RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 IGKV2-24A0A0C4DH68 120 aa3.76□□□□□ -1.81
CASC3-202ENST00000394114 LINC00313P59037 77 aa3.76□□□□□ -1.81
CASC3-202ENST00000394114 C6orf99Q4VX62 202 aa3.76□□□□□ -1.81
CASC3-202ENST00000394114 KRTAP19-1Q8IUB9 90 aa3.76□□□□□ -1.81
CASC3-202ENST00000394114 BIRC6Q9NR09 4857 aa3.75□□□□□ -1.81
CASC3-202ENST00000394114 IGLV7-46A0A075B6I9 117 aa3.75□□□□□ -1.81
CASC3-202ENST00000394114 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
CASC3-202ENST00000394114 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
CASC3-202ENST00000394114 CCKP06307 115 aa3.75□□□□□ -1.81
CASC3-202ENST00000394114 LINC01600Q96MT4 127 aa3.75□□□□□ -1.81
CASC3-202ENST00000394114 Q6ZRN7 208 aaPredicted RBP3.74□□□□□ -1.81
CASC3-202ENST00000394114 IGLV6-57P01721 117 aa3.74□□□□□ -1.81
CASC3-202ENST00000394114 A0A096LNI7 61 aa3.74□□□□□ -1.81
CASC3-202ENST00000394114 TRBV10-2A0A0K0K1G8 114 aa3.74□□□□□ -1.81
CASC3-202ENST00000394114 LRCOL1A6NCL2 159 aa3.74□□□□□ -1.81
CASC3-202ENST00000394114 HECTD4Q9Y4D8 3996 aa3.73□□□□□ -1.81
CASC3-202ENST00000394114 TRAV23DV6A0A075B6W5 121 aa3.73□□□□□ -1.81
CASC3-202ENST00000394114 DNAL4O96015 105 aa3.73□□□□□ -1.81
CASC3-202ENST00000394114 TLX1NBP0CAT3 122 aa3.73□□□□□ -1.81
CASC3-202ENST00000394114 MP68P56378 58 aa3.73□□□□□ -1.81
CASC3-202ENST00000394114 LCA10Q71F78 164 aa3.73□□□□□ -1.81
CASC3-202ENST00000394114 H0YGX0 51 aa3.73□□□□□ -1.81
CASC3-202ENST00000394114 KRTAP7-1Q8IUC3 87 aa3.73□□□□□ -1.81
CASC3-202ENST00000394114 C7orf33Q8WU49 177 aa3.73□□□□□ -1.81
CASC3-202ENST00000394114 SRRM2Q9UQ35 2752 aaKnown RBP3.72□□□□□ -1.81
CASC3-202ENST00000394114 BAALC-AS2P0C853 105 aa3.72□□□□□ -1.81
CASC3-202ENST00000394114 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
CASC3-202ENST00000394114 Q6ZR54 194 aa3.72□□□□□ -1.81
CASC3-202ENST00000394114 C20orf197Q8N268 126 aa3.72□□□□□ -1.81
CASC3-202ENST00000394114 HIST1H4AP62805 103 aaKnown RBP3.72□□□□□ -1.81
CASC3-202ENST00000394114 C14orf177Q52M58 125 aa3.72□□□□□ -1.81
CASC3-202ENST00000394114 LINC00643Q86TS7 51 aa3.72□□□□□ -1.81
CASC3-202ENST00000394114 IGHV6-1A0A0B4J1U7 121 aa3.71□□□□□ -1.82
CASC3-202ENST00000394114 FAM229BQ4G0N7 80 aa3.71□□□□□ -1.82
CASC3-202ENST00000394114 DIRC1Q969H9 104 aa3.71□□□□□ -1.82
CASC3-202ENST00000394114 A0A087WTM6 91 aa3.71□□□□□ -1.82
CASC3-202ENST00000394114 Q8N814 137 aa3.71□□□□□ -1.82
CASC3-202ENST00000394114 C22orf24Q9Y442 160 aa3.71□□□□□ -1.82
CASC3-202ENST00000394114 A0A1W2PNN7 141 aa3.7□□□□□ -1.82
CASC3-202ENST00000394114 C1orf134Q5TEV5 83 aa3.7□□□□□ -1.82
CASC3-202ENST00000394114 SMCR5Q8TEV8 140 aa3.7□□□□□ -1.82
CASC3-202ENST00000394114 LINC00167Q96N53 147 aa3.7□□□□□ -1.82
CASC3-202ENST00000394114 ALMS1Q8TCU4 4167 aa3.7□□□□□ -1.82
CASC3-202ENST00000394114 DNAH17Q9UFH2 4485 aa3.7□□□□□ -1.82
CASC3-202ENST00000394114 SACSQ9NZJ4 4579 aa3.7□□□□□ -1.82
CASC3-202ENST00000394114 C16orf90A8MZG2 172 aa3.7□□□□□ -1.82
CASC3-202ENST00000394114 A8MU10 97 aa3.69□□□□□ -1.82
CASC3-202ENST00000394114 PANO1I0J062 215 aa3.69□□□□□ -1.82
CASC3-202ENST00000394114 COX7BP24311 80 aa3.69□□□□□ -1.82
CASC3-202ENST00000394114 LINC00575Q6W349 94 aa3.69□□□□□ -1.82
CASC3-202ENST00000394114 C9orf163Q8N9P6 203 aa3.69□□□□□ -1.82
CASC3-202ENST00000394114 SPTSSBQ8NFR3 76 aa3.69□□□□□ -1.82
CASC3-202ENST00000394114 H7BZZ5 65 aa3.69□□□□□ -1.82
CASC3-202ENST00000394114 KRTAP10-2P60368 255 aa3.69□□□□□ -1.82
CASC3-202ENST00000394114 DNAH6Q9C0G6 4158 aa3.69□□□□□ -1.82
CASC3-202ENST00000394114 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
CASC3-202ENST00000394114 Q6ZQY7 126 aa3.68□□□□□ -1.82
CASC3-202ENST00000394114 Q8N377 158 aa3.68□□□□□ -1.82
CASC3-202ENST00000394114 ORMDL1Q9P0S3 153 aa3.68□□□□□ -1.82
CASC3-202ENST00000394114 IGLV1-50A0A075B6I6 118 aa3.68□□□□□ -1.82
CASC3-202ENST00000394114 ELOF1P60002 83 aaKnown RBP3.68□□□□□ -1.82
CASC3-202ENST00000394114 SDIM1Q6ZPB5 146 aa3.68□□□□□ -1.82
CASC3-202ENST00000394114 PHF5AQ7RTV0 110 aaKnown RBP3.68□□□□□ -1.82
CASC3-202ENST00000394114 EPPK1P58107 5090 aaKnown RBP3.68□□□□□ -1.82
CASC3-202ENST00000394114 C3orf84H3BNL1 204 aa3.68□□□□□ -1.82
CASC3-202ENST00000394114 RTL8CO15255 209 aa3.68□□□□□ -1.82
CASC3-202ENST00000394114 A0A087WVE0 104 aa3.67□□□□□ -1.82
CASC3-202ENST00000394114 UBE2BP63146 152 aa3.67□□□□□ -1.82
CASC3-202ENST00000394114 LINC01554Q52M75 96 aa3.67□□□□□ -1.82
CASC3-202ENST00000394114 KCNQ1DNQ9H478 68 aa3.67□□□□□ -1.82
CASC3-202ENST00000394114 PCLOQ9Y6V0 5065 aa3.67□□□□□ -1.82
CASC3-202ENST00000394114 ACYP1P07311 99 aa3.67□□□□□ -1.82
CASC3-202ENST00000394114 C7orf65Q6ZTY9 151 aa3.67□□□□□ -1.82
CASC3-202ENST00000394114 KRTAP11-1Q8IUC1 163 aa3.67□□□□□ -1.82
CASC3-202ENST00000394114 C14orf132Q9NPU4 83 aa3.67□□□□□ -1.82
CASC3-202ENST00000394114 DNAH11Q96DT5 4516 aa3.66□□□□□ -1.82
CASC3-202ENST00000394114 ETDCA0A1B0GVM5 59 aa3.66□□□□□ -1.82
CASC3-202ENST00000394114 PKHD1P08F94 4074 aa3.66□□□□□ -1.82
CASC3-202ENST00000394114 F8WEM9 126 aa3.66□□□□□ -1.82
CASC3-202ENST00000394114 DEFB105AQ8NG35 78 aa3.66□□□□□ -1.82
CASC3-202ENST00000394114 DNAH5Q8TE73 4624 aa3.65□□□□□ -1.82
CASC3-202ENST00000394114 RYR2Q92736 4967 aa3.65□□□□□ -1.82
CASC3-202ENST00000394114 FAT2Q9NYQ8 4349 aa3.65□□□□□ -1.82
CASC3-202ENST00000394114 PRLHP81277 87 aa3.65□□□□□ -1.82
CASC3-202ENST00000394114 Q6ZRX8 168 aa3.65□□□□□ -1.83
CASC3-202ENST00000394114 Q9BRP9 147 aa3.65□□□□□ -1.83
CASC3-202ENST00000394114 IGKV3D-7A0A0C4DH55 119 aa3.64□□□□□ -1.83
CASC3-202ENST00000394114 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
CASC3-202ENST00000394114 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
CASC3-202ENST00000394114 DNAH8Q96JB1 4490 aa3.64□□□□□ -1.83
CASC3-202ENST00000394114 PKD1P98161 4303 aa3.64□□□□□ -1.83
CASC3-202ENST00000394114 ERC2-IT1O76042 136 aa3.64□□□□□ -1.83
CASC3-202ENST00000394114 ST20-AS1Q8NBB2 130 aa3.64□□□□□ -1.83
CASC3-202ENST00000394114 SNURFQ9Y675 71 aa3.64□□□□□ -1.83
CASC3-202ENST00000394114 RYR1P21817 5038 aa3.64□□□□□ -1.83
CASC3-202ENST00000394114 SPRR1AP35321 89 aa3.63□□□□□ -1.83
CASC3-202ENST00000394114 SPACA4Q8TDM5 124 aa3.63□□□□□ -1.83
CASC3-202ENST00000394114 HIGD2AQ9BW72 106 aa3.63□□□□□ -1.83
CASC3-202ENST00000394114 IGKV2-30P06310 120 aa3.63□□□□□ -1.83
CASC3-202ENST00000394114 UBE2AP49459 152 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms