RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 PRLHP81277 87 aa11.63□□□□□ -0.55
RXRB-202ENST00000374685 PLA2G2DQ9UNK4 145 aa11.63□□□□□ -0.55
RXRB-202ENST00000374685 C3orf84H3BNL1 204 aa11.63□□□□□ -0.55
RXRB-202ENST00000374685 REG3GQ6UW15 175 aa11.61□□□□□ -0.55
RXRB-202ENST00000374685 OCR1Q9BZK8 76 aa11.61□□□□□ -0.55
RXRB-202ENST00000374685 C16orf90A8MZG2 172 aa11.6□□□□□ -0.55
RXRB-202ENST00000374685 KRTAP4-16G5E9R7 235 aaPredicted RBP11.59□□□□□ -0.55
RXRB-202ENST00000374685 PHF5AQ7RTV0 110 aaKnown RBP11.59□□□□□ -0.55
RXRB-202ENST00000374685 HIGD2AQ9BW72 106 aa11.59□□□□□ -0.55
RXRB-202ENST00000374685 IGLV5-37A0A075B6J1 123 aa11.59□□□□□ -0.55
RXRB-202ENST00000374685 DHRS4-AS1Q9P1J3 65 aa11.59□□□□□ -0.55
RXRB-202ENST00000374685 CNBPP62633 177 aaKnown RBP11.57□□□□□ -0.56
RXRB-202ENST00000374685 DYNC2H1Q8NCM8 4307 aaKnown RBP11.57□□□□□ -0.56
RXRB-202ENST00000374685 A0A0G2JQZ4 141 aa11.57□□□□□ -0.56
RXRB-202ENST00000374685 SPRR1AP35321 89 aa11.56□□□□□ -0.56
RXRB-202ENST00000374685 Q1T7F1 81 aa11.55□□□□□ -0.56
RXRB-202ENST00000374685 hDV103S1A0JD37 113 aa11.55□□□□□ -0.56
RXRB-202ENST00000374685 KMT2AQ03164 3969 aa11.55□□□□□ -0.56
RXRB-202ENST00000374685 KRTAP11-1Q8IUC1 163 aa11.55□□□□□ -0.56
RXRB-202ENST00000374685 LRCOL1A6NCL2 159 aa11.54□□□□□ -0.56
RXRB-202ENST00000374685 PANO1I0J062 215 aa11.54□□□□□ -0.56
RXRB-202ENST00000374685 C14orf177Q52M58 125 aa11.54□□□□□ -0.56
RXRB-202ENST00000374685 IGKV4-1P06312 121 aa11.53□□□□□ -0.56
RXRB-202ENST00000374685 Q8N9L7 120 aa11.53□□□□□ -0.56
RXRB-202ENST00000374685 FBN3Q75N90 2809 aa11.53□□□□□ -0.56
RXRB-202ENST00000374685 C1orf137Q5JT78 98 aa11.49□□□□□ -0.57
RXRB-202ENST00000374685 C9orf163Q8N9P6 203 aa11.49□□□□□ -0.57
RXRB-202ENST00000374685 Q6ZRN7 208 aaPredicted RBP11.48□□□□□ -0.57
RXRB-202ENST00000374685 VPS13DQ5THJ4 4388 aa11.47□□□□□ -0.57
RXRB-202ENST00000374685 CD164Q04900 197 aa11.46□□□□□ -0.58
RXRB-202ENST00000374685 LCE6AA0A183 80 aa11.44□□□□□ -0.58
RXRB-202ENST00000374685 A0A1W2PNM2 257 aa11.44□□□□□ -0.58
RXRB-202ENST00000374685 IGLV5-48A0A075B6I7 105 aa11.43□□□□□ -0.58
RXRB-202ENST00000374685 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.43□□□□□ -0.58
RXRB-202ENST00000374685 C1orf64Q8NEQ6 169 aa11.43□□□□□ -0.58
RXRB-202ENST00000374685 LY6G6CO95867 125 aa11.42□□□□□ -0.58
RXRB-202ENST00000374685 UBE2AP49459 152 aa11.42□□□□□ -0.58
RXRB-202ENST00000374685 DNAH2Q9P225 4427 aa11.42□□□□□ -0.58
RXRB-202ENST00000374685 A0A087WTM6 91 aa11.4□□□□□ -0.58
RXRB-202ENST00000374685 LINC00476Q8WZB0 136 aa11.4□□□□□ -0.58
RXRB-202ENST00000374685 SMIM29Q86T20 159 aa11.39□□□□□ -0.59
RXRB-202ENST00000374685 TRAV22A0A0B4J277 110 aa11.38□□□□□ -0.59
RXRB-202ENST00000374685 TNP2Q05952 138 aa11.38□□□□□ -0.59
RXRB-202ENST00000374685 ZCCHC13Q8WW36 166 aaKnown RBP11.37□□□□□ -0.59
RXRB-202ENST00000374685 DEFB116Q30KQ4 102 aa11.37□□□□□ -0.59
RXRB-202ENST00000374685 PSPHP1O15172 72 aa11.36□□□□□ -0.59
RXRB-202ENST00000374685 Q8NBF4 154 aa11.35□□□□□ -0.59
RXRB-202ENST00000374685 RTL8CO15255 209 aa11.35□□□□□ -0.59
RXRB-202ENST00000374685 CYP4F30PQ9H0H9 118 aa11.34□□□□□ -0.59
RXRB-202ENST00000374685 IGFL1Q6UW32 110 aa11.33□□□□□ -0.6
RXRB-202ENST00000374685 FAM30AQ9NZY2 134 aa11.33□□□□□ -0.6
RXRB-202ENST00000374685 HECTD4Q9Y4D8 3996 aa11.3□□□□□ -0.6
RXRB-202ENST00000374685 SPACA4Q8TDM5 124 aa11.3□□□□□ -0.6
RXRB-202ENST00000374685 C1orf134Q5TEV5 83 aa11.29□□□□□ -0.6
RXRB-202ENST00000374685 A0A087WSZ3 146 aa11.29□□□□□ -0.6
RXRB-202ENST00000374685 Q6ZR54 194 aa11.28□□□□□ -0.6
RXRB-202ENST00000374685 IGLV5-52A0A0A0MRZ9 124 aa11.27□□□□□ -0.6
RXRB-202ENST00000374685 FRAS1Q86XX4 4008 aa11.27□□□□□ -0.61
RXRB-202ENST00000374685 A8MUN3 132 aa11.26□□□□□ -0.61
RXRB-202ENST00000374685 IGLV9-49A0A0B4J1Y8 123 aa11.24□□□□□ -0.61
RXRB-202ENST00000374685 Q5VV11 94 aa11.23□□□□□ -0.61
RXRB-202ENST00000374685 SPRR4Q96PI1 79 aa11.23□□□□□ -0.61
RXRB-202ENST00000374685 A0A1B0GW54 56 aa11.22□□□□□ -0.61
RXRB-202ENST00000374685 KTN1-AS1Q86SY8 53 aa11.22□□□□□ -0.61
RXRB-202ENST00000374685 ANAPC11Q9NYG5 84 aa11.22□□□□□ -0.61
RXRB-202ENST00000374685 A8MU10 97 aa11.21□□□□□ -0.61
RXRB-202ENST00000374685 K7EQZ3 153 aa11.21□□□□□ -0.61
RXRB-202ENST00000374685 DNAH6Q9C0G6 4158 aa11.21□□□□□ -0.62
RXRB-202ENST00000374685 PSORS1C2Q9UIG4 136 aa11.2□□□□□ -0.62
RXRB-202ENST00000374685 DNAH17Q9UFH2 4485 aa11.19□□□□□ -0.62
RXRB-202ENST00000374685 RPL37AP61513 92 aaKnown RBP11.19□□□□□ -0.62
RXRB-202ENST00000374685 DSCR10P59022 87 aa11.18□□□□□ -0.62
RXRB-202ENST00000374685 RBM12B-AS1Q9P1G2 102 aa11.17□□□□□ -0.62
RXRB-202ENST00000374685 DNAH8Q96JB1 4490 aa11.17□□□□□ -0.62
RXRB-202ENST00000374685 H0Y9J4 135 aa11.17□□□□□ -0.62
RXRB-202ENST00000374685 NDUFB1O75438 58 aa11.17□□□□□ -0.62
RXRB-202ENST00000374685 PRR4Q16378 134 aa11.16□□□□□ -0.62
RXRB-202ENST00000374685 HYDINQ4G0P3 5121 aa11.15□□□□□ -0.62
RXRB-202ENST00000374685 KRTAP13-1Q8IUC0 172 aa11.15□□□□□ -0.62
RXRB-202ENST00000374685 KRTAP10-2P60368 255 aa11.14□□□□□ -0.63
RXRB-202ENST00000374685 DNAH11Q96DT5 4516 aa11.13□□□□□ -0.63
RXRB-202ENST00000374685 WFDC13Q8IUB5 93 aa11.12□□□□□ -0.63
RXRB-202ENST00000374685 LIMD2Q9BT23 127 aa11.12□□□□□ -0.63
RXRB-202ENST00000374685 IGLV8-61A0A075B6I0 122 aa11.11□□□□□ -0.63
RXRB-202ENST00000374685 CHKB-CPT1BH3BT56 60 aa11.11□□□□□ -0.63
RXRB-202ENST00000374685 Q8N9P0 234 aaPredicted RBP11.11□□□□□ -0.63
RXRB-202ENST00000374685 WWC2-AS2Q96NR7 200 aa11.11□□□□□ -0.63
RXRB-202ENST00000374685 SPRR1BP22528 89 aa11.1□□□□□ -0.63
RXRB-202ENST00000374685 ATP11AUNQ6ZP68 121 aa11.09□□□□□ -0.63
RXRB-202ENST00000374685 NDUFS5O43920 106 aa11.09□□□□□ -0.63
RXRB-202ENST00000374685 PLAC8Q9NZF1 115 aa11.08□□□□□ -0.63
RXRB-202ENST00000374685 MOBPQ13875 183 aa11.07□□□□□ -0.64
RXRB-202ENST00000374685 HCG22E2RYF7 251 aa11.06□□□□□ -0.64
RXRB-202ENST00000374685 DNAH5Q8TE73 4624 aa11.06□□□□□ -0.64
RXRB-202ENST00000374685 SPANXA2-OT1Q8N9U9 137 aa11.05□□□□□ -0.64
RXRB-202ENST00000374685 A6NN06 94 aa11.04□□□□□ -0.64
RXRB-202ENST00000374685 LCA10Q71F78 164 aa11.04□□□□□ -0.64
RXRB-202ENST00000374685 ZNF861PO60384 105 aa11.03□□□□□ -0.64
RXRB-202ENST00000374685 CIRBP-AS1Q8TBR5 109 aa11.03□□□□□ -0.64
RXRB-202ENST00000374685 LINC00208Q96KT6 92 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms