RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 FAM167A-AS1Q96KT0 104 aa2.15□□□□□ -2.07
XRN1-202ENST00000392981 APLNQ9ULZ1 77 aa2.15□□□□□ -2.07
XRN1-202ENST00000392981 A0A087WSZ3 146 aa2.14□□□□□ -2.07
XRN1-202ENST00000392981 DEFB136Q30KP8 78 aa2.14□□□□□ -2.07
XRN1-202ENST00000392981 KIF25-AS1Q9Y6Z4 181 aa2.14□□□□□ -2.07
XRN1-202ENST00000392981 RPL37AP61513 92 aaKnown RBP2.14□□□□□ -2.07
XRN1-202ENST00000392981 PRR14LQ5THK1 2151 aa2.14□□□□□ -2.07
XRN1-202ENST00000392981 MALRD1Q5VYJ5 2156 aa2.14□□□□□ -2.07
XRN1-202ENST00000392981 TRBV6-4A0A1B0GX49 114 aa2.14□□□□□ -2.07
XRN1-202ENST00000392981 DNAH6Q9C0G6 4158 aa2.14□□□□□ -2.07
XRN1-202ENST00000392981 A0A1W2PNN7 141 aa2.13□□□□□ -2.07
XRN1-202ENST00000392981 LINC00315P59091 139 aa2.13□□□□□ -2.07
XRN1-202ENST00000392981 LINC00846Q9NV44 126 aa2.13□□□□□ -2.07
XRN1-202ENST00000392981 TCF20Q9UGU0 1960 aaKnown RBP2.13□□□□□ -2.07
XRN1-202ENST00000392981 FBN1P35555 2871 aaKnown RBP2.13□□□□□ -2.07
XRN1-202ENST00000392981 HYDINQ4G0P3 5121 aa2.13□□□□□ -2.07
XRN1-202ENST00000392981 PKD1P98161 4303 aa2.13□□□□□ -2.07
XRN1-202ENST00000392981 Q5VV11 94 aa2.13□□□□□ -2.07
XRN1-202ENST00000392981 CENPEQ02224 2701 aa2.12□□□□□ -2.07
XRN1-202ENST00000392981 A0A1W2PNU3 283 aaPredicted RBP2.12□□□□□ -2.07
XRN1-202ENST00000392981 DEFB135Q30KP9 77 aa2.12□□□□□ -2.07
XRN1-202ENST00000392981 PSORS1C2Q9UIG4 136 aa2.12□□□□□ -2.07
XRN1-202ENST00000392981 ROS1P08922 2347 aa2.12□□□□□ -2.07
XRN1-202ENST00000392981 TRBV7-4A0A0J9YYF1 115 aa2.12□□□□□ -2.07
XRN1-202ENST00000392981 PRR9Q5T870 116 aa2.12□□□□□ -2.07
XRN1-202ENST00000392981 VPS13BQ7Z7G8 4022 aa2.12□□□□□ -2.07
XRN1-202ENST00000392981 DNAH2Q9P225 4427 aa2.12□□□□□ -2.07
XRN1-202ENST00000392981 MOBPQ13875 183 aa2.12□□□□□ -2.07
XRN1-202ENST00000392981 DEFB4AO15263 64 aa2.12□□□□□ -2.07
XRN1-202ENST00000392981 KRTAP11-1Q8IUC1 163 aa2.11□□□□□ -2.07
XRN1-202ENST00000392981 KMT2CQ8NEZ4 4911 aaKnown RBP2.11□□□□□ -2.07
XRN1-202ENST00000392981 I3L2K1 104 aa2.11□□□□□ -2.07
XRN1-202ENST00000392981 CSPG4Q6UVK1 2322 aa2.11□□□□□ -2.07
XRN1-202ENST00000392981 GPR179Q6PRD1 2367 aa2.11□□□□□ -2.07
XRN1-202ENST00000392981 OBSCN-AS1Q96MR7 158 aa2.11□□□□□ -2.07
XRN1-202ENST00000392981 APCP25054 2843 aa2.11□□□□□ -2.07
XRN1-202ENST00000392981 K7EIM0 57 aa2.11□□□□□ -2.07
XRN1-202ENST00000392981 Q8IZM0 81 aa2.11□□□□□ -2.07
XRN1-202ENST00000392981 KMT2AQ03164 3969 aa2.11□□□□□ -2.07
XRN1-202ENST00000392981 IGIPA6NJ69 53 aa2.1□□□□□ -2.07
XRN1-202ENST00000392981 SHANK1Q9Y566 2161 aa2.1□□□□□ -2.07
XRN1-202ENST00000392981 IGSF10Q6WRI0 2623 aa2.1□□□□□ -2.07
XRN1-202ENST00000392981 DEFB131BA0A096LNP1 70 aa2.1□□□□□ -2.07
XRN1-202ENST00000392981 DNAH10Q8IVF4 4471 aa2.1□□□□□ -2.07
XRN1-202ENST00000392981 LINC00959A0A1B0GUT2 108 aa2.1□□□□□ -2.07
XRN1-202ENST00000392981 M0QY20 66 aa2.1□□□□□ -2.07
XRN1-202ENST00000392981 TENM1Q9UKZ4 2725 aa2.1□□□□□ -2.07
XRN1-202ENST00000392981 C10orf142B7Z368 130 aa2.09□□□□□ -2.07
XRN1-202ENST00000392981 AMELXQ99217 191 aa2.09□□□□□ -2.08
XRN1-202ENST00000392981 CEP192Q8TEP8 1941 aa2.09□□□□□ -2.08
XRN1-202ENST00000392981 C9orf163Q8N9P6 203 aa2.09□□□□□ -2.08
XRN1-202ENST00000392981 PRO3102Q9H379 93 aa2.08□□□□□ -2.08
XRN1-202ENST00000392981 C22orf24Q9Y442 160 aa2.08□□□□□ -2.08
XRN1-202ENST00000392981 RYR3Q15413 4870 aa2.08□□□□□ -2.08
XRN1-202ENST00000392981 LELP1Q5T871 98 aa2.08□□□□□ -2.08
XRN1-202ENST00000392981 HIVEP3Q5T1R4 2406 aa2.08□□□□□ -2.08
XRN1-202ENST00000392981 USF3Q68DE3 2245 aa2.08□□□□□ -2.08
XRN1-202ENST00000392981 CDC42SE2Q9NRR3 84 aa2.08□□□□□ -2.08
XRN1-202ENST00000392981 A8MU10 97 aa2.08□□□□□ -2.08
XRN1-202ENST00000392981 DEFB1P60022 68 aa2.07□□□□□ -2.08
XRN1-202ENST00000392981 CNBPP62633 177 aaKnown RBP2.07□□□□□ -2.08
XRN1-202ENST00000392981 UNQ6190/PRO20217Q6UXQ8 127 aa2.07□□□□□ -2.08
XRN1-202ENST00000392981 IGLV3-1P01715 115 aa2.07□□□□□ -2.08
XRN1-202ENST00000392981 PKHD1P08F94 4074 aa2.07□□□□□ -2.08
XRN1-202ENST00000392981 PRO2289Q9P1D8 64 aa2.07□□□□□ -2.08
XRN1-202ENST00000392981 POLR2KP53803 58 aaKnown RBP2.06□□□□□ -2.08
XRN1-202ENST00000392981 LINC01556Q5JQF7 62 aa2.06□□□□□ -2.08
XRN1-202ENST00000392981 LINC00304Q8N9R0 145 aa2.06□□□□□ -2.08
XRN1-202ENST00000392981 C2CD3Q4AC94 2353 aa2.06□□□□□ -2.08
XRN1-202ENST00000392981 STARD9Q9P2P6 4700 aa2.06□□□□□ -2.08
XRN1-202ENST00000392981 TECTAO75443 2155 aa2.06□□□□□ -2.08
XRN1-202ENST00000392981 CNFNQ9BYD5 112 aa2.06□□□□□ -2.08
XRN1-202ENST00000392981 HUWE1Q7Z6Z7 4374 aaKnown RBP2.06□□□□□ -2.08
XRN1-202ENST00000392981 SPACA4Q8TDM5 124 aa2.05□□□□□ -2.08
XRN1-202ENST00000392981 VPS13DQ5THJ4 4388 aa2.05□□□□□ -2.08
XRN1-202ENST00000392981 GCN1Q92616 2671 aaKnown RBP2.05□□□□□ -2.08
XRN1-202ENST00000392981 M0R2N4 97 aa2.05□□□□□ -2.08
XRN1-202ENST00000392981 A0A0D9SG42 100 aa2.04□□□□□ -2.08
XRN1-202ENST00000392981 SPG11Q96JI7 2443 aa2.04□□□□□ -2.08
XRN1-202ENST00000392981 IGLV5-48A0A075B6I7 105 aa2.04□□□□□ -2.08
XRN1-202ENST00000392981 SPINK7P58062 85 aa2.04□□□□□ -2.08
XRN1-202ENST00000392981 ANAPC11Q9NYG5 84 aa2.04□□□□□ -2.08
XRN1-202ENST00000392981 IGFL1Q6UW32 110 aa2.04□□□□□ -2.08
XRN1-202ENST00000392981 SONP18583 2426 aaKnown RBP2.04□□□□□ -2.08
XRN1-202ENST00000392981 CHD6Q8TD26 2715 aa2.03□□□□□ -2.08
XRN1-202ENST00000392981 CRIP1P50238 77 aa2.03□□□□□ -2.08
XRN1-202ENST00000392981 LOC110117498A0A087WWA1 95 aa2.03□□□□□ -2.08
XRN1-202ENST00000392981 MT3P25713 68 aa2.03□□□□□ -2.08
XRN1-202ENST00000392981 DEFB114Q30KQ6 69 aa2.03□□□□□ -2.08
XRN1-202ENST00000392981 MRPL34Q9BQ48 92 aaKnown RBP2.03□□□□□ -2.08
XRN1-202ENST00000392981 PRR34Q9NV39 138 aa2.03□□□□□ -2.08
XRN1-202ENST00000392981 MYO18BQ8IUG5 2567 aa2.03□□□□□ -2.08
XRN1-202ENST00000392981 MYCBP2O75592 4640 aa2.03□□□□□ -2.08
XRN1-202ENST00000392981 A8MTW9 85 aa2.03□□□□□ -2.09
XRN1-202ENST00000392981 LY6G6CO95867 125 aa2.03□□□□□ -2.09
XRN1-202ENST00000392981 FAT3Q8TDW7 4589 aa2.02□□□□□ -2.09
XRN1-202ENST00000392981 COX6A2Q02221 97 aa2.02□□□□□ -2.09
XRN1-202ENST00000392981 PLAC4Q8WY50 150 aa2.02□□□□□ -2.09
XRN1-202ENST00000392981 ABCA2Q9BZC7 2435 aa2.02□□□□□ -2.09
XRN1-202ENST00000392981 COX6B2Q6YFQ2 88 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms