RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PLAC8Q9NZF1 115 aa7.13□□□□□ -1.27
SMARCAL1-203ENST00000392128 DSCR8Q96T75 97 aa7.12□□□□□ -1.27
SMARCAL1-203ENST00000392128 PDE6GP18545 87 aa7.12□□□□□ -1.27
SMARCAL1-203ENST00000392128 Q6ZQT0 140 aa7.12□□□□□ -1.27
SMARCAL1-203ENST00000392128 DEFB105AQ8NG35 78 aa7.12□□□□□ -1.27
SMARCAL1-203ENST00000392128 ATOX1O00244 68 aa7.11□□□□□ -1.27
SMARCAL1-203ENST00000392128 KRTAP10-2P60368 255 aa7.11□□□□□ -1.27
SMARCAL1-203ENST00000392128 ST20-AS1Q8NBB2 130 aa7.11□□□□□ -1.27
SMARCAL1-203ENST00000392128 TRBV7-4A0A0J9YYF1 115 aa7.11□□□□□ -1.27
SMARCAL1-203ENST00000392128 BCE1O60756 84 aa7.1□□□□□ -1.27
SMARCAL1-203ENST00000392128 HIST1H4AP62805 103 aaKnown RBP7.1□□□□□ -1.27
SMARCAL1-203ENST00000392128 DNAH11Q96DT5 4516 aa7.1□□□□□ -1.27
SMARCAL1-203ENST00000392128 LCE6AA0A183 80 aa7.09□□□□□ -1.27
SMARCAL1-203ENST00000392128 C4orf48Q5BLP8 95 aa7.09□□□□□ -1.27
SMARCAL1-203ENST00000392128 HIGD2AQ9BW72 106 aa7.09□□□□□ -1.27
SMARCAL1-203ENST00000392128 DNAH5Q8TE73 4624 aa7.08□□□□□ -1.28
SMARCAL1-203ENST00000392128 UBE2AP49459 152 aa7.08□□□□□ -1.28
SMARCAL1-203ENST00000392128 KRTAP13-1Q8IUC0 172 aa7.08□□□□□ -1.28
SMARCAL1-203ENST00000392128 FAT2Q9NYQ8 4349 aa7.08□□□□□ -1.28
SMARCAL1-203ENST00000392128 SACSQ9NZJ4 4579 aa7.08□□□□□ -1.28
SMARCAL1-203ENST00000392128 CD164Q04900 197 aa7.08□□□□□ -1.28
SMARCAL1-203ENST00000392128 LINC00846Q9NV44 126 aa7.08□□□□□ -1.28
SMARCAL1-203ENST00000392128 LINC00643Q86TS7 51 aa7.07□□□□□ -1.28
SMARCAL1-203ENST00000392128 CYSTM1Q9H1C7 97 aa7.07□□□□□ -1.28
SMARCAL1-203ENST00000392128 DNAH8Q96JB1 4490 aa7.06□□□□□ -1.28
SMARCAL1-203ENST00000392128 PKD1P98161 4303 aa7.05□□□□□ -1.28
SMARCAL1-203ENST00000392128 SMIM29Q86T20 159 aa7.05□□□□□ -1.28
SMARCAL1-203ENST00000392128 SERP1Q9Y6X1 66 aa7.05□□□□□ -1.28
SMARCAL1-203ENST00000392128 Q6ZSA8 131 aa7.05□□□□□ -1.28
SMARCAL1-203ENST00000392128 PSORS1C2Q9UIG4 136 aa7.05□□□□□ -1.28
SMARCAL1-203ENST00000392128 PMAIP1Q13794 54 aa7.04□□□□□ -1.28
SMARCAL1-203ENST00000392128 SPRR1BP22528 89 aa7.03□□□□□ -1.28
SMARCAL1-203ENST00000392128 SERP2Q8N6R1 65 aa7.03□□□□□ -1.28
SMARCAL1-203ENST00000392128 FAM30AQ9NZY2 134 aa7.03□□□□□ -1.28
SMARCAL1-203ENST00000392128 KRTAP10-1P60331 282 aa7.02□□□□□ -1.28
SMARCAL1-203ENST00000392128 SMIM26A0A096LP01 95 aa7.02□□□□□ -1.29
SMARCAL1-203ENST00000392128 CIRBP-AS1Q8TBR5 109 aa7.02□□□□□ -1.29
SMARCAL1-203ENST00000392128 F8WEM9 126 aa7.01□□□□□ -1.29
SMARCAL1-203ENST00000392128 C1orf137Q5JT78 98 aa7.01□□□□□ -1.29
SMARCAL1-203ENST00000392128 Q6JHZ5 121 aa7.01□□□□□ -1.29
SMARCAL1-203ENST00000392128 UBL5Q9BZL1 73 aa7.01□□□□□ -1.29
SMARCAL1-203ENST00000392128 A0A0U1RQV1 116 aa7□□□□□ -1.29
SMARCAL1-203ENST00000392128 IGLV8-61A0A075B6I0 122 aa7□□□□□ -1.29
SMARCAL1-203ENST00000392128 SCXQ7RTU7 201 aa7□□□□□ -1.29
SMARCAL1-203ENST00000392128 BRK1Q8WUW1 75 aa6.99□□□□□ -1.29
SMARCAL1-203ENST00000392128 ZNF861PO60384 105 aa6.99□□□□□ -1.29
SMARCAL1-203ENST00000392128 A0A1B0GW54 56 aa6.98□□□□□ -1.29
SMARCAL1-203ENST00000392128 SRRM2Q9UQ35 2752 aaKnown RBP6.98□□□□□ -1.29
SMARCAL1-203ENST00000392128 ATP5EP2Q5VTU8 51 aa6.98□□□□□ -1.29
SMARCAL1-203ENST00000392128 A0A1W2PNM2 257 aa6.97□□□□□ -1.29
SMARCAL1-203ENST00000392128 Q6ZVQ6 151 aa6.97□□□□□ -1.29
SMARCAL1-203ENST00000392128 Q8NBF4 154 aa6.97□□□□□ -1.29
SMARCAL1-203ENST00000392128 SPRR4Q96PI1 79 aa6.97□□□□□ -1.29
SMARCAL1-203ENST00000392128 ZNF706Q9Y5V0 76 aaPredicted RBP6.97□□□□□ -1.29
SMARCAL1-203ENST00000392128 IGLV7-43P04211 117 aa6.96□□□□□ -1.3
SMARCAL1-203ENST00000392128 FP248Q71RG6 208 aaPredicted RBP6.96□□□□□ -1.3
SMARCAL1-203ENST00000392128 LINC00483Q53H64 154 aa6.96□□□□□ -1.3
SMARCAL1-203ENST00000392128 IGKV3D-7A0A0C4DH55 119 aa6.95□□□□□ -1.3
SMARCAL1-203ENST00000392128 IGFL1Q6UW32 110 aa6.95□□□□□ -1.3
SMARCAL1-203ENST00000392128 RYR2Q92736 4967 aa6.94□□□□□ -1.3
SMARCAL1-203ENST00000392128 A0A1B0GVY2 172 aa6.93□□□□□ -1.3
SMARCAL1-203ENST00000392128 PRR15Q8IV56 129 aa6.93□□□□□ -1.3
SMARCAL1-203ENST00000392128 HAMPP81172 84 aa6.92□□□□□ -1.3
SMARCAL1-203ENST00000392128 CXCL6P80162 114 aa6.91□□□□□ -1.3
SMARCAL1-203ENST00000392128 NREPQ16612 68 aa6.9□□□□□ -1.3
SMARCAL1-203ENST00000392128 A0A0G2JQZ4 141 aa6.9□□□□□ -1.31
SMARCAL1-203ENST00000392128 KMT2CQ8NEZ4 4911 aaKnown RBP6.9□□□□□ -1.31
SMARCAL1-203ENST00000392128 PKHD1P08F94 4074 aa6.89□□□□□ -1.31
SMARCAL1-203ENST00000392128 RPL37AP61513 92 aaKnown RBP6.89□□□□□ -1.31
SMARCAL1-203ENST00000392128 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
SMARCAL1-203ENST00000392128 IGLV9-49A0A0B4J1Y8 123 aa6.87□□□□□ -1.31
SMARCAL1-203ENST00000392128 A0A087WVE0 104 aa6.85□□□□□ -1.31
SMARCAL1-203ENST00000392128 ANAPC11Q9NYG5 84 aa6.85□□□□□ -1.31
SMARCAL1-203ENST00000392128 DYNC1H1Q14204 4646 aaKnown RBP6.84□□□□□ -1.31
SMARCAL1-203ENST00000392128 A0A087WSZ3 146 aa6.84□□□□□ -1.31
SMARCAL1-203ENST00000392128 H7BZZ5 65 aa6.84□□□□□ -1.31
SMARCAL1-203ENST00000392128 BPY2O14599 106 aa6.84□□□□□ -1.31
SMARCAL1-203ENST00000392128 ATP5EP56381 51 aaPredicted RBP6.84□□□□□ -1.31
SMARCAL1-203ENST00000392128 MOBPQ13875 183 aa6.83□□□□□ -1.32
SMARCAL1-203ENST00000392128 VPS13BQ7Z7G8 4022 aa6.81□□□□□ -1.32
SMARCAL1-203ENST00000392128 IGKV4-1P06312 121 aa6.79□□□□□ -1.32
SMARCAL1-203ENST00000392128 KLKP1Q107X0 134 aa6.79□□□□□ -1.32
SMARCAL1-203ENST00000392128 FAM229BQ4G0N7 80 aa6.79□□□□□ -1.32
SMARCAL1-203ENST00000392128 Q8N9L7 120 aa6.78□□□□□ -1.32
SMARCAL1-203ENST00000392128 APOBP04114 4563 aaKnown RBP6.77□□□□□ -1.33
SMARCAL1-203ENST00000392128 DSCR10P59022 87 aa6.77□□□□□ -1.33
SMARCAL1-203ENST00000392128 SSBP3-AS1Q7Z2R9 100 aa6.77□□□□□ -1.33
SMARCAL1-203ENST00000392128 C20orf197Q8N268 126 aa6.77□□□□□ -1.33
SMARCAL1-203ENST00000392128 RBM12B-AS1Q9P1G2 102 aa6.77□□□□□ -1.33
SMARCAL1-203ENST00000392128 KRTAP1-4P0C5Y4 121 aa6.76□□□□□ -1.33
SMARCAL1-203ENST00000392128 LINC00472Q9H8W2 130 aa6.76□□□□□ -1.33
SMARCAL1-203ENST00000392128 NDUFC1O43677 76 aa6.76□□□□□ -1.33
SMARCAL1-203ENST00000392128 SPINK6Q6UWN8 80 aa6.75□□□□□ -1.33
SMARCAL1-203ENST00000392128 A0A087X002 238 aa6.75□□□□□ -1.33
SMARCAL1-203ENST00000392128 H3BS24 57 aa6.74□□□□□ -1.33
SMARCAL1-203ENST00000392128 SMR3BP02814 79 aaPredicted RBP6.74□□□□□ -1.33
SMARCAL1-203ENST00000392128 RYR3Q15413 4870 aa6.74□□□□□ -1.33
SMARCAL1-203ENST00000392128 DEFB116Q30KQ4 102 aa6.74□□□□□ -1.33
SMARCAL1-203ENST00000392128 KRTAP13-2Q52LG2 175 aa6.74□□□□□ -1.33
SMARCAL1-203ENST00000392128 K7EQZ3 153 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms