□□□□ -1.44
PSEN1-204ENST00000394164 PRR26Q8N8Z3 221 aa6.07□□□□□ -1.44
PSEN1-204ENST00000394164 ANAPC11Q9NYG5 84 aa6.07□□□□□ -1.44
PSEN1-204ENST00000394164 MMP24-AS1A0A0U1RRL7 71 aa6.07□□□□□ -1.44
PSEN1-204ENST00000394164 HRES1P13985 223 aa6.07□□□□□ -1.44
PSEN1-204ENST00000394164 NUPR2A6NF83 97 aa6.07□□□□□ -1.44
PSEN1-204ENST00000394164 LINC00472Q9H8W2 130 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms