RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 PPDPFLQ8WWR9 84 aa7.36□□□□□ -1.23
TRBV4-1-201ENST00000390357 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.34□□□□□ -1.23
TRBV4-1-201ENST00000390357 Q6ZQY7 126 aa7.34□□□□□ -1.23
TRBV4-1-201ENST00000390357 SNCGO76070 127 aa7.33□□□□□ -1.24
TRBV4-1-201ENST00000390357 OCIAD2Q56VL3 154 aa7.33□□□□□ -1.24
TRBV4-1-201ENST00000390357 SCGB1D1O95968 90 aa7.32□□□□□ -1.24
TRBV4-1-201ENST00000390357 HIST1H4GQ99525 98 aa7.32□□□□□ -1.24
TRBV4-1-201ENST00000390357 A0A0G2JQZ4 141 aa7.31□□□□□ -1.24
TRBV4-1-201ENST00000390357 DLEU1O43261 78 aa7.31□□□□□ -1.24
TRBV4-1-201ENST00000390357 RPL37P61927 97 aaKnown RBP7.31□□□□□ -1.24
TRBV4-1-201ENST00000390357 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
TRBV4-1-201ENST00000390357 CLEC2BQ92478 149 aa7.31□□□□□ -1.24
TRBV4-1-201ENST00000390357 KRTAP9-6A0A140TA67 174 aa7.3□□□□□ -1.24
TRBV4-1-201ENST00000390357 COX8AP10176 69 aa7.3□□□□□ -1.24
TRBV4-1-201ENST00000390357 SNHG12Q9BXW3 62 aa7.3□□□□□ -1.24
TRBV4-1-201ENST00000390357 TRBV7-7A0A0K0K1E9 115 aa7.29□□□□□ -1.24
TRBV4-1-201ENST00000390357 CFC1BP0CG36 223 aa7.29□□□□□ -1.24
TRBV4-1-201ENST00000390357 GHRHP01286 108 aa7.28□□□□□ -1.24
TRBV4-1-201ENST00000390357 IGFL1Q6UW32 110 aa7.28□□□□□ -1.24
TRBV4-1-201ENST00000390357 H0YGX0 51 aa7.27□□□□□ -1.25
TRBV4-1-201ENST00000390357 KRTAP19-2Q3LHN2 52 aa7.27□□□□□ -1.25
TRBV4-1-201ENST00000390357 C12orf57Q99622 126 aa7.26□□□□□ -1.25
TRBV4-1-201ENST00000390357 A6NJY4 79 aa7.25□□□□□ -1.25
TRBV4-1-201ENST00000390357 HIGD1BQ9P298 99 aa7.25□□□□□ -1.25
TRBV4-1-201ENST00000390357 MT1HP80294 61 aa7.24□□□□□ -1.25
TRBV4-1-201ENST00000390357 RAB37Q96AX2 223 aa7.24□□□□□ -1.25
TRBV4-1-201ENST00000390357 LST1O00453 97 aa7.23□□□□□ -1.25
TRBV4-1-201ENST00000390357 CFC1P0CG37 223 aa7.23□□□□□ -1.25
TRBV4-1-201ENST00000390357 Q6Q795 121 aa7.23□□□□□ -1.25
TRBV4-1-201ENST00000390357 A0A0B4J2C4 111 aa7.22□□□□□ -1.25
TRBV4-1-201ENST00000390357 ATP11AUNQ6ZP68 121 aa7.22□□□□□ -1.25
TRBV4-1-201ENST00000390357 SS18L2Q9UHA2 77 aa7.22□□□□□ -1.25
TRBV4-1-201ENST00000390357 A0A1B0GX51 115 aa7.21□□□□□ -1.26
TRBV4-1-201ENST00000390357 Q75L30 129 aa7.2□□□□□ -1.26
TRBV4-1-201ENST00000390357 TEN1Q86WV5 123 aa7.2□□□□□ -1.26
TRBV4-1-201ENST00000390357 C14orf144Q96I85 54 aa7.19□□□□□ -1.26
TRBV4-1-201ENST00000390357 TMEM238LA0A1B0GVL6 79 aa7.18□□□□□ -1.26
TRBV4-1-201ENST00000390357 NDUFV3P56181 108 aaKnown RBP7.18□□□□□ -1.26
TRBV4-1-201ENST00000390357 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
TRBV4-1-201ENST00000390357 SPATA45Q537H7 98 aa7.17□□□□□ -1.26
TRBV4-1-201ENST00000390357 H3BQ85 93 aa7.16□□□□□ -1.26
TRBV4-1-201ENST00000390357 H3BUT2 72 aa7.16□□□□□ -1.26
TRBV4-1-201ENST00000390357 CEND1Q8N111 149 aa7.16□□□□□ -1.26
TRBV4-1-201ENST00000390357 OBSCN-AS1Q96MR7 158 aa7.16□□□□□ -1.26
TRBV4-1-201ENST00000390357 VAMP8Q9BV40 100 aa7.16□□□□□ -1.26
TRBV4-1-201ENST00000390357 PRO1854Q9UHT4 67 aa7.16□□□□□ -1.26
TRBV4-1-201ENST00000390357 PAM16Q9Y3D7 125 aa7.16□□□□□ -1.26
TRBV4-1-201ENST00000390357 M0R2T5 61 aa7.15□□□□□ -1.26
TRBV4-1-201ENST00000390357 Q96NJ1 140 aa7.14□□□□□ -1.27
TRBV4-1-201ENST00000390357 H3BMG7 143 aa7.13□□□□□ -1.27
TRBV4-1-201ENST00000390357 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
TRBV4-1-201ENST00000390357 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
TRBV4-1-201ENST00000390357 C2orf91Q6ZV80 131 aa7.12□□□□□ -1.27
TRBV4-1-201ENST00000390357 FAM218AQ96MZ4 157 aa7.12□□□□□ -1.27
TRBV4-1-201ENST00000390357 TMA7Q9Y2S6 64 aaKnown RBP7.12□□□□□ -1.27
TRBV4-1-201ENST00000390357 CRCT1Q9UGL9 99 aa7.11□□□□□ -1.27
TRBV4-1-201ENST00000390357 FABP2P12104 132 aa7.1□□□□□ -1.27
TRBV4-1-201ENST00000390357 C20orf166-AS1Q96NR2 134 aa7.1□□□□□ -1.27
TRBV4-1-201ENST00000390357 A0A087WSZ3 146 aa7.09□□□□□ -1.27
TRBV4-1-201ENST00000390357 DNAL4O96015 105 aa7.08□□□□□ -1.28
TRBV4-1-201ENST00000390357 COX6CP09669 75 aa7.08□□□□□ -1.28
TRBV4-1-201ENST00000390357 A8MUU9 505 aa7.07□□□□□ -1.28
TRBV4-1-201ENST00000390357 TMEM256-PLSCR3K7ERE1 68 aa7.07□□□□□ -1.28
TRBV4-1-201ENST00000390357 TRBV7-4A0A0J9YYF1 115 aa7.06□□□□□ -1.28
TRBV4-1-201ENST00000390357 ANKRD29Q8N6D5 301 aa7.06□□□□□ -1.28
TRBV4-1-201ENST00000390357 ORMDL1Q9P0S3 153 aa7.06□□□□□ -1.28
TRBV4-1-201ENST00000390357 TRBV20-1A0A075B6N2 111 aa7.05□□□□□ -1.28
TRBV4-1-201ENST00000390357 TRIAP1O43715 76 aa7.05□□□□□ -1.28
TRBV4-1-201ENST00000390357 FXYD2P54710 66 aa7.05□□□□□ -1.28
TRBV4-1-201ENST00000390357 A0A1W2PNM2 257 aa7.03□□□□□ -1.28
TRBV4-1-201ENST00000390357 PSMB2P49721 201 aa7.03□□□□□ -1.28
TRBV4-1-201ENST00000390357 LINC00313P59037 77 aa7.03□□□□□ -1.28
TRBV4-1-201ENST00000390357 HSD52Q0P140 79 aa7.03□□□□□ -1.28
TRBV4-1-201ENST00000390357 UBE2V1Q13404 147 aa7.01□□□□□ -1.29
TRBV4-1-201ENST00000390357 PYY3Q5JQD4 70 aa7.01□□□□□ -1.29
TRBV4-1-201ENST00000390357 IGKV4-1P06312 121 aa6.99□□□□□ -1.29
TRBV4-1-201ENST00000390357 FSIP2Q5CZC0 6907 aa6.99□□□□□ -1.29
TRBV4-1-201ENST00000390357 DSCR10P59022 87 aa6.98□□□□□ -1.29
TRBV4-1-201ENST00000390357 SIGMAR1Q99720 223 aa6.98□□□□□ -1.29
TRBV4-1-201ENST00000390357 CCKP06307 115 aa6.97□□□□□ -1.29
TRBV4-1-201ENST00000390357 C21orf62-AS1Q17RA5 79 aa6.97□□□□□ -1.29
TRBV4-1-201ENST00000390357 TRACP01848 142 aa6.96□□□□□ -1.3
TRBV4-1-201ENST00000390357 LINC00472Q9H8W2 130 aa6.96□□□□□ -1.3
TRBV4-1-201ENST00000390357 UQCR10Q9UDW1 63 aa6.96□□□□□ -1.3
TRBV4-1-201ENST00000390357 SCGB1C2P0DMR2 95 aa6.93□□□□□ -1.3
TRBV4-1-201ENST00000390357 RBM3P98179 157 aaKnown RBP6.93□□□□□ -1.3
TRBV4-1-201ENST00000390357 FLGP20930 4061 aaPredicted RBP6.92□□□□□ -1.3
TRBV4-1-201ENST00000390357 KRTAP16-1A8MUX0 517 aa6.92□□□□□ -1.3
TRBV4-1-201ENST00000390357 DSCR8Q96T75 97 aa6.92□□□□□ -1.3
TRBV4-1-201ENST00000390357 C8orf87E5RJ46 101 aa6.91□□□□□ -1.3
TRBV4-1-201ENST00000390357 K7ERJ3 54 aa6.91□□□□□ -1.3
TRBV4-1-201ENST00000390357 RBM12B-AS1Q9P1G2 102 aa6.91□□□□□ -1.3
TRBV4-1-201ENST00000390357 J3KT08 172 aa6.89□□□□□ -1.31
TRBV4-1-201ENST00000390357 SMCPP49901 116 aaPredicted RBP6.89□□□□□ -1.31
TRBV4-1-201ENST00000390357 IGHV6-1A0A0B4J1U7 121 aa6.88□□□□□ -1.31
TRBV4-1-201ENST00000390357 A0A1B0GV72 72 aa6.88□□□□□ -1.31
TRBV4-1-201ENST00000390357 DEFB116Q30KQ4 102 aa6.88□□□□□ -1.31
TRBV4-1-201ENST00000390357 FAM236DA0A1B0GTK5 79 aa6.87□□□□□ -1.31
TRBV4-1-201ENST00000390357 A0A1B0GW54 56 aa6.87□□□□□ -1.31
TRBV4-1-201ENST00000390357 C9JAW5 83 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms