RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 LY6G6CO95867 125 aa8.81□□□□□ -1
HMGCL-203ENST00000374490 ATP5EP56381 51 aaPredicted RBP8.81□□□□□ -1
HMGCL-203ENST00000374490 IGLV8-61A0A075B6I0 122 aa8.8□□□□□ -1
HMGCL-203ENST00000374490 SMIM29Q86T20 159 aa8.8□□□□□ -1
HMGCL-203ENST00000374490 Q8N9L7 120 aa8.8□□□□□ -1
HMGCL-203ENST00000374490 SERP1Q9Y6X1 66 aa8.8□□□□□ -1
HMGCL-203ENST00000374490 IGKV2-24A0A0C4DH68 120 aa8.79□□□□□ -1
HMGCL-203ENST00000374490 TMEM254Q8TBM7 123 aa8.79□□□□□ -1
HMGCL-203ENST00000374490 OCR1Q9BZK8 76 aa8.79□□□□□ -1
HMGCL-203ENST00000374490 ALMS1Q8TCU4 4167 aa8.78□□□□□ -1
HMGCL-203ENST00000374490 A0A1W2PNN7 141 aa8.78□□□□□ -1
HMGCL-203ENST00000374490 H0Y9J4 135 aa8.78□□□□□ -1
HMGCL-203ENST00000374490 SNURFQ9Y675 71 aa8.78□□□□□ -1
HMGCL-203ENST00000374490 LINC00474Q9P2X8 69 aa8.76□□□□□ -1.01
HMGCL-203ENST00000374490 A0A0U1RQV1 116 aa8.74□□□□□ -1.01
HMGCL-203ENST00000374490 NBDYA0A0U1RRE5 68 aa8.74□□□□□ -1.01
HMGCL-203ENST00000374490 EPM2AB3EWF7 344 aa8.74□□□□□ -1.01
HMGCL-203ENST00000374490 SPRR1BP22528 89 aa8.74□□□□□ -1.01
HMGCL-203ENST00000374490 PRLHP81277 87 aa8.74□□□□□ -1.01
HMGCL-203ENST00000374490 IGFL1Q6UW32 110 aa8.74□□□□□ -1.01
HMGCL-203ENST00000374490 OXTP01178 125 aa8.73□□□□□ -1.01
HMGCL-203ENST00000374490 UBE2AP49459 152 aa8.73□□□□□ -1.01
HMGCL-203ENST00000374490 C9orf163Q8N9P6 203 aa8.73□□□□□ -1.01
HMGCL-203ENST00000374490 HIGD2AQ9BW72 106 aa8.73□□□□□ -1.01
HMGCL-203ENST00000374490 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.72□□□□□ -1.01
HMGCL-203ENST00000374490 DSCR10P59022 87 aa8.72□□□□□ -1.01
HMGCL-203ENST00000374490 LRCOL1A6NCL2 159 aa8.7□□□□□ -1.02
HMGCL-203ENST00000374490 KRTAP17-1Q9BYP8 105 aa8.7□□□□□ -1.02
HMGCL-203ENST00000374490 PHF5AQ7RTV0 110 aaKnown RBP8.69□□□□□ -1.02
HMGCL-203ENST00000374490 K7EQZ3 153 aa8.68□□□□□ -1.02
HMGCL-203ENST00000374490 HERC2O95714 4834 aa8.67□□□□□ -1.02
HMGCL-203ENST00000374490 HCG22E2RYF7 251 aa8.67□□□□□ -1.02
HMGCL-203ENST00000374490 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
HMGCL-203ENST00000374490 FAM30AQ9NZY2 134 aa8.66□□□□□ -1.02
HMGCL-203ENST00000374490 A0A087WSZ3 146 aa8.65□□□□□ -1.02
HMGCL-203ENST00000374490 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.02
HMGCL-203ENST00000374490 SMIM26A0A096LP01 95 aa8.64□□□□□ -1.03
HMGCL-203ENST00000374490 C5orf47Q569G3 176 aa8.63□□□□□ -1.03
HMGCL-203ENST00000374490 Q5XG85 94 aa8.63□□□□□ -1.03
HMGCL-203ENST00000374490 KRTAP11-1Q8IUC1 163 aa8.63□□□□□ -1.03
HMGCL-203ENST00000374490 A0A0G2JQZ4 141 aa8.6□□□□□ -1.03
HMGCL-203ENST00000374490 KRTAP13-1Q8IUC0 172 aa8.6□□□□□ -1.03
HMGCL-203ENST00000374490 KMT2AQ03164 3969 aa8.6□□□□□ -1.03
HMGCL-203ENST00000374490 FRAS1Q86XX4 4008 aa8.59□□□□□ -1.03
HMGCL-203ENST00000374490 Q6ZR54 194 aa8.59□□□□□ -1.03
HMGCL-203ENST00000374490 SPACA4Q8TDM5 124 aa8.59□□□□□ -1.03
HMGCL-203ENST00000374490 DNAH10Q8IVF4 4471 aa8.58□□□□□ -1.04
HMGCL-203ENST00000374490 ZCCHC13Q8WW36 166 aaKnown RBP8.58□□□□□ -1.04
HMGCL-203ENST00000374490 RPL37AP61513 92 aaKnown RBP8.58□□□□□ -1.04
HMGCL-203ENST00000374490 A8MWP4 228 aa8.56□□□□□ -1.04
HMGCL-203ENST00000374490 PRR15Q8IV56 129 aa8.56□□□□□ -1.04
HMGCL-203ENST00000374490 PCLOQ9Y6V0 5065 aa8.56□□□□□ -1.04
HMGCL-203ENST00000374490 KIAA1109Q2LD37 5005 aa8.55□□□□□ -1.04
HMGCL-203ENST00000374490 C4orf26Q17RF5 130 aa8.55□□□□□ -1.04
HMGCL-203ENST00000374490 C1orf134Q5TEV5 83 aa8.55□□□□□ -1.04
HMGCL-203ENST00000374490 LINC00472Q9H8W2 130 aa8.55□□□□□ -1.04
HMGCL-203ENST00000374490 ZNF706Q9Y5V0 76 aaPredicted RBP8.55□□□□□ -1.04
HMGCL-203ENST00000374490 A0A087WTM6 91 aa8.54□□□□□ -1.04
HMGCL-203ENST00000374490 KRTAP29-1A8MX34 341 aaPredicted RBP8.54□□□□□ -1.04
HMGCL-203ENST00000374490 LINC00336Q6ZUF6 198 aa8.54□□□□□ -1.04
HMGCL-203ENST00000374490 H3BPC8 53 aa8.54□□□□□ -1.04
HMGCL-203ENST00000374490 PANO1I0J062 215 aa8.54□□□□□ -1.04
HMGCL-203ENST00000374490 NDUFB1O75438 58 aa8.54□□□□□ -1.04
HMGCL-203ENST00000374490 MP68P56378 58 aa8.54□□□□□ -1.04
HMGCL-203ENST00000374490 DEFB116Q30KQ4 102 aa8.54□□□□□ -1.04
HMGCL-203ENST00000374490 WFDC13Q8IUB5 93 aa8.54□□□□□ -1.04
HMGCL-203ENST00000374490 LINC00483Q53H64 154 aa8.52□□□□□ -1.05
HMGCL-203ENST00000374490 HRCT1Q6UXD1 115 aa8.52□□□□□ -1.05
HMGCL-203ENST00000374490 CASC2Q6XLA1 102 aa8.52□□□□□ -1.05
HMGCL-203ENST00000374490 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.52□□□□□ -1.05
HMGCL-203ENST00000374490 VPS13DQ5THJ4 4388 aa8.52□□□□□ -1.05
HMGCL-203ENST00000374490 HECTD4Q9Y4D8 3996 aa8.5□□□□□ -1.05
HMGCL-203ENST00000374490 FP248Q71RG6 208 aaPredicted RBP8.5□□□□□ -1.05
HMGCL-203ENST00000374490 RTL8CO15255 209 aa8.49□□□□□ -1.05
HMGCL-203ENST00000374490 CYP4F30PQ9H0H9 118 aa8.47□□□□□ -1.05
HMGCL-203ENST00000374490 PLAC8Q9NZF1 115 aa8.47□□□□□ -1.05
HMGCL-203ENST00000374490 IGLV5-52A0A0A0MRZ9 124 aa8.46□□□□□ -1.06
HMGCL-203ENST00000374490 hDV103S1A0JD37 113 aa8.46□□□□□ -1.06
HMGCL-203ENST00000374490 A0A1B0GVY2 172 aa8.45□□□□□ -1.06
HMGCL-203ENST00000374490 DNAH6Q9C0G6 4158 aa8.45□□□□□ -1.06
HMGCL-203ENST00000374490 IGLV9-49A0A0B4J1Y8 123 aa8.44□□□□□ -1.06
HMGCL-203ENST00000374490 TRAV22A0A0B4J277 110 aa8.44□□□□□ -1.06
HMGCL-203ENST00000374490 MMP24-AS1A0A0U1RRL7 71 aa8.43□□□□□ -1.06
HMGCL-203ENST00000374490 H0Y9P7 68 aa8.43□□□□□ -1.06
HMGCL-203ENST00000374490 MOBPQ13875 183 aa8.43□□□□□ -1.06
HMGCL-203ENST00000374490 PSORS1C2Q9UIG4 136 aa8.43□□□□□ -1.06
HMGCL-203ENST00000374490 ZNF861PO60384 105 aa8.42□□□□□ -1.06
HMGCL-203ENST00000374490 RYR1P21817 5038 aa8.42□□□□□ -1.06
HMGCL-203ENST00000374490 SPANXA2-OT1Q8N9U9 137 aa8.41□□□□□ -1.06
HMGCL-203ENST00000374490 LINC00208Q96KT6 92 aa8.41□□□□□ -1.06
HMGCL-203ENST00000374490 FAT2Q9NYQ8 4349 aa8.41□□□□□ -1.06
HMGCL-203ENST00000374490 DNAH2Q9P225 4427 aa8.41□□□□□ -1.06
HMGCL-203ENST00000374490 DNAH11Q96DT5 4516 aa8.41□□□□□ -1.06
HMGCL-203ENST00000374490 FAM229BQ4G0N7 80 aa8.4□□□□□ -1.06
HMGCL-203ENST00000374490 DYNC1H1Q14204 4646 aaKnown RBP8.4□□□□□ -1.06
HMGCL-203ENST00000374490 Q96NJ1 140 aa8.4□□□□□ -1.07
HMGCL-203ENST00000374490 TP53AIP1Q9HCN2 124 aa8.4□□□□□ -1.07
HMGCL-203ENST00000374490 C1orf64Q8NEQ6 169 aa8.39□□□□□ -1.07
HMGCL-203ENST00000374490 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
HMGCL-203ENST00000374490 CDK2AP2O75956 126 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms