RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 CASC10Q5T4H9 136 aa10.88□□□□□ -0.67
VARS-215ENST00000375663 PRR15Q8IV56 129 aa10.88□□□□□ -0.67
VARS-215ENST00000375663 C1orf134Q5TEV5 83 aa10.87□□□□□ -0.67
VARS-215ENST00000375663 STAB2Q8WWQ8 2551 aa10.85□□□□□ -0.67
VARS-215ENST00000375663 NBDYA0A0U1RRE5 68 aa10.84□□□□□ -0.67
VARS-215ENST00000375663 K7ERS5 55 aa10.83□□□□□ -0.68
VARS-215ENST00000375663 SPINK1P00995 79 aa10.82□□□□□ -0.68
VARS-215ENST00000375663 COA5Q86WW8 74 aa10.82□□□□□ -0.68
VARS-215ENST00000375663 ZANQ9Y493 2812 aa10.81□□□□□ -0.68
VARS-215ENST00000375663 IGKV2D-30A0A075B6S6 120 aa10.8□□□□□ -0.68
VARS-215ENST00000375663 IGKV2-30P06310 120 aa10.8□□□□□ -0.68
VARS-215ENST00000375663 ACYP2P14621 99 aa10.8□□□□□ -0.68
VARS-215ENST00000375663 Q5XG85 94 aa10.78□□□□□ -0.68
VARS-215ENST00000375663 ITPR2Q14571 2701 aa10.78□□□□□ -0.68
VARS-215ENST00000375663 DSCR10P59022 87 aa10.77□□□□□ -0.69
VARS-215ENST00000375663 IGLV5-37A0A075B6J1 123 aa10.76□□□□□ -0.69
VARS-215ENST00000375663 MRPL34Q9BQ48 92 aaKnown RBP10.76□□□□□ -0.69
VARS-215ENST00000375663 CRYBG3Q68DQ2 2970 aa10.76□□□□□ -0.69
VARS-215ENST00000375663 UTP20O75691 2785 aaKnown RBP10.76□□□□□ -0.69
VARS-215ENST00000375663 A0A1B0GU69 56 aa10.76□□□□□ -0.69
VARS-215ENST00000375663 WIPF1O43516 503 aa10.75□□□□□ -0.69
VARS-215ENST00000375663 K7EIL1 84 aa10.75□□□□□ -0.69
VARS-215ENST00000375663 SPRR4Q96PI1 79 aa10.75□□□□□ -0.69
VARS-215ENST00000375663 RTL8CO15255 209 aa10.74□□□□□ -0.69
VARS-215ENST00000375663 CYP4F30PQ9H0H9 118 aa10.74□□□□□ -0.69
VARS-215ENST00000375663 FLG2Q5D862 2391 aaPredicted RBP10.74□□□□□ -0.69
VARS-215ENST00000375663 C8orf17Q9NRJ1 99 aa10.74□□□□□ -0.69
VARS-215ENST00000375663 CELSR1Q9NYQ6 3014 aa10.73□□□□□ -0.69
VARS-215ENST00000375663 LOC101927531A0A1B0GV80 90 aa10.72□□□□□ -0.69
VARS-215ENST00000375663 C9orf163Q8N9P6 203 aa10.72□□□□□ -0.69
VARS-215ENST00000375663 OXTP01178 125 aa10.72□□□□□ -0.69
VARS-215ENST00000375663 SPACA4Q8TDM5 124 aa10.71□□□□□ -0.69
VARS-215ENST00000375663 FP248Q71RG6 208 aaPredicted RBP10.7□□□□□ -0.7
VARS-215ENST00000375663 CELSR2Q9HCU4 2923 aa10.7□□□□□ -0.7
VARS-215ENST00000375663 LINC00313P59037 77 aa10.69□□□□□ -0.7
VARS-215ENST00000375663 CNBPP62633 177 aaKnown RBP10.67□□□□□ -0.7
VARS-215ENST00000375663 A0A1B0GVX0 72 aa10.67□□□□□ -0.7
VARS-215ENST00000375663 C7orf65Q6ZTY9 151 aa10.66□□□□□ -0.7
VARS-215ENST00000375663 SPANXA2-OT1Q8N9U9 137 aa10.66□□□□□ -0.7
VARS-215ENST00000375663 DMBT1Q9UGM3 2413 aaPredicted RBP10.66□□□□□ -0.7
VARS-215ENST00000375663 BSNQ9UPA5 3926 aa10.65□□□□□ -0.7
VARS-215ENST00000375663 FAM229BQ4G0N7 80 aa10.64□□□□□ -0.71
VARS-215ENST00000375663 HIVEP1P15822 2718 aa10.63□□□□□ -0.71
VARS-215ENST00000375663 SPRR1AP35321 89 aa10.62□□□□□ -0.71
VARS-215ENST00000375663 ANAPC11Q9NYG5 84 aa10.62□□□□□ -0.71
VARS-215ENST00000375663 FAM229AH3BQW9 127 aa10.62□□□□□ -0.71
VARS-215ENST00000375663 Q1T7F1 81 aa10.61□□□□□ -0.71
VARS-215ENST00000375663 C8orf87E5RJ46 101 aa10.6□□□□□ -0.71
VARS-215ENST00000375663 ZNF861PO60384 105 aa10.6□□□□□ -0.71
VARS-215ENST00000375663 ATP11AUNQ6ZP68 121 aa10.6□□□□□ -0.71
VARS-215ENST00000375663 KRTAP26-1Q6PEX3 210 aa10.59□□□□□ -0.71
VARS-215ENST00000375663 NF1P21359 2839 aa10.58□□□□□ -0.72
VARS-215ENST00000375663 FBN2P35556 2912 aa10.55□□□□□ -0.72
VARS-215ENST00000375663 IGLV8-61A0A075B6I0 122 aa10.55□□□□□ -0.72
VARS-215ENST00000375663 KMT2BQ9UMN6 2715 aaPredicted RBP10.55□□□□□ -0.72
VARS-215ENST00000375663 A0A087WTM6 91 aa10.54□□□□□ -0.72
VARS-215ENST00000375663 PSORS1C2Q9UIG4 136 aa10.54□□□□□ -0.72
VARS-215ENST00000375663 APLNQ9ULZ1 77 aa10.52□□□□□ -0.72
VARS-215ENST00000375663 MXRA5Q9NR99 2828 aa10.51□□□□□ -0.73
VARS-215ENST00000375663 SSBP3-AS1Q7Z2R9 100 aa10.51□□□□□ -0.73
VARS-215ENST00000375663 TENM4Q6N022 2769 aa10.49□□□□□ -0.73
VARS-215ENST00000375663 TYMSOSQ8TAI1 123 aa10.49□□□□□ -0.73
VARS-215ENST00000375663 APCP25054 2843 aa10.49□□□□□ -0.73
VARS-215ENST00000375663 NIPBLQ6KC79 2804 aaeCLIP10.48□□□□□ -0.73
VARS-215ENST00000375663 Q96NJ1 140 aa10.47□□□□□ -0.73
VARS-215ENST00000375663 CUBNO60494 3623 aa10.47□□□□□ -0.73
VARS-215ENST00000375663 CD164Q04900 197 aa10.47□□□□□ -0.73
VARS-215ENST00000375663 UQCR11O14957 56 aa10.47□□□□□ -0.73
VARS-215ENST00000375663 KTN1-AS1Q86SY8 53 aa10.46□□□□□ -0.73
VARS-215ENST00000375663 IGLV7-46A0A075B6I9 117 aa10.45□□□□□ -0.74
VARS-215ENST00000375663 TNP2Q05952 138 aa10.45□□□□□ -0.74
VARS-215ENST00000375663 PRR26Q8N8Z3 221 aa10.45□□□□□ -0.74
VARS-215ENST00000375663 Q8N9P0 234 aaPredicted RBP10.43□□□□□ -0.74
VARS-215ENST00000375663 MMP24-AS1A0A0U1RRL7 71 aa10.43□□□□□ -0.74
VARS-215ENST00000375663 IGLV7-43P04211 117 aa10.42□□□□□ -0.74
VARS-215ENST00000375663 CDC42SE1Q9NRR8 79 aa10.42□□□□□ -0.74
VARS-215ENST00000375663 PLA2G1BP04054 148 aaKnown RBP10.41□□□□□ -0.74
VARS-215ENST00000375663 WWC2-AS2Q96NR7 200 aa10.41□□□□□ -0.74
VARS-215ENST00000375663 LINC00472Q9H8W2 130 aa10.4□□□□□ -0.74
VARS-215ENST00000375663 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.39□□□□□ -0.75
VARS-215ENST00000375663 KRTAP4-16G5E9R7 235 aaPredicted RBP10.39□□□□□ -0.75
VARS-215ENST00000375663 MIR22HGQ0VDD5 57 aa10.38□□□□□ -0.75
VARS-215ENST00000375663 SPRR1BP22528 89 aa10.37□□□□□ -0.75
VARS-215ENST00000375663 SMR3BP02814 79 aaPredicted RBP10.35□□□□□ -0.75
VARS-215ENST00000375663 KRTAP1-5Q9BYS1 174 aa10.35□□□□□ -0.75
VARS-215ENST00000375663 Q75L30 129 aa10.33□□□□□ -0.76
VARS-215ENST00000375663 Q5VV11 94 aa10.32□□□□□ -0.76
VARS-215ENST00000375663 CSMD2Q7Z408 3487 aa10.3□□□□□ -0.76
VARS-215ENST00000375663 LCA10Q71F78 164 aa10.28□□□□□ -0.76
VARS-215ENST00000375663 LINC01558Q9Y6Z2 57 aa10.27□□□□□ -0.76
VARS-215ENST00000375663 ZCCHC13Q8WW36 166 aaKnown RBP10.27□□□□□ -0.77
VARS-215ENST00000375663 VPS13CQ709C8 3753 aa10.26□□□□□ -0.77
VARS-215ENST00000375663 HRES1P13985 223 aa10.24□□□□□ -0.77
VARS-215ENST00000375663 KRTAP29-1A8MX34 341 aaPredicted RBP10.23□□□□□ -0.77
VARS-215ENST00000375663 LINC00304Q8N9R0 145 aa10.22□□□□□ -0.77
VARS-215ENST00000375663 ZFHX3Q15911 3703 aa10.22□□□□□ -0.77
VARS-215ENST00000375663 Q8N1X5 172 aa10.2□□□□□ -0.78
VARS-215ENST00000375663 TENM3Q9P273 2699 aa10.19□□□□□ -0.78
VARS-215ENST00000375663 C9orf92A6NGG3 77 aa10.16□□□□□ -0.78
VARS-215ENST00000375663 PLAC8Q9NZF1 115 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms