RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 COPS9Q8WXC6 57 aa10.7□□□□□ -0.7
CNEP1R1-201ENST00000389134 FAM236DA0A1B0GTK5 79 aa10.68□□□□□ -0.7
CNEP1R1-201ENST00000389134 LST1O00453 97 aa10.68□□□□□ -0.7
CNEP1R1-201ENST00000389134 FAM236CP0DP71 79 aa10.68□□□□□ -0.7
CNEP1R1-201ENST00000389134 TRAV13-2A0A0B4J235 113 aa10.67□□□□□ -0.7
CNEP1R1-201ENST00000389134 KRTAP19-6Q3LI70 58 aa10.66□□□□□ -0.7
CNEP1R1-201ENST00000389134 TTTY13Q9BZ97 58 aa10.66□□□□□ -0.7
CNEP1R1-201ENST00000389134 IFITM1P13164 125 aa10.65□□□□□ -0.7
CNEP1R1-201ENST00000389134 SLC7A5P1Q8MH63 180 aa10.65□□□□□ -0.7
CNEP1R1-201ENST00000389134 SYS1-DBNDD2H3BUS1 97 aa10.64□□□□□ -0.71
CNEP1R1-201ENST00000389134 OCIAD2Q56VL3 154 aa10.63□□□□□ -0.71
CNEP1R1-201ENST00000389134 SMIM11BQ8TCY0 68 aa10.63□□□□□ -0.71
CNEP1R1-201ENST00000389134 SCGB1D4Q6XE38 83 aa10.62□□□□□ -0.71
CNEP1R1-201ENST00000389134 VAMP3Q15836 100 aa10.6□□□□□ -0.71
CNEP1R1-201ENST00000389134 KRTAP6-3Q3LI67 103 aa10.59□□□□□ -0.71
CNEP1R1-201ENST00000389134 LINC01545Q5VT33 79 aa10.59□□□□□ -0.71
CNEP1R1-201ENST00000389134 Q6ZQY7 126 aa10.59□□□□□ -0.71
CNEP1R1-201ENST00000389134 Q6ZVH6 145 aa10.59□□□□□ -0.71
CNEP1R1-201ENST00000389134 RBM12B-AS1Q9P1G2 102 aa10.59□□□□□ -0.71
CNEP1R1-201ENST00000389134 LINC00575Q6W349 94 aa10.58□□□□□ -0.72
CNEP1R1-201ENST00000389134 MUSTN1Q8IVN3 82 aa10.56□□□□□ -0.72
CNEP1R1-201ENST00000389134 hADV29S1A0JD25 119 aa10.55□□□□□ -0.72
CNEP1R1-201ENST00000389134 SS18L2Q9UHA2 77 aa10.55□□□□□ -0.72
CNEP1R1-201ENST00000389134 MPLKIPQ8TAP9 179 aa10.54□□□□□ -0.72
CNEP1R1-201ENST00000389134 PET117Q6UWS5 81 aa10.53□□□□□ -0.72
CNEP1R1-201ENST00000389134 KRTAP16-1A8MUX0 517 aa10.51□□□□□ -0.73
CNEP1R1-201ENST00000389134 SCGB1D1O95968 90 aa10.5□□□□□ -0.73
CNEP1R1-201ENST00000389134 HRES1P13985 223 aa10.49□□□□□ -0.73
CNEP1R1-201ENST00000389134 PPDPFLQ8WWR9 84 aa10.49□□□□□ -0.73
CNEP1R1-201ENST00000389134 SNHG12Q9BXW3 62 aa10.49□□□□□ -0.73
CNEP1R1-201ENST00000389134 DSCR10P59022 87 aa10.47□□□□□ -0.73
CNEP1R1-201ENST00000389134 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.47□□□□□ -0.73
CNEP1R1-201ENST00000389134 H3BUT2 72 aa10.46□□□□□ -0.73
CNEP1R1-201ENST00000389134 ANKRD39Q53RE8 183 aa10.43□□□□□ -0.74
CNEP1R1-201ENST00000389134 TEN1Q86WV5 123 aa10.42□□□□□ -0.74
CNEP1R1-201ENST00000389134 NOTCH2NLQ7Z3S9 236 aa10.4□□□□□ -0.74
CNEP1R1-201ENST00000389134 C3orf79P0CE67 100 aa10.39□□□□□ -0.75
CNEP1R1-201ENST00000389134 LINC00313P59037 77 aa10.38□□□□□ -0.75
CNEP1R1-201ENST00000389134 MTURNQ8N3F0 131 aa10.38□□□□□ -0.75
CNEP1R1-201ENST00000389134 A0A087WSZ3 146 aa10.37□□□□□ -0.75
CNEP1R1-201ENST00000389134 COLCA2A8K830 154 aa10.37□□□□□ -0.75
CNEP1R1-201ENST00000389134 SIGMAR1Q99720 223 aa10.33□□□□□ -0.76
CNEP1R1-201ENST00000389134 HIST1H2BKO60814 126 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 HIST1H2BJP06899 126 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 HIST1H2BOP23527 126 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 HIST1H2BBP33778 126 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 HIST1H2BDP58876 126 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 KRTDAPP60985 99 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 HIST1H2BCP62807 126 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 HIST2H2BEQ16778 126 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 BVES-AS1Q5T3Y7 98 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 HIST1H2BHQ93079 126 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 HIST1H2BNQ99877 126 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 HIST1H2BMQ99879 126 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 NEBP20929 6669 aa10.32□□□□□ -0.76
CNEP1R1-201ENST00000389134 A8MWP4 228 aa10.3□□□□□ -0.76
CNEP1R1-201ENST00000389134 C12orf57Q99622 126 aa10.29□□□□□ -0.76
CNEP1R1-201ENST00000389134 ATOH7Q8N100 152 aa10.27□□□□□ -0.77
CNEP1R1-201ENST00000389134 NDUFV3P56181 108 aaKnown RBP10.25□□□□□ -0.77
CNEP1R1-201ENST00000389134 KRTAP3-3Q9BYR6 98 aa10.25□□□□□ -0.77
CNEP1R1-201ENST00000389134 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
CNEP1R1-201ENST00000389134 IGKV4-1P06312 121 aa10.24□□□□□ -0.77
CNEP1R1-201ENST00000389134 Q8N9P0 234 aaPredicted RBP10.23□□□□□ -0.77
CNEP1R1-201ENST00000389134 SNCGO76070 127 aa10.21□□□□□ -0.77
CNEP1R1-201ENST00000389134 MUC12Q9UKN1 5478 aa10.19□□□□□ -0.78
CNEP1R1-201ENST00000389134 H3BMG7 143 aa10.19□□□□□ -0.78
CNEP1R1-201ENST00000389134 SNRPEP62304 92 aaKnown RBP10.19□□□□□ -0.78
CNEP1R1-201ENST00000389134 A0A1W2PNM2 257 aa10.16□□□□□ -0.78
CNEP1R1-201ENST00000389134 SPINK7P58062 85 aa10.13□□□□□ -0.79
CNEP1R1-201ENST00000389134 KRTAP20-1Q3LI63 56 aa10.13□□□□□ -0.79
CNEP1R1-201ENST00000389134 COA6Q5JTJ3 125 aaKnown RBP10.13□□□□□ -0.79
CNEP1R1-201ENST00000389134 IGHV6-1A0A0B4J1U7 121 aa10.12□□□□□ -0.79
CNEP1R1-201ENST00000389134 GHRHP01286 108 aa10.12□□□□□ -0.79
CNEP1R1-201ENST00000389134 H0YGX0 51 aa10.1□□□□□ -0.79
CNEP1R1-201ENST00000389134 ZCCHC13Q8WW36 166 aaKnown RBP10.09□□□□□ -0.79
CNEP1R1-201ENST00000389134 TRBV7-4A0A0J9YYF1 115 aa10.08□□□□□ -0.8
CNEP1R1-201ENST00000389134 FABP2P12104 132 aa10.08□□□□□ -0.8
CNEP1R1-201ENST00000389134 DEFB116Q30KQ4 102 aa10.08□□□□□ -0.8
CNEP1R1-201ENST00000389134 LINC00472Q9H8W2 130 aa10.08□□□□□ -0.8
CNEP1R1-201ENST00000389134 FAM218AQ96MZ4 157 aa10.07□□□□□ -0.8
CNEP1R1-201ENST00000389134 C8orf87E5RJ46 101 aa10.04□□□□□ -0.8
CNEP1R1-201ENST00000389134 HIST1H4GQ99525 98 aa10.04□□□□□ -0.8
CNEP1R1-201ENST00000389134 ANKRD29Q8N6D5 301 aa10.03□□□□□ -0.8
CNEP1R1-201ENST00000389134 HSBP1L1C9JCN9 74 aa10.02□□□□□ -0.81
CNEP1R1-201ENST00000389134 RAB37Q96AX2 223 aa10.02□□□□□ -0.81
CNEP1R1-201ENST00000389134 A0A1B0GX51 115 aa10.01□□□□□ -0.81
CNEP1R1-201ENST00000389134 WFDC13Q8IUB5 93 aa10.01□□□□□ -0.81
CNEP1R1-201ENST00000389134 A0A1B0GVX0 72 aa9.99□□□□□ -0.81
CNEP1R1-201ENST00000389134 A6NN06 94 aa9.93□□□□□ -0.82
CNEP1R1-201ENST00000389134 TRACP01848 142 aa9.93□□□□□ -0.82
CNEP1R1-201ENST00000389134 CCKP06307 115 aa9.92□□□□□ -0.82
CNEP1R1-201ENST00000389134 A0A0B4J2C4 111 aa9.9□□□□□ -0.82
CNEP1R1-201ENST00000389134 A0A1B0GV72 72 aa9.89□□□□□ -0.83
CNEP1R1-201ENST00000389134 H3BQ85 93 aa9.87□□□□□ -0.83
CNEP1R1-201ENST00000389134 H1FX-AS1Q4G0G2 97 aa9.86□□□□□ -0.83
CNEP1R1-201ENST00000389134 LYRM7Q5U5X0 104 aa9.85□□□□□ -0.83
CNEP1R1-201ENST00000389134 ORMDL1Q9P0S3 153 aa9.84□□□□□ -0.83
CNEP1R1-201ENST00000389134 COX8AP10176 69 aa9.83□□□□□ -0.84
CNEP1R1-201ENST00000389134 MDN1Q9NU22 5596 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms