RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 DEFB105AQ8NG35 78 aa10.35□□□□□ -0.75
HLA-DMA-201ENST00000374843 GAGE2AQ6NT46 116 aa10.34□□□□□ -0.75
HLA-DMA-201ENST00000374843 SMIM29Q86T20 159 aa10.34□□□□□ -0.75
HLA-DMA-201ENST00000374843 Q8N1X5 172 aa10.34□□□□□ -0.75
HLA-DMA-201ENST00000374843 KRTAP17-1Q9BYP8 105 aa10.33□□□□□ -0.76
HLA-DMA-201ENST00000374843 HERC2O95714 4834 aa10.31□□□□□ -0.76
HLA-DMA-201ENST00000374843 NDUFV3P56181 108 aaKnown RBP10.31□□□□□ -0.76
HLA-DMA-201ENST00000374843 OBSCN-AS1Q96MR7 158 aa10.31□□□□□ -0.76
HLA-DMA-201ENST00000374843 KRTAP1-4P0C5Y4 121 aa10.3□□□□□ -0.76
HLA-DMA-201ENST00000374843 FAM229BQ4G0N7 80 aa10.29□□□□□ -0.76
HLA-DMA-201ENST00000374843 TEN1Q86WV5 123 aa10.29□□□□□ -0.76
HLA-DMA-201ENST00000374843 C3orf22Q8N5N4 141 aa10.28□□□□□ -0.76
HLA-DMA-201ENST00000374843 IGLV8-61A0A075B6I0 122 aa10.27□□□□□ -0.77
HLA-DMA-201ENST00000374843 LAMTOR3Q9UHA4 124 aa10.27□□□□□ -0.77
HLA-DMA-201ENST00000374843 JMJD7-PLA2G4BH0Y9G9 81 aa10.26□□□□□ -0.77
HLA-DMA-201ENST00000374843 ETDBQ3ZM63 59 aa10.26□□□□□ -0.77
HLA-DMA-201ENST00000374843 F8WEM9 126 aa10.24□□□□□ -0.77
HLA-DMA-201ENST00000374843 ANAPC11Q9NYG5 84 aa10.23□□□□□ -0.77
HLA-DMA-201ENST00000374843 TRBV7-4A0A0J9YYF1 115 aa10.21□□□□□ -0.77
HLA-DMA-201ENST00000374843 RBM3P98179 157 aaKnown RBP10.21□□□□□ -0.77
HLA-DMA-201ENST00000374843 LOC110117498A0A087WWA1 95 aa10.2□□□□□ -0.78
HLA-DMA-201ENST00000374843 A0A087X002 238 aa10.2□□□□□ -0.78
HLA-DMA-201ENST00000374843 Q8NBF4 154 aa10.2□□□□□ -0.78
HLA-DMA-201ENST00000374843 A0A1B0GV72 72 aa10.19□□□□□ -0.78
HLA-DMA-201ENST00000374843 CRYGAP11844 174 aa10.18□□□□□ -0.78
HLA-DMA-201ENST00000374843 KRTAP13-2Q52LG2 175 aa10.18□□□□□ -0.78
HLA-DMA-201ENST00000374843 Q6JHZ5 121 aa10.18□□□□□ -0.78
HLA-DMA-201ENST00000374843 C14orf132Q9NPU4 83 aa10.18□□□□□ -0.78
HLA-DMA-201ENST00000374843 FAT3Q8TDW7 4589 aa10.17□□□□□ -0.78
HLA-DMA-201ENST00000374843 IGLV9-49A0A0B4J1Y8 123 aa10.17□□□□□ -0.78
HLA-DMA-201ENST00000374843 MOBPQ13875 183 aa10.17□□□□□ -0.78
HLA-DMA-201ENST00000374843 DSCR8Q96T75 97 aa10.17□□□□□ -0.78
HLA-DMA-201ENST00000374843 PDE6GP18545 87 aa10.16□□□□□ -0.78
HLA-DMA-201ENST00000374843 C21orf62-AS1Q17RA5 79 aa10.16□□□□□ -0.78
HLA-DMA-201ENST00000374843 C9orf153Q5TBE3 101 aa10.16□□□□□ -0.78
HLA-DMA-201ENST00000374843 IGFL1Q6UW32 110 aa10.15□□□□□ -0.78
HLA-DMA-201ENST00000374843 Q6ZQT0 140 aa10.15□□□□□ -0.78
HLA-DMA-201ENST00000374843 SSBP3-AS1Q7Z2R9 100 aa10.13□□□□□ -0.79
HLA-DMA-201ENST00000374843 KRTAP4-5Q9BYR2 181 aa10.11□□□□□ -0.79
HLA-DMA-201ENST00000374843 CCKP06307 115 aa10.1□□□□□ -0.79
HLA-DMA-201ENST00000374843 PRR26Q8N8Z3 221 aa10.1□□□□□ -0.79
HLA-DMA-201ENST00000374843 LRP1Q07954 4544 aaKnown RBP10.1□□□□□ -0.79
HLA-DMA-201ENST00000374843 A0A1W2PNM2 257 aa10.09□□□□□ -0.79
HLA-DMA-201ENST00000374843 Q6Q795 121 aa10.09□□□□□ -0.79
HLA-DMA-201ENST00000374843 ABCA13Q86UQ4 5058 aa10.09□□□□□ -0.79
HLA-DMA-201ENST00000374843 MYCBP2O75592 4640 aa10.07□□□□□ -0.8
HLA-DMA-201ENST00000374843 A0A0G2JQZ4 141 aa10.07□□□□□ -0.8
HLA-DMA-201ENST00000374843 TYMSOSQ8TAI1 123 aa10.07□□□□□ -0.8
HLA-DMA-201ENST00000374843 TNXBP22105 4242 aa10.06□□□□□ -0.8
HLA-DMA-201ENST00000374843 CD164Q04900 197 aa10.06□□□□□ -0.8
HLA-DMA-201ENST00000374843 FAM240AA0A1B0GVK7 77 aa10.05□□□□□ -0.8
HLA-DMA-201ENST00000374843 A0A1B0GW54 56 aa10.05□□□□□ -0.8
HLA-DMA-201ENST00000374843 J3QR89 54 aa10.03□□□□□ -0.8
HLA-DMA-201ENST00000374843 KRTAP10-8P60410 259 aa10.02□□□□□ -0.81
HLA-DMA-201ENST00000374843 TRBV7-7A0A0K0K1E9 115 aa10.01□□□□□ -0.81
HLA-DMA-201ENST00000374843 VPS25Q9BRG1 176 aa10.01□□□□□ -0.81
HLA-DMA-201ENST00000374843 OXTP01178 125 aa10□□□□□ -0.81
HLA-DMA-201ENST00000374843 K7ERU9 68 aa9.99□□□□□ -0.81
HLA-DMA-201ENST00000374843 ACYP1P07311 99 aa9.99□□□□□ -0.81
HLA-DMA-201ENST00000374843 FLG2Q5D862 2391 aaPredicted RBP9.99□□□□□ -0.81
HLA-DMA-201ENST00000374843 LINC00304Q8N9R0 145 aa9.98□□□□□ -0.81
HLA-DMA-201ENST00000374843 MT1HL1P0DM35 61 aa9.97□□□□□ -0.81
HLA-DMA-201ENST00000374843 SPAG11AQ6PDA7 123 aa9.97□□□□□ -0.81
HLA-DMA-201ENST00000374843 RPS29P62273 56 aaKnown RBP9.96□□□□□ -0.82
HLA-DMA-201ENST00000374843 A0A087WSZ3 146 aa9.95□□□□□ -0.82
HLA-DMA-201ENST00000374843 Q5XG85 94 aa9.95□□□□□ -0.82
HLA-DMA-201ENST00000374843 KRTAP29-1A8MX34 341 aaPredicted RBP9.94□□□□□ -0.82
HLA-DMA-201ENST00000374843 SPINK1P00995 79 aa9.94□□□□□ -0.82
HLA-DMA-201ENST00000374843 HRCT1Q6UXD1 115 aa9.94□□□□□ -0.82
HLA-DMA-201ENST00000374843 LINC00846Q9NV44 126 aa9.94□□□□□ -0.82
HLA-DMA-201ENST00000374843 C4orf48Q5BLP8 95 aa9.92□□□□□ -0.82
HLA-DMA-201ENST00000374843 SS18L2Q9UHA2 77 aa9.92□□□□□ -0.82
HLA-DMA-201ENST00000374843 ASB16-AS1Q495Z4 193 aa9.9□□□□□ -0.82
HLA-DMA-201ENST00000374843 LIMD2Q9BT23 127 aa9.9□□□□□ -0.82
HLA-DMA-201ENST00000374843 Q6ZVQ6 151 aa9.87□□□□□ -0.83
HLA-DMA-201ENST00000374843 UBL5Q9BZL1 73 aa9.87□□□□□ -0.83
HLA-DMA-201ENST00000374843 CDIP1Q9H305 208 aa9.86□□□□□ -0.83
HLA-DMA-201ENST00000374843 NREPQ16612 68 aa9.84□□□□□ -0.83
HLA-DMA-201ENST00000374843 LINC00472Q9H8W2 130 aa9.84□□□□□ -0.83
HLA-DMA-201ENST00000374843 PCLOQ9Y6V0 5065 aa9.83□□□□□ -0.84
HLA-DMA-201ENST00000374843 Q96NJ1 140 aa9.83□□□□□ -0.84
HLA-DMA-201ENST00000374843 LINC00643Q86TS7 51 aa9.8□□□□□ -0.84
HLA-DMA-201ENST00000374843 ATP5EP2Q5VTU8 51 aa9.79□□□□□ -0.84
HLA-DMA-201ENST00000374843 C1orf195Q5TG92 126 aa9.78□□□□□ -0.84
HLA-DMA-201ENST00000374843 J3KT08 172 aa9.76□□□□□ -0.85
HLA-DMA-201ENST00000374843 CXCL6P80162 114 aa9.76□□□□□ -0.85
HLA-DMA-201ENST00000374843 BPY2O14599 106 aa9.74□□□□□ -0.85
HLA-DMA-201ENST00000374843 SIGMAR1Q99720 223 aa9.74□□□□□ -0.85
HLA-DMA-201ENST00000374843 J3QL48 77 aa9.73□□□□□ -0.85
HLA-DMA-201ENST00000374843 IGKV4-1P06312 121 aa9.71□□□□□ -0.86
HLA-DMA-201ENST00000374843 DSCR10P59022 87 aa9.71□□□□□ -0.86
HLA-DMA-201ENST00000374843 DEFB116Q30KQ4 102 aa9.71□□□□□ -0.86
HLA-DMA-201ENST00000374843 DMBT1Q9UGM3 2413 aaPredicted RBP9.71□□□□□ -0.86
HLA-DMA-201ENST00000374843 A8MWP4 228 aa9.69□□□□□ -0.86
HLA-DMA-201ENST00000374843 IGKV3D-7A0A0C4DH55 119 aa9.68□□□□□ -0.86
HLA-DMA-201ENST00000374843 FP248Q71RG6 208 aaPredicted RBP9.66□□□□□ -0.86
HLA-DMA-201ENST00000374843 MT-ATP8P03928 68 aa9.65□□□□□ -0.86
HLA-DMA-201ENST00000374843 RETNLBQ9BQ08 111 aa9.65□□□□□ -0.86
HLA-DMA-201ENST00000374843 A0A1B0GVX0 72 aa9.63□□□□□ -0.87
HLA-DMA-201ENST00000374843 K7EQZ3 153 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms