RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 KRTAP4-16G5E9R7 235 aaPredicted RBP8.59□□□□□ -1.03
CCDC57-202ENST00000389641 IGLV1-50A0A075B6I6 118 aa8.59□□□□□ -1.04
CCDC57-202ENST00000389641 CD164Q04900 197 aa8.58□□□□□ -1.04
CCDC57-202ENST00000389641 NDUFB1O75438 58 aa8.58□□□□□ -1.04
CCDC57-202ENST00000389641 Q8N9P0 234 aaPredicted RBP8.57□□□□□ -1.04
CCDC57-202ENST00000389641 MRPL55Q7Z7F7 128 aaKnown RBP8.57□□□□□ -1.04
CCDC57-202ENST00000389641 KRTAP7-1Q8IUC3 87 aa8.57□□□□□ -1.04
CCDC57-202ENST00000389641 A0A1B0GW54 56 aa8.56□□□□□ -1.04
CCDC57-202ENST00000389641 A6NED7 52 aa8.56□□□□□ -1.04
CCDC57-202ENST00000389641 H0Y9P7 68 aa8.56□□□□□ -1.04
CCDC57-202ENST00000389641 UBE2AP49459 152 aa8.56□□□□□ -1.04
CCDC57-202ENST00000389641 CASC10Q5T4H9 136 aa8.56□□□□□ -1.04
CCDC57-202ENST00000389641 IGFL1Q6UW32 110 aa8.56□□□□□ -1.04
CCDC57-202ENST00000389641 CSMD3Q7Z407 3707 aa8.56□□□□□ -1.04
CCDC57-202ENST00000389641 LINC00588Q9Y4M8 146 aa8.54□□□□□ -1.04
CCDC57-202ENST00000389641 LCA10Q71F78 164 aa8.54□□□□□ -1.04
CCDC57-202ENST00000389641 RBM12B-AS1Q9P1G2 102 aa8.54□□□□□ -1.04
CCDC57-202ENST00000389641 MGAM2Q2M2H8 2515 aa8.53□□□□□ -1.04
CCDC57-202ENST00000389641 SPRR1AP35321 89 aa8.52□□□□□ -1.05
CCDC57-202ENST00000389641 PRLHP81277 87 aa8.52□□□□□ -1.05
CCDC57-202ENST00000389641 KTN1-AS1Q86SY8 53 aa8.52□□□□□ -1.05
CCDC57-202ENST00000389641 CASC2Q6XLA1 102 aa8.51□□□□□ -1.05
CCDC57-202ENST00000389641 LIMD2Q9BT23 127 aa8.49□□□□□ -1.05
CCDC57-202ENST00000389641 A0A096LNI7 61 aa8.49□□□□□ -1.05
CCDC57-202ENST00000389641 PCOTHQ58A44 107 aa8.49□□□□□ -1.05
CCDC57-202ENST00000389641 REG3GQ6UW15 175 aa8.48□□□□□ -1.05
CCDC57-202ENST00000389641 KRTAP29-1A8MX34 341 aaPredicted RBP8.47□□□□□ -1.05
CCDC57-202ENST00000389641 COA5Q86WW8 74 aa8.47□□□□□ -1.05
CCDC57-202ENST00000389641 LINC01556Q5JQF7 62 aa8.46□□□□□ -1.06
CCDC57-202ENST00000389641 SPAG11AQ6PDA7 123 aa8.46□□□□□ -1.06
CCDC57-202ENST00000389641 CNBPP62633 177 aaKnown RBP8.46□□□□□ -1.06
CCDC57-202ENST00000389641 IGKV2-24A0A0C4DH68 120 aa8.45□□□□□ -1.06
CCDC57-202ENST00000389641 COL7A1Q02388 2944 aa8.44□□□□□ -1.06
CCDC57-202ENST00000389641 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
CCDC57-202ENST00000389641 TLX1NBP0CAT3 122 aa8.43□□□□□ -1.06
CCDC57-202ENST00000389641 SPANXA2-OT1Q8N9U9 137 aa8.43□□□□□ -1.06
CCDC57-202ENST00000389641 H0Y9J4 135 aa8.43□□□□□ -1.06
CCDC57-202ENST00000389641 DEFB131BA0A096LNP1 70 aa8.43□□□□□ -1.06
CCDC57-202ENST00000389641 TENM2Q9NT68 2774 aa8.42□□□□□ -1.06
CCDC57-202ENST00000389641 ATP11AUNQ6ZP68 121 aa8.41□□□□□ -1.06
CCDC57-202ENST00000389641 IGLV5-37A0A075B6J1 123 aa8.41□□□□□ -1.06
CCDC57-202ENST00000389641 C9orf163Q8N9P6 203 aa8.41□□□□□ -1.06
CCDC57-202ENST00000389641 Q75L30 129 aa8.4□□□□□ -1.06
CCDC57-202ENST00000389641 A6NN06 94 aa8.4□□□□□ -1.07
CCDC57-202ENST00000389641 H3BNG1 76 aa8.39□□□□□ -1.07
CCDC57-202ENST00000389641 LOC101927531A0A1B0GV80 90 aa8.37□□□□□ -1.07
CCDC57-202ENST00000389641 A8MWP4 228 aa8.37□□□□□ -1.07
CCDC57-202ENST00000389641 SPINK7P58062 85 aa8.36□□□□□ -1.07
CCDC57-202ENST00000389641 MOBPQ13875 183 aa8.36□□□□□ -1.07
CCDC57-202ENST00000389641 DNAH10Q8IVF4 4471 aa8.35□□□□□ -1.07
CCDC57-202ENST00000389641 H3BPC8 53 aa8.35□□□□□ -1.07
CCDC57-202ENST00000389641 DNAH10OSP0CZ25 163 aa8.35□□□□□ -1.07
CCDC57-202ENST00000389641 C11orf45Q8TAV5 145 aa8.35□□□□□ -1.07
CCDC57-202ENST00000389641 CDC42SE1Q9NRR8 79 aa8.35□□□□□ -1.07
CCDC57-202ENST00000389641 LINC00472Q9H8W2 130 aa8.34□□□□□ -1.07
CCDC57-202ENST00000389641 STAB2Q8WWQ8 2551 aa8.34□□□□□ -1.07
CCDC57-202ENST00000389641 IGLV7-46A0A075B6I9 117 aa8.34□□□□□ -1.07
CCDC57-202ENST00000389641 NDUFS5O43920 106 aa8.33□□□□□ -1.08
CCDC57-202ENST00000389641 KRTAP11-1Q8IUC1 163 aa8.33□□□□□ -1.08
CCDC57-202ENST00000389641 LYSTQ99698 3801 aa8.32□□□□□ -1.08
CCDC57-202ENST00000389641 KRTAP10-11P60412 298 aa8.32□□□□□ -1.08
CCDC57-202ENST00000389641 KRTAP24-1Q3LI83 254 aa8.32□□□□□ -1.08
CCDC57-202ENST00000389641 IGLV8-61A0A075B6I0 122 aa8.31□□□□□ -1.08
CCDC57-202ENST00000389641 MMP24-AS1A0A0U1RRL7 71 aa8.31□□□□□ -1.08
CCDC57-202ENST00000389641 CMYA5Q8N3K9 4069 aa8.31□□□□□ -1.08
CCDC57-202ENST00000389641 C7orf65Q6ZTY9 151 aa8.3□□□□□ -1.08
CCDC57-202ENST00000389641 PHF5AQ7RTV0 110 aaKnown RBP8.3□□□□□ -1.08
CCDC57-202ENST00000389641 CHTF8P0CG12 524 aa8.29□□□□□ -1.08
CCDC57-202ENST00000389641 PRAC1Q96KF2 57 aa8.29□□□□□ -1.08
CCDC57-202ENST00000389641 LINC01558Q9Y6Z2 57 aa8.26□□□□□ -1.09
CCDC57-202ENST00000389641 DNAH1Q9P2D7 4330 aa8.25□□□□□ -1.09
CCDC57-202ENST00000389641 HRES1P13985 223 aa8.25□□□□□ -1.09
CCDC57-202ENST00000389641 IGLV9-49A0A0B4J1Y8 123 aa8.23□□□□□ -1.09
CCDC57-202ENST00000389641 PRR26Q8N8Z3 221 aa8.23□□□□□ -1.09
CCDC57-202ENST00000389641 IGHV6-1A0A0B4J1U7 121 aa8.22□□□□□ -1.09
CCDC57-202ENST00000389641 ADM2Q7Z4H4 148 aa8.22□□□□□ -1.09
CCDC57-202ENST00000389641 K7EIL1 84 aa8.2□□□□□ -1.1
CCDC57-202ENST00000389641 LINC00313P59037 77 aa8.2□□□□□ -1.1
CCDC57-202ENST00000389641 PLAC8Q9NZF1 115 aa8.2□□□□□ -1.1
CCDC57-202ENST00000389641 C8orf87E5RJ46 101 aa8.17□□□□□ -1.1
CCDC57-202ENST00000389641 C8orf17Q9NRJ1 99 aa8.17□□□□□ -1.1
CCDC57-202ENST00000389641 A0A087X002 238 aa8.17□□□□□ -1.1
CCDC57-202ENST00000389641 NOTCH2NLQ7Z3S9 236 aa8.17□□□□□ -1.1
CCDC57-202ENST00000389641 KRTAP1-5Q9BYS1 174 aa8.16□□□□□ -1.1
CCDC57-202ENST00000389641 Q96NJ1 140 aa8.16□□□□□ -1.1
CCDC57-202ENST00000389641 TP53AIP1Q9HCN2 124 aa8.15□□□□□ -1.1
CCDC57-202ENST00000389641 SPRR1BP22528 89 aa8.15□□□□□ -1.11
CCDC57-202ENST00000389641 DNAH9Q9NYC9 4486 aa8.14□□□□□ -1.11
CCDC57-202ENST00000389641 Q6ZR54 194 aa8.13□□□□□ -1.11
CCDC57-202ENST00000389641 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
CCDC57-202ENST00000389641 ANAPC11Q9NYG5 84 aa8.11□□□□□ -1.11
CCDC57-202ENST00000389641 ASB16-AS1Q495Z4 193 aa8.1□□□□□ -1.11
CCDC57-202ENST00000389641 PANO1I0J062 215 aa8.1□□□□□ -1.11
CCDC57-202ENST00000389641 CDK2AP2O75956 126 aa8.09□□□□□ -1.11
CCDC57-202ENST00000389641 A0A1B0GVX0 72 aa8.08□□□□□ -1.12
CCDC57-202ENST00000389641 MRPL34Q9BQ48 92 aaKnown RBP8.08□□□□□ -1.12
CCDC57-202ENST00000389641 SPINK6Q6UWN8 80 aa8.08□□□□□ -1.12
CCDC57-202ENST00000389641 Q5W150 140 aa8.08□□□□□ -1.12
CCDC57-202ENST00000389641 HUWE1Q7Z6Z7 4374 aaKnown RBP8.07□□□□□ -1.12
CCDC57-202ENST00000389641 DNAH7Q8WXX0 4024 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms