RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 CHTF8P0CG12 524 aa10.53□□□□□ -0.72
PCIF1-201ENST00000372409 ATP5EP56381 51 aaPredicted RBP10.52□□□□□ -0.72
PCIF1-201ENST00000372409 CNBPP62633 177 aaKnown RBP10.52□□□□□ -0.73
PCIF1-201ENST00000372409 PHF5AQ7RTV0 110 aaKnown RBP10.5□□□□□ -0.73
PCIF1-201ENST00000372409 DNAH9Q9NYC9 4486 aa10.49□□□□□ -0.73
PCIF1-201ENST00000372409 A0A087WSZ3 146 aa10.49□□□□□ -0.73
PCIF1-201ENST00000372409 UBE2AP49459 152 aa10.49□□□□□ -0.73
PCIF1-201ENST00000372409 SMIM26A0A096LP01 95 aa10.48□□□□□ -0.73
PCIF1-201ENST00000372409 KRTAP11-1Q8IUC1 163 aa10.47□□□□□ -0.73
PCIF1-201ENST00000372409 LINC00474Q9P2X8 69 aa10.46□□□□□ -0.73
PCIF1-201ENST00000372409 HCG22E2RYF7 251 aa10.46□□□□□ -0.74
PCIF1-201ENST00000372409 FP248Q71RG6 208 aaPredicted RBP10.46□□□□□ -0.74
PCIF1-201ENST00000372409 APLNQ9ULZ1 77 aa10.45□□□□□ -0.74
PCIF1-201ENST00000372409 C14orf177Q52M58 125 aa10.44□□□□□ -0.74
PCIF1-201ENST00000372409 WFDC13Q8IUB5 93 aa10.43□□□□□ -0.74
PCIF1-201ENST00000372409 RPL37AP61513 92 aaKnown RBP10.42□□□□□ -0.74
PCIF1-201ENST00000372409 IGLV8-61A0A075B6I0 122 aa10.41□□□□□ -0.74
PCIF1-201ENST00000372409 FAM229BQ4G0N7 80 aa10.41□□□□□ -0.74
PCIF1-201ENST00000372409 LCE6AA0A183 80 aa10.4□□□□□ -0.75
PCIF1-201ENST00000372409 C9orf163Q8N9P6 203 aa10.37□□□□□ -0.75
PCIF1-201ENST00000372409 MPLKIPQ8TAP9 179 aa10.37□□□□□ -0.75
PCIF1-201ENST00000372409 B9D2Q9BPU9 175 aa10.35□□□□□ -0.75
PCIF1-201ENST00000372409 LRCOL1A6NCL2 159 aa10.34□□□□□ -0.75
PCIF1-201ENST00000372409 H0Y9J4 135 aa10.34□□□□□ -0.75
PCIF1-201ENST00000372409 PANO1I0J062 215 aa10.34□□□□□ -0.75
PCIF1-201ENST00000372409 ZCCHC13Q8WW36 166 aaKnown RBP10.34□□□□□ -0.75
PCIF1-201ENST00000372409 NBDYA0A0U1RRE5 68 aa10.33□□□□□ -0.76
PCIF1-201ENST00000372409 LINC00336Q6ZUF6 198 aa10.33□□□□□ -0.76
PCIF1-201ENST00000372409 SPRR1BP22528 89 aa10.32□□□□□ -0.76
PCIF1-201ENST00000372409 PRR4Q16378 134 aa10.32□□□□□ -0.76
PCIF1-201ENST00000372409 MDFIQ99750 246 aa10.31□□□□□ -0.76
PCIF1-201ENST00000372409 PLECQ15149 4684 aaKnown RBP10.31□□□□□ -0.76
PCIF1-201ENST00000372409 MP68P56378 58 aa10.29□□□□□ -0.76
PCIF1-201ENST00000372409 CASC2Q6XLA1 102 aa10.29□□□□□ -0.76
PCIF1-201ENST00000372409 PKIGQ9Y2B9 76 aa10.28□□□□□ -0.76
PCIF1-201ENST00000372409 PRR15Q8IV56 129 aa10.27□□□□□ -0.77
PCIF1-201ENST00000372409 C1orf64Q8NEQ6 169 aa10.27□□□□□ -0.77
PCIF1-201ENST00000372409 LINC00208Q96KT6 92 aa10.27□□□□□ -0.77
PCIF1-201ENST00000372409 hDV103S1A0JD37 113 aa10.26□□□□□ -0.77
PCIF1-201ENST00000372409 IGLV9-49A0A0B4J1Y8 123 aa10.26□□□□□ -0.77
PCIF1-201ENST00000372409 A8MWP4 228 aa10.26□□□□□ -0.77
PCIF1-201ENST00000372409 KRTAP29-1A8MX34 341 aaPredicted RBP10.26□□□□□ -0.77
PCIF1-201ENST00000372409 LINC00472Q9H8W2 130 aa10.26□□□□□ -0.77
PCIF1-201ENST00000372409 Q6ZRN7 208 aaPredicted RBP10.25□□□□□ -0.77
PCIF1-201ENST00000372409 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.25□□□□□ -0.77
PCIF1-201ENST00000372409 NUPR2A6NF83 97 aa10.24□□□□□ -0.77
PCIF1-201ENST00000372409 H0Y9P7 68 aa10.22□□□□□ -0.77
PCIF1-201ENST00000372409 KRTAP13-1Q8IUC0 172 aa10.22□□□□□ -0.77
PCIF1-201ENST00000372409 NDUFB1O75438 58 aa10.21□□□□□ -0.77
PCIF1-201ENST00000372409 DYNC2H1Q8NCM8 4307 aaKnown RBP10.21□□□□□ -0.78
PCIF1-201ENST00000372409 STARD9Q9P2P6 4700 aa10.2□□□□□ -0.78
PCIF1-201ENST00000372409 TRAV22A0A0B4J277 110 aa10.2□□□□□ -0.78
PCIF1-201ENST00000372409 PRO0628Q9UI54 55 aa10.2□□□□□ -0.78
PCIF1-201ENST00000372409 SPACA4Q8TDM5 124 aa10.2□□□□□ -0.78
PCIF1-201ENST00000372409 BRK1Q8WUW1 75 aa10.2□□□□□ -0.78
PCIF1-201ENST00000372409 PRKDCP78527 4128 aaKnown RBP10.19□□□□□ -0.78
PCIF1-201ENST00000372409 TGP01266 2768 aa10.19□□□□□ -0.78
PCIF1-201ENST00000372409 MEGF8Q7Z7M0 2845 aa10.18□□□□□ -0.78
PCIF1-201ENST00000372409 CYP4F30PQ9H0H9 118 aa10.16□□□□□ -0.78
PCIF1-201ENST00000372409 KMT2AQ03164 3969 aa10.16□□□□□ -0.78
PCIF1-201ENST00000372409 A0A087WTM6 91 aa10.14□□□□□ -0.79
PCIF1-201ENST00000372409 MMP24-AS1A0A0U1RRL7 71 aa10.14□□□□□ -0.79
PCIF1-201ENST00000372409 RTL8CO15255 209 aa10.11□□□□□ -0.79
PCIF1-201ENST00000372409 ANAPC11Q9NYG5 84 aa10.11□□□□□ -0.79
PCIF1-201ENST00000372409 DNHD1Q96M86 4753 aa10.11□□□□□ -0.79
PCIF1-201ENST00000372409 PSORS1C2Q9UIG4 136 aa10.11□□□□□ -0.79
PCIF1-201ENST00000372409 H3BPC8 53 aa10.1□□□□□ -0.79
PCIF1-201ENST00000372409 FRAS1Q86XX4 4008 aa10.1□□□□□ -0.79
PCIF1-201ENST00000372409 MOBPQ13875 183 aa10.1□□□□□ -0.79
PCIF1-201ENST00000372409 Q96NJ1 140 aa10.1□□□□□ -0.79
PCIF1-201ENST00000372409 Q1T7F1 81 aa10.07□□□□□ -0.8
PCIF1-201ENST00000372409 ZNF706Q9Y5V0 76 aaPredicted RBP10.07□□□□□ -0.8
PCIF1-201ENST00000372409 PSPHP1O15172 72 aa10.07□□□□□ -0.8
PCIF1-201ENST00000372409 LINC00483Q53H64 154 aa10.07□□□□□ -0.8
PCIF1-201ENST00000372409 IGLV5-52A0A0A0MRZ9 124 aa10.06□□□□□ -0.8
PCIF1-201ENST00000372409 IGHV6-1A0A0B4J1U7 121 aa10.06□□□□□ -0.8
PCIF1-201ENST00000372409 WWC2-AS2Q96NR7 200 aa10.06□□□□□ -0.8
PCIF1-201ENST00000372409 NDUFS5O43920 106 aa10.04□□□□□ -0.8
PCIF1-201ENST00000372409 SPANXA2-OT1Q8N9U9 137 aa10.04□□□□□ -0.8
PCIF1-201ENST00000372409 VPS13DQ5THJ4 4388 aa10.03□□□□□ -0.8
PCIF1-201ENST00000372409 CDK2AP2O75956 126 aa10.03□□□□□ -0.8
PCIF1-201ENST00000372409 C8orf17Q9NRJ1 99 aa10.03□□□□□ -0.8
PCIF1-201ENST00000372409 ZNF861PO60384 105 aa10.02□□□□□ -0.81
PCIF1-201ENST00000372409 PCOTHQ58A44 107 aa10.01□□□□□ -0.81
PCIF1-201ENST00000372409 HECTD4Q9Y4D8 3996 aa10.01□□□□□ -0.81
PCIF1-201ENST00000372409 DNAH2Q9P225 4427 aa10.01□□□□□ -0.81
PCIF1-201ENST00000372409 FBN3Q75N90 2809 aa10.01□□□□□ -0.81
PCIF1-201ENST00000372409 PLAC8Q9NZF1 115 aa10□□□□□ -0.81
PCIF1-201ENST00000372409 A0A1B0GVX0 72 aa9.99□□□□□ -0.81
PCIF1-201ENST00000372409 TP53AIP1Q9HCN2 124 aa9.98□□□□□ -0.81
PCIF1-201ENST00000372409 Q6ZR54 194 aa9.97□□□□□ -0.81
PCIF1-201ENST00000372409 ASB16-AS1Q495Z4 193 aa9.97□□□□□ -0.81
PCIF1-201ENST00000372409 A8MUN3 132 aa9.96□□□□□ -0.82
PCIF1-201ENST00000372409 SPINK6Q6UWN8 80 aa9.96□□□□□ -0.82
PCIF1-201ENST00000372409 DNAH8Q96JB1 4490 aa9.95□□□□□ -0.82
PCIF1-201ENST00000372409 A0A087X002 238 aa9.94□□□□□ -0.82
PCIF1-201ENST00000372409 C1orf134Q5TEV5 83 aa9.94□□□□□ -0.82
PCIF1-201ENST00000372409 NOTCH2NLQ7Z3S9 236 aa9.94□□□□□ -0.82
PCIF1-201ENST00000372409 V9GYY9 64 aa9.94□□□□□ -0.82
PCIF1-201ENST00000372409 MRPL34Q9BQ48 92 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms