RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 CHTF8P0CG12 524 aa11.35□□□□□ -0.59
TDP2-202ENST00000378198 SPRR1BP22528 89 aa11.35□□□□□ -0.59
TDP2-202ENST00000378198 A0A087WSZ3 146 aa11.34□□□□□ -0.59
TDP2-202ENST00000378198 C9orf163Q8N9P6 203 aa11.34□□□□□ -0.59
TDP2-202ENST00000378198 KRTAP11-1Q8IUC1 163 aa11.33□□□□□ -0.6
TDP2-202ENST00000378198 FP248Q71RG6 208 aaPredicted RBP11.32□□□□□ -0.6
TDP2-202ENST00000378198 LRCOL1A6NCL2 159 aa11.3□□□□□ -0.6
TDP2-202ENST00000378198 DEFB116Q30KQ4 102 aa11.29□□□□□ -0.6
TDP2-202ENST00000378198 ZCCHC13Q8WW36 166 aaKnown RBP11.29□□□□□ -0.6
TDP2-202ENST00000378198 LINC00474Q9P2X8 69 aa11.29□□□□□ -0.6
TDP2-202ENST00000378198 B9D2Q9BPU9 175 aa11.28□□□□□ -0.6
TDP2-202ENST00000378198 DNAH9Q9NYC9 4486 aa11.27□□□□□ -0.61
TDP2-202ENST00000378198 NBDYA0A0U1RRE5 68 aa11.27□□□□□ -0.61
TDP2-202ENST00000378198 DNAH10Q8IVF4 4471 aa11.26□□□□□ -0.61
TDP2-202ENST00000378198 NBEAL1Q6ZS30 2694 aa11.25□□□□□ -0.61
TDP2-202ENST00000378198 WFDC13Q8IUB5 93 aa11.24□□□□□ -0.61
TDP2-202ENST00000378198 COL6A5A8TX70 2615 aa11.22□□□□□ -0.61
TDP2-202ENST00000378198 RPL37AP61513 92 aaKnown RBP11.22□□□□□ -0.61
TDP2-202ENST00000378198 NUPR2A6NF83 97 aa11.21□□□□□ -0.61
TDP2-202ENST00000378198 Q6ZRN7 208 aaPredicted RBP11.21□□□□□ -0.61
TDP2-202ENST00000378198 FAM229BQ4G0N7 80 aa11.21□□□□□ -0.62
TDP2-202ENST00000378198 KRTAP29-1A8MX34 341 aaPredicted RBP11.2□□□□□ -0.62
TDP2-202ENST00000378198 MDFIQ99750 246 aa11.2□□□□□ -0.62
TDP2-202ENST00000378198 LINC00472Q9H8W2 130 aa11.2□□□□□ -0.62
TDP2-202ENST00000378198 KRTAP13-1Q8IUC0 172 aa11.19□□□□□ -0.62
TDP2-202ENST00000378198 PRR15Q8IV56 129 aa11.18□□□□□ -0.62
TDP2-202ENST00000378198 A8MWP4 228 aa11.18□□□□□ -0.62
TDP2-202ENST00000378198 PANO1I0J062 215 aa11.18□□□□□ -0.62
TDP2-202ENST00000378198 MP68P56378 58 aa11.18□□□□□ -0.62
TDP2-202ENST00000378198 DYNC2H1Q8NCM8 4307 aaKnown RBP11.17□□□□□ -0.62
TDP2-202ENST00000378198 CASC2Q6XLA1 102 aa11.16□□□□□ -0.62
TDP2-202ENST00000378198 NDUFB1O75438 58 aa11.16□□□□□ -0.62
TDP2-202ENST00000378198 hDV103S1A0JD37 113 aa11.15□□□□□ -0.62
TDP2-202ENST00000378198 COL7A1Q02388 2944 aa11.15□□□□□ -0.62
TDP2-202ENST00000378198 LYSTQ99698 3801 aa11.15□□□□□ -0.63
TDP2-202ENST00000378198 SPACA4Q8TDM5 124 aa11.13□□□□□ -0.63
TDP2-202ENST00000378198 CYP4F30PQ9H0H9 118 aa11.13□□□□□ -0.63
TDP2-202ENST00000378198 LINC00336Q6ZUF6 198 aa11.12□□□□□ -0.63
TDP2-202ENST00000378198 C1orf64Q8NEQ6 169 aa11.11□□□□□ -0.63
TDP2-202ENST00000378198 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.11□□□□□ -0.63
TDP2-202ENST00000378198 H3BPC8 53 aa11.1□□□□□ -0.63
TDP2-202ENST00000378198 MPLKIPQ8TAP9 179 aa11.1□□□□□ -0.63
TDP2-202ENST00000378198 TRAV22A0A0B4J277 110 aa11.09□□□□□ -0.63
TDP2-202ENST00000378198 LINC00208Q96KT6 92 aa11.09□□□□□ -0.63
TDP2-202ENST00000378198 STAB2Q8WWQ8 2551 aa11.08□□□□□ -0.64
TDP2-202ENST00000378198 H0Y9P7 68 aa11.07□□□□□ -0.64
TDP2-202ENST00000378198 A0A087WTM6 91 aa11.06□□□□□ -0.64
TDP2-202ENST00000378198 PRO0628Q9UI54 55 aa11.06□□□□□ -0.64
TDP2-202ENST00000378198 MGAM2Q2M2H8 2515 aa11.06□□□□□ -0.64
TDP2-202ENST00000378198 LINC00483Q53H64 154 aa11.05□□□□□ -0.64
TDP2-202ENST00000378198 IGLV9-49A0A0B4J1Y8 123 aa11.05□□□□□ -0.64
TDP2-202ENST00000378198 MMP24-AS1A0A0U1RRL7 71 aa11.04□□□□□ -0.64
TDP2-202ENST00000378198 ZNF706Q9Y5V0 76 aaPredicted RBP11.04□□□□□ -0.64
TDP2-202ENST00000378198 DNAH7Q8WXX0 4024 aa11.03□□□□□ -0.64
TDP2-202ENST00000378198 PRR4Q16378 134 aa11.01□□□□□ -0.65
TDP2-202ENST00000378198 Q96NJ1 140 aa11.01□□□□□ -0.65
TDP2-202ENST00000378198 PLECQ15149 4684 aaKnown RBP11.01□□□□□ -0.65
TDP2-202ENST00000378198 SPANXA2-OT1Q8N9U9 137 aa11□□□□□ -0.65
TDP2-202ENST00000378198 CSMD3Q7Z407 3707 aa11□□□□□ -0.65
TDP2-202ENST00000378198 RTL8CO15255 209 aa10.99□□□□□ -0.65
TDP2-202ENST00000378198 Q1T7F1 81 aa10.99□□□□□ -0.65
TDP2-202ENST00000378198 IGLV5-52A0A0A0MRZ9 124 aa10.98□□□□□ -0.65
TDP2-202ENST00000378198 PSORS1C2Q9UIG4 136 aa10.97□□□□□ -0.65
TDP2-202ENST00000378198 SRRM2Q9UQ35 2752 aaKnown RBP10.97□□□□□ -0.65
TDP2-202ENST00000378198 WWC2-AS2Q96NR7 200 aa10.96□□□□□ -0.65
TDP2-202ENST00000378198 MOBPQ13875 183 aa10.96□□□□□ -0.66
TDP2-202ENST00000378198 PLAC8Q9NZF1 115 aa10.96□□□□□ -0.66
TDP2-202ENST00000378198 ASB16-AS1Q495Z4 193 aa10.95□□□□□ -0.66
TDP2-202ENST00000378198 BRK1Q8WUW1 75 aa10.94□□□□□ -0.66
TDP2-202ENST00000378198 ZNF861PO60384 105 aa10.93□□□□□ -0.66
TDP2-202ENST00000378198 Q6ZR54 194 aa10.93□□□□□ -0.66
TDP2-202ENST00000378198 TP53AIP1Q9HCN2 124 aa10.93□□□□□ -0.66
TDP2-202ENST00000378198 C8orf17Q9NRJ1 99 aa10.92□□□□□ -0.66
TDP2-202ENST00000378198 VPS13DQ5THJ4 4388 aa10.9□□□□□ -0.66
TDP2-202ENST00000378198 TENM2Q9NT68 2774 aa10.89□□□□□ -0.67
TDP2-202ENST00000378198 A0A1B0GVX0 72 aa10.89□□□□□ -0.67
TDP2-202ENST00000378198 CDK2AP2O75956 126 aa10.87□□□□□ -0.67
TDP2-202ENST00000378198 V9GYY9 64 aa10.87□□□□□ -0.67
TDP2-202ENST00000378198 IGHV6-1A0A0B4J1U7 121 aa10.85□□□□□ -0.67
TDP2-202ENST00000378198 ANAPC11Q9NYG5 84 aa10.85□□□□□ -0.67
TDP2-202ENST00000378198 STARD9Q9P2P6 4700 aa10.84□□□□□ -0.67
TDP2-202ENST00000378198 IGLV7-46A0A075B6I9 117 aa10.83□□□□□ -0.68
TDP2-202ENST00000378198 C1orf134Q5TEV5 83 aa10.83□□□□□ -0.68
TDP2-202ENST00000378198 MRPL34Q9BQ48 92 aaKnown RBP10.81□□□□□ -0.68
TDP2-202ENST00000378198 IGLV7-43P04211 117 aa10.8□□□□□ -0.68
TDP2-202ENST00000378198 PSPHP1O15172 72 aa10.8□□□□□ -0.68
TDP2-202ENST00000378198 NDUFS5O43920 106 aa10.8□□□□□ -0.68
TDP2-202ENST00000378198 DNAH17Q9UFH2 4485 aa10.78□□□□□ -0.68
TDP2-202ENST00000378198 PCOTHQ58A44 107 aa10.77□□□□□ -0.69
TDP2-202ENST00000378198 C1orf195Q5TG92 126 aa10.75□□□□□ -0.69
TDP2-202ENST00000378198 PRKDCP78527 4128 aaKnown RBP10.74□□□□□ -0.69
TDP2-202ENST00000378198 HECTD4Q9Y4D8 3996 aa10.74□□□□□ -0.69
TDP2-202ENST00000378198 CD164Q04900 197 aa10.73□□□□□ -0.69
TDP2-202ENST00000378198 COA5Q86WW8 74 aa10.73□□□□□ -0.69
TDP2-202ENST00000378198 Q8N9P0 234 aaPredicted RBP10.73□□□□□ -0.69
TDP2-202ENST00000378198 DNAH8Q96JB1 4490 aa10.73□□□□□ -0.69
TDP2-202ENST00000378198 A0A087X002 238 aa10.73□□□□□ -0.69
TDP2-202ENST00000378198 NOTCH2NLQ7Z3S9 236 aa10.73□□□□□ -0.69
TDP2-202ENST00000378198 LIMD2Q9BT23 127 aa10.73□□□□□ -0.69
TDP2-202ENST00000378198 A8MUN3 132 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms