RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 VPS25Q9BRG1 176 aa16.84■□□□□ 0.29
TRAPPC10-202ENST00000380221 KRTAP10-4P60372 401 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC10-202ENST00000380221 SRRM2Q9UQ35 2752 aaKnown RBP16.8■□□□□ 0.28
TRAPPC10-202ENST00000380221 GAGE2AQ6NT46 116 aa16.8■□□□□ 0.28
TRAPPC10-202ENST00000380221 FAM240AA0A1B0GVK7 77 aa16.79■□□□□ 0.28
TRAPPC10-202ENST00000380221 FAM229AH3BQW9 127 aa16.79■□□□□ 0.28
TRAPPC10-202ENST00000380221 C3orf22Q8N5N4 141 aa16.77■□□□□ 0.28
TRAPPC10-202ENST00000380221 DSCR8Q96T75 97 aa16.77■□□□□ 0.28
TRAPPC10-202ENST00000380221 KRTAP17-1Q9BYP8 105 aa16.77■□□□□ 0.28
TRAPPC10-202ENST00000380221 CDIP1Q9H305 208 aa16.75■□□□□ 0.27
TRAPPC10-202ENST00000380221 LOC110117498A0A087WWA1 95 aa16.74■□□□□ 0.27
TRAPPC10-202ENST00000380221 CCKP06307 115 aa16.74■□□□□ 0.27
TRAPPC10-202ENST00000380221 Q5VSD8 79 aa16.74■□□□□ 0.27
TRAPPC10-202ENST00000380221 ACYP1P07311 99 aa16.74■□□□□ 0.27
TRAPPC10-202ENST00000380221 PLA2G1BP04054 148 aaKnown RBP16.73■□□□□ 0.27
TRAPPC10-202ENST00000380221 Q6ZQT0 140 aa16.72■□□□□ 0.27
TRAPPC10-202ENST00000380221 BIRC6Q9NR09 4857 aa16.71■□□□□ 0.27
TRAPPC10-202ENST00000380221 TRBV7-4A0A0J9YYF1 115 aa16.71■□□□□ 0.27
TRAPPC10-202ENST00000380221 SMIM29Q86T20 159 aa16.7■□□□□ 0.26
TRAPPC10-202ENST00000380221 SPRR4Q96PI1 79 aa16.69■□□□□ 0.26
TRAPPC10-202ENST00000380221 PDE6GP18545 87 aa16.69■□□□□ 0.26
TRAPPC10-202ENST00000380221 SPINK6Q6UWN8 80 aa16.67■□□□□ 0.26
TRAPPC10-202ENST00000380221 Q8N1X5 172 aa16.67■□□□□ 0.26
TRAPPC10-202ENST00000380221 SPRR1BP22528 89 aa16.66■□□□□ 0.26
TRAPPC10-202ENST00000380221 ZNF706Q9Y5V0 76 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC10-202ENST00000380221 ANAPC11Q9NYG5 84 aa16.63■□□□□ 0.25
TRAPPC10-202ENST00000380221 F8WEM9 126 aa16.62■□□□□ 0.25
TRAPPC10-202ENST00000380221 LINC00483Q53H64 154 aa16.59■□□□□ 0.25
TRAPPC10-202ENST00000380221 LINC00846Q9NV44 126 aa16.59■□□□□ 0.25
TRAPPC10-202ENST00000380221 C21orf62-AS1Q17RA5 79 aa16.56■□□□□ 0.24
TRAPPC10-202ENST00000380221 PKHD1L1Q86WI1 4243 aa16.56■□□□□ 0.24
TRAPPC10-202ENST00000380221 KRTAP1-4P0C5Y4 121 aa16.54■□□□□ 0.24
TRAPPC10-202ENST00000380221 SIGMAR1Q99720 223 aa16.54■□□□□ 0.24
TRAPPC10-202ENST00000380221 IGLV8-61A0A075B6I0 122 aa16.52■□□□□ 0.24
TRAPPC10-202ENST00000380221 MT-ATP8P03928 68 aa16.51■□□□□ 0.23
TRAPPC10-202ENST00000380221 IGFL1Q6UW32 110 aa16.47■□□□□ 0.23
TRAPPC10-202ENST00000380221 IGLV9-49A0A0B4J1Y8 123 aa16.46■□□□□ 0.23
TRAPPC10-202ENST00000380221 A0A1W2PNM2 257 aa16.46■□□□□ 0.23
TRAPPC10-202ENST00000380221 LINC00643Q86TS7 51 aa16.46■□□□□ 0.23
TRAPPC10-202ENST00000380221 A0A087X002 238 aa16.45■□□□□ 0.22
TRAPPC10-202ENST00000380221 A0A0G2JQZ4 141 aa16.44■□□□□ 0.22
TRAPPC10-202ENST00000380221 Q8NBF4 154 aa16.43■□□□□ 0.22
TRAPPC10-202ENST00000380221 KRTAP4-5Q9BYR2 181 aa16.43■□□□□ 0.22
TRAPPC10-202ENST00000380221 UBL5Q9BZL1 73 aa16.43■□□□□ 0.22
TRAPPC10-202ENST00000380221 FAM229BQ4G0N7 80 aa16.42■□□□□ 0.22
TRAPPC10-202ENST00000380221 Q6JHZ5 121 aa16.41■□□□□ 0.22
TRAPPC10-202ENST00000380221 HERC2O95714 4834 aa16.4■□□□□ 0.22
TRAPPC10-202ENST00000380221 C9orf153Q5TBE3 101 aa16.4■□□□□ 0.22
TRAPPC10-202ENST00000380221 CRYGAP11844 174 aa16.38■□□□□ 0.21
TRAPPC10-202ENST00000380221 KRTAP13-2Q52LG2 175 aa16.38■□□□□ 0.21
TRAPPC10-202ENST00000380221 MOBPQ13875 183 aa16.38■□□□□ 0.21
TRAPPC10-202ENST00000380221 A0A1B0GW54 56 aa16.36■□□□□ 0.21
TRAPPC10-202ENST00000380221 Q6ZVQ6 151 aa16.36■□□□□ 0.21
TRAPPC10-202ENST00000380221 PRR26Q8N8Z3 221 aa16.34■□□□□ 0.21
TRAPPC10-202ENST00000380221 IGKV3D-7A0A0C4DH55 119 aa16.29■□□□□ 0.2
TRAPPC10-202ENST00000380221 LRP1Q07954 4544 aaKnown RBP16.29■□□□□ 0.2
TRAPPC10-202ENST00000380221 TRBV7-7A0A0K0K1E9 115 aa16.27■□□□□ 0.2
TRAPPC10-202ENST00000380221 NREPQ16612 68 aa16.27■□□□□ 0.2
TRAPPC10-202ENST00000380221 Q6Q795 121 aa16.26■□□□□ 0.19
TRAPPC10-202ENST00000380221 TYMSOSQ8TAI1 123 aa16.26■□□□□ 0.19
TRAPPC10-202ENST00000380221 ATP5EP2Q5VTU8 51 aa16.25■□□□□ 0.19
TRAPPC10-202ENST00000380221 FAT3Q8TDW7 4589 aa16.24■□□□□ 0.19
TRAPPC10-202ENST00000380221 SSBP3-AS1Q7Z2R9 100 aa16.24■□□□□ 0.19
TRAPPC10-202ENST00000380221 A0A087WSZ3 146 aa16.21■□□□□ 0.19
TRAPPC10-202ENST00000380221 FLG2Q5D862 2391 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC10-202ENST00000380221 IMUPQ9GZP8 106 aa16.21■□□□□ 0.18
TRAPPC10-202ENST00000380221 MYCBP2O75592 4640 aa16.19■□□□□ 0.18
TRAPPC10-202ENST00000380221 ABCA13Q86UQ4 5058 aa16.18■□□□□ 0.18
TRAPPC10-202ENST00000380221 HRCT1Q6UXD1 115 aa16.17■□□□□ 0.18
TRAPPC10-202ENST00000380221 CXCL6P80162 114 aa16.15■□□□□ 0.18
TRAPPC10-202ENST00000380221 SCGB1A1P11684 91 aa16.15■□□□□ 0.18
TRAPPC10-202ENST00000380221 TNXBP22105 4242 aa16.14■□□□□ 0.17
TRAPPC10-202ENST00000380221 KRTAP10-8P60410 259 aa16.11■□□□□ 0.17
TRAPPC10-202ENST00000380221 BPY2O14599 106 aa16.1■□□□□ 0.17
TRAPPC10-202ENST00000380221 HIST1H4AP62805 103 aaKnown RBP16.09■□□□□ 0.17
TRAPPC10-202ENST00000380221 LINC00304Q8N9R0 145 aa16.05■□□□□ 0.16
TRAPPC10-202ENST00000380221 A0A087WVE0 104 aa16.04■□□□□ 0.16
TRAPPC10-202ENST00000380221 OXTP01178 125 aa16.04■□□□□ 0.16
TRAPPC10-202ENST00000380221 CD164Q04900 197 aa16.04■□□□□ 0.16
TRAPPC10-202ENST00000380221 C4orf48Q5BLP8 95 aa16.03■□□□□ 0.16
TRAPPC10-202ENST00000380221 MT1HL1P0DM35 61 aa16.03■□□□□ 0.16
TRAPPC10-202ENST00000380221 DEFB116Q30KQ4 102 aa15.99■□□□□ 0.15
TRAPPC10-202ENST00000380221 FAM236AA0A1B0GUQ0 79 aa15.98■□□□□ 0.15
TRAPPC10-202ENST00000380221 FAM236BA0A1B0GV22 79 aa15.98■□□□□ 0.15
TRAPPC10-202ENST00000380221 SS18L2Q9UHA2 77 aa15.98■□□□□ 0.15
TRAPPC10-202ENST00000380221 Q8N9L7 120 aa15.98■□□□□ 0.15
TRAPPC10-202ENST00000380221 KRTAP29-1A8MX34 341 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC10-202ENST00000380221 SPAG11AQ6PDA7 123 aa15.96■□□□□ 0.15
TRAPPC10-202ENST00000380221 LINC00472Q9H8W2 130 aa15.96■□□□□ 0.15
TRAPPC10-202ENST00000380221 SPINK1P00995 79 aa15.95■□□□□ 0.14
TRAPPC10-202ENST00000380221 DSCR10P59022 87 aa15.95■□□□□ 0.14
TRAPPC10-202ENST00000380221 IGKV4-1P06312 121 aa15.93■□□□□ 0.14
TRAPPC10-202ENST00000380221 PCP4P48539 62 aa15.9■□□□□ 0.14
TRAPPC10-202ENST00000380221 Q96NJ1 140 aa15.89■□□□□ 0.13
TRAPPC10-202ENST00000380221 K7EQZ3 153 aa15.87■□□□□ 0.13
TRAPPC10-202ENST00000380221 RPS29P62273 56 aaKnown RBP15.85■□□□□ 0.13
TRAPPC10-202ENST00000380221 LIMD2Q9BT23 127 aa15.85■□□□□ 0.13
TRAPPC10-202ENST00000380221 J3KT08 172 aa15.84■□□□□ 0.13
TRAPPC10-202ENST00000380221 Q5XG85 94 aa15.83■□□□□ 0.12
TRAPPC10-202ENST00000380221 J3QL48 77 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms