RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 LINC00336Q6ZUF6 198 aa11.26□□□□□ -0.61
PHF1-201ENST00000374512 UBE2DNLQ8IWF7 75 aa11.25□□□□□ -0.61
PHF1-201ENST00000374512 IGKV2-24A0A0C4DH68 120 aa11.25□□□□□ -0.61
PHF1-201ENST00000374512 DNAH9Q9NYC9 4486 aa11.25□□□□□ -0.61
PHF1-201ENST00000374512 SPRR1BP22528 89 aa11.24□□□□□ -0.61
PHF1-201ENST00000374512 B9D2Q9BPU9 175 aa11.24□□□□□ -0.61
PHF1-201ENST00000374512 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.23□□□□□ -0.61
PHF1-201ENST00000374512 UBE2AP49459 152 aa11.23□□□□□ -0.61
PHF1-201ENST00000374512 FAM229BQ4G0N7 80 aa11.23□□□□□ -0.61
PHF1-201ENST00000374512 PKIGQ9Y2B9 76 aa11.23□□□□□ -0.61
PHF1-201ENST00000374512 A0A087WSZ3 146 aa11.23□□□□□ -0.61
PHF1-201ENST00000374512 NDUFB1O75438 58 aa11.22□□□□□ -0.61
PHF1-201ENST00000374512 APLNQ9ULZ1 77 aa11.22□□□□□ -0.61
PHF1-201ENST00000374512 hDV103S1A0JD37 113 aa11.21□□□□□ -0.61
PHF1-201ENST00000374512 A0A0G2JQZ4 141 aa11.19□□□□□ -0.62
PHF1-201ENST00000374512 CYP4F30PQ9H0H9 118 aa11.19□□□□□ -0.62
PHF1-201ENST00000374512 STAB2Q8WWQ8 2551 aa11.18□□□□□ -0.62
PHF1-201ENST00000374512 MP68P56378 58 aa11.17□□□□□ -0.62
PHF1-201ENST00000374512 COL7A1Q02388 2944 aa11.17□□□□□ -0.62
PHF1-201ENST00000374512 KRTAP29-1A8MX34 341 aaPredicted RBP11.16□□□□□ -0.62
PHF1-201ENST00000374512 MPLKIPQ8TAP9 179 aa11.15□□□□□ -0.62
PHF1-201ENST00000374512 DEFB116Q30KQ4 102 aa11.15□□□□□ -0.63
PHF1-201ENST00000374512 DYNC2H1Q8NCM8 4307 aaKnown RBP11.14□□□□□ -0.63
PHF1-201ENST00000374512 H3BPC8 53 aa11.14□□□□□ -0.63
PHF1-201ENST00000374512 PHF5AQ7RTV0 110 aaKnown RBP11.14□□□□□ -0.63
PHF1-201ENST00000374512 WFDC13Q8IUB5 93 aa11.14□□□□□ -0.63
PHF1-201ENST00000374512 C1orf64Q8NEQ6 169 aa11.14□□□□□ -0.63
PHF1-201ENST00000374512 PRR15Q8IV56 129 aa11.13□□□□□ -0.63
PHF1-201ENST00000374512 C9orf163Q8N9P6 203 aa11.13□□□□□ -0.63
PHF1-201ENST00000374512 A8MWP4 228 aa11.12□□□□□ -0.63
PHF1-201ENST00000374512 DNAH10Q8IVF4 4471 aa11.11□□□□□ -0.63
PHF1-201ENST00000374512 LINC00472Q9H8W2 130 aa11.11□□□□□ -0.63
PHF1-201ENST00000374512 Q1T7F1 81 aa11.11□□□□□ -0.63
PHF1-201ENST00000374512 KRTAP11-1Q8IUC1 163 aa11.11□□□□□ -0.63
PHF1-201ENST00000374512 LYSTQ99698 3801 aa11.1□□□□□ -0.63
PHF1-201ENST00000374512 CHTF8P0CG12 524 aa11.1□□□□□ -0.63
PHF1-201ENST00000374512 CASC2Q6XLA1 102 aa11.1□□□□□ -0.63
PHF1-201ENST00000374512 TRAV22A0A0B4J277 110 aa11.09□□□□□ -0.63
PHF1-201ENST00000374512 NUPR2A6NF83 97 aa11.08□□□□□ -0.64
PHF1-201ENST00000374512 RPL37AP61513 92 aaKnown RBP11.08□□□□□ -0.64
PHF1-201ENST00000374512 NBDYA0A0U1RRE5 68 aa11.07□□□□□ -0.64
PHF1-201ENST00000374512 LRCOL1A6NCL2 159 aa11.07□□□□□ -0.64
PHF1-201ENST00000374512 SPANXA2-OT1Q8N9U9 137 aa11.06□□□□□ -0.64
PHF1-201ENST00000374512 BRK1Q8WUW1 75 aa11.05□□□□□ -0.64
PHF1-201ENST00000374512 LINC00208Q96KT6 92 aa11.05□□□□□ -0.64
PHF1-201ENST00000374512 KRTAP13-1Q8IUC0 172 aa11.04□□□□□ -0.64
PHF1-201ENST00000374512 H0Y9P7 68 aa11.03□□□□□ -0.64
PHF1-201ENST00000374512 PLECQ15149 4684 aaKnown RBP11.01□□□□□ -0.65
PHF1-201ENST00000374512 Q6ZRN7 208 aaPredicted RBP11□□□□□ -0.65
PHF1-201ENST00000374512 V9GYY9 64 aa10.99□□□□□ -0.65
PHF1-201ENST00000374512 CSMD3Q7Z407 3707 aa10.99□□□□□ -0.65
PHF1-201ENST00000374512 PRR4Q16378 134 aa10.96□□□□□ -0.65
PHF1-201ENST00000374512 DNAH7Q8WXX0 4024 aa10.96□□□□□ -0.65
PHF1-201ENST00000374512 DNHD1Q96M86 4753 aa10.96□□□□□ -0.66
PHF1-201ENST00000374512 MMP24-AS1A0A0U1RRL7 71 aa10.96□□□□□ -0.66
PHF1-201ENST00000374512 PANO1I0J062 215 aa10.94□□□□□ -0.66
PHF1-201ENST00000374512 LINC00483Q53H64 154 aa10.93□□□□□ -0.66
PHF1-201ENST00000374512 SPACA4Q8TDM5 124 aa10.93□□□□□ -0.66
PHF1-201ENST00000374512 TP53AIP1Q9HCN2 124 aa10.92□□□□□ -0.66
PHF1-201ENST00000374512 TENM2Q9NT68 2774 aa10.92□□□□□ -0.66
PHF1-201ENST00000374512 SRRM2Q9UQ35 2752 aaKnown RBP10.92□□□□□ -0.66
PHF1-201ENST00000374512 MOBPQ13875 183 aa10.91□□□□□ -0.66
PHF1-201ENST00000374512 ASB16-AS1Q495Z4 193 aa10.91□□□□□ -0.66
PHF1-201ENST00000374512 ZNF706Q9Y5V0 76 aaPredicted RBP10.9□□□□□ -0.66
PHF1-201ENST00000374512 Q96NJ1 140 aa10.89□□□□□ -0.67
PHF1-201ENST00000374512 VPS13DQ5THJ4 4388 aa10.89□□□□□ -0.67
PHF1-201ENST00000374512 STARD9Q9P2P6 4700 aa10.88□□□□□ -0.67
PHF1-201ENST00000374512 PRKDCP78527 4128 aaKnown RBP10.88□□□□□ -0.67
PHF1-201ENST00000374512 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.88□□□□□ -0.67
PHF1-201ENST00000374512 IGLV9-49A0A0B4J1Y8 123 aa10.86□□□□□ -0.67
PHF1-201ENST00000374512 C1orf195Q5TG92 126 aa10.86□□□□□ -0.67
PHF1-201ENST00000374512 A0A087WTM6 91 aa10.85□□□□□ -0.67
PHF1-201ENST00000374512 KRTAP21-3Q3LHN1 58 aa10.85□□□□□ -0.67
PHF1-201ENST00000374512 IGLV7-46A0A075B6I9 117 aa10.84□□□□□ -0.67
PHF1-201ENST00000374512 PSPHP1O15172 72 aa10.84□□□□□ -0.67
PHF1-201ENST00000374512 LIMD2Q9BT23 127 aa10.83□□□□□ -0.68
PHF1-201ENST00000374512 C8orf17Q9NRJ1 99 aa10.82□□□□□ -0.68
PHF1-201ENST00000374512 Q6ZR54 194 aa10.81□□□□□ -0.68
PHF1-201ENST00000374512 WWC2-AS2Q96NR7 200 aa10.8□□□□□ -0.68
PHF1-201ENST00000374512 A0A1B0GVX0 72 aa10.8□□□□□ -0.68
PHF1-201ENST00000374512 Q8N9P0 234 aaPredicted RBP10.79□□□□□ -0.68
PHF1-201ENST00000374512 IGLV5-52A0A0A0MRZ9 124 aa10.78□□□□□ -0.68
PHF1-201ENST00000374512 RTL8CO15255 209 aa10.78□□□□□ -0.68
PHF1-201ENST00000374512 A8MUN3 132 aa10.77□□□□□ -0.68
PHF1-201ENST00000374512 CDK2AP2O75956 126 aa10.77□□□□□ -0.68
PHF1-201ENST00000374512 PSORS1C2Q9UIG4 136 aa10.76□□□□□ -0.69
PHF1-201ENST00000374512 ZNF861PO60384 105 aa10.76□□□□□ -0.69
PHF1-201ENST00000374512 PLAC8Q9NZF1 115 aa10.76□□□□□ -0.69
PHF1-201ENST00000374512 Q5VV11 94 aa10.74□□□□□ -0.69
PHF1-201ENST00000374512 COA5Q86WW8 74 aa10.74□□□□□ -0.69
PHF1-201ENST00000374512 IGHV6-1A0A0B4J1U7 121 aa10.73□□□□□ -0.69
PHF1-201ENST00000374512 MRPL34Q9BQ48 92 aaKnown RBP10.73□□□□□ -0.69
PHF1-201ENST00000374512 MEGF8Q7Z7M0 2845 aa10.71□□□□□ -0.69
PHF1-201ENST00000374512 CD164Q04900 197 aa10.7□□□□□ -0.7
PHF1-201ENST00000374512 NDUFS5O43920 106 aa10.69□□□□□ -0.7
PHF1-201ENST00000374512 PCOTHQ58A44 107 aa10.68□□□□□ -0.7
PHF1-201ENST00000374512 LOC101927531A0A1B0GV80 90 aa10.67□□□□□ -0.7
PHF1-201ENST00000374512 DNAH17Q9UFH2 4485 aa10.67□□□□□ -0.7
PHF1-201ENST00000374512 KMT2AQ03164 3969 aa10.67□□□□□ -0.7
PHF1-201ENST00000374512 C1orf134Q5TEV5 83 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms