RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 F8WEM9 126 aa7.42□□□□□ -1.22
PDE6C-201ENST00000371447 KRTAP4-16G5E9R7 235 aaPredicted RBP7.42□□□□□ -1.22
PDE6C-201ENST00000371447 PRKDCP78527 4128 aaKnown RBP7.42□□□□□ -1.22
PDE6C-201ENST00000371447 H3BQ85 93 aa7.42□□□□□ -1.22
PDE6C-201ENST00000371447 UBE2AP49459 152 aa7.42□□□□□ -1.22
PDE6C-201ENST00000371447 LRCOL1A6NCL2 159 aa7.4□□□□□ -1.23
PDE6C-201ENST00000371447 PLA2G2DQ9UNK4 145 aa7.4□□□□□ -1.23
PDE6C-201ENST00000371447 EPM2AB3EWF7 344 aa7.39□□□□□ -1.23
PDE6C-201ENST00000371447 SPRR1AP35321 89 aa7.39□□□□□ -1.23
PDE6C-201ENST00000371447 LINC00476Q8WZB0 136 aa7.39□□□□□ -1.23
PDE6C-201ENST00000371447 STARD9Q9P2P6 4700 aa7.39□□□□□ -1.23
PDE6C-201ENST00000371447 NUPR2A6NF83 97 aa7.39□□□□□ -1.23
PDE6C-201ENST00000371447 LY6G6CO95867 125 aa7.37□□□□□ -1.23
PDE6C-201ENST00000371447 RBM12B-AS1Q9P1G2 102 aa7.37□□□□□ -1.23
PDE6C-201ENST00000371447 FBN3Q75N90 2809 aa7.37□□□□□ -1.23
PDE6C-201ENST00000371447 IGLV5-37A0A075B6J1 123 aa7.37□□□□□ -1.23
PDE6C-201ENST00000371447 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.37□□□□□ -1.23
PDE6C-201ENST00000371447 A0A087WSZ3 146 aa7.37□□□□□ -1.23
PDE6C-201ENST00000371447 CNBPP62633 177 aaKnown RBP7.37□□□□□ -1.23
PDE6C-201ENST00000371447 CXCL6P80162 114 aa7.36□□□□□ -1.23
PDE6C-201ENST00000371447 C14orf177Q52M58 125 aa7.36□□□□□ -1.23
PDE6C-201ENST00000371447 IGLV5-48A0A075B6I7 105 aa7.35□□□□□ -1.23
PDE6C-201ENST00000371447 DNAH1Q9P2D7 4330 aa7.35□□□□□ -1.23
PDE6C-201ENST00000371447 C9orf163Q8N9P6 203 aa7.35□□□□□ -1.23
PDE6C-201ENST00000371447 FAM30AQ9NZY2 134 aa7.35□□□□□ -1.23
PDE6C-201ENST00000371447 IGLV9-49A0A0B4J1Y8 123 aa7.35□□□□□ -1.23
PDE6C-201ENST00000371447 ANAPC11Q9NYG5 84 aa7.34□□□□□ -1.23
PDE6C-201ENST00000371447 RPL37AP61513 92 aaKnown RBP7.34□□□□□ -1.23
PDE6C-201ENST00000371447 IGFL1Q6UW32 110 aa7.34□□□□□ -1.23
PDE6C-201ENST00000371447 SMIM29Q86T20 159 aa7.34□□□□□ -1.23
PDE6C-201ENST00000371447 Q8NBF4 154 aa7.34□□□□□ -1.23
PDE6C-201ENST00000371447 SPTSSBQ8NFR3 76 aa7.34□□□□□ -1.24
PDE6C-201ENST00000371447 IGKV4-1P06312 121 aa7.33□□□□□ -1.24
PDE6C-201ENST00000371447 KMT2AQ03164 3969 aa7.33□□□□□ -1.24
PDE6C-201ENST00000371447 H7BZZ5 65 aa7.33□□□□□ -1.24
PDE6C-201ENST00000371447 PSPHP1O15172 72 aa7.32□□□□□ -1.24
PDE6C-201ENST00000371447 K7EQZ3 153 aa7.32□□□□□ -1.24
PDE6C-201ENST00000371447 WFDC13Q8IUB5 93 aa7.32□□□□□ -1.24
PDE6C-201ENST00000371447 TRAV7A0A075B6U4 112 aa7.3□□□□□ -1.24
PDE6C-201ENST00000371447 FAM229BQ4G0N7 80 aa7.3□□□□□ -1.24
PDE6C-201ENST00000371447 TNP2Q05952 138 aa7.3□□□□□ -1.24
PDE6C-201ENST00000371447 Q6ZRN7 208 aaPredicted RBP7.3□□□□□ -1.24
PDE6C-201ENST00000371447 A0A087WTM6 91 aa7.29□□□□□ -1.24
PDE6C-201ENST00000371447 RTL8CO15255 209 aa7.28□□□□□ -1.24
PDE6C-201ENST00000371447 PRR15Q8IV56 129 aa7.27□□□□□ -1.25
PDE6C-201ENST00000371447 DSCR10P59022 87 aa7.26□□□□□ -1.25
PDE6C-201ENST00000371447 IGLV5-52A0A0A0MRZ9 124 aa7.25□□□□□ -1.25
PDE6C-201ENST00000371447 TMEM254Q8TBM7 123 aa7.24□□□□□ -1.25
PDE6C-201ENST00000371447 H0Y9J4 135 aa7.23□□□□□ -1.25
PDE6C-201ENST00000371447 PRR4Q16378 134 aa7.23□□□□□ -1.25
PDE6C-201ENST00000371447 C1orf134Q5TEV5 83 aa7.23□□□□□ -1.25
PDE6C-201ENST00000371447 BCE1O60756 84 aa7.23□□□□□ -1.25
PDE6C-201ENST00000371447 SPRR4Q96PI1 79 aa7.22□□□□□ -1.25
PDE6C-201ENST00000371447 PSORS1C2Q9UIG4 136 aa7.22□□□□□ -1.25
PDE6C-201ENST00000371447 SPACA4Q8TDM5 124 aa7.21□□□□□ -1.25
PDE6C-201ENST00000371447 FRAS1Q86XX4 4008 aa7.2□□□□□ -1.26
PDE6C-201ENST00000371447 A8MU10 97 aa7.19□□□□□ -1.26
PDE6C-201ENST00000371447 C8orf87E5RJ46 101 aa7.19□□□□□ -1.26
PDE6C-201ENST00000371447 MOBPQ13875 183 aa7.19□□□□□ -1.26
PDE6C-201ENST00000371447 KTN1-AS1Q86SY8 53 aa7.19□□□□□ -1.26
PDE6C-201ENST00000371447 OCR1Q9BZK8 76 aa7.18□□□□□ -1.26
PDE6C-201ENST00000371447 HCG22E2RYF7 251 aa7.17□□□□□ -1.26
PDE6C-201ENST00000371447 SPINK6Q6UWN8 80 aa7.17□□□□□ -1.26
PDE6C-201ENST00000371447 PRR26Q8N8Z3 221 aa7.16□□□□□ -1.26
PDE6C-201ENST00000371447 VPS13DQ5THJ4 4388 aa7.16□□□□□ -1.26
PDE6C-201ENST00000371447 KRTAP10-2P60368 255 aa7.16□□□□□ -1.26
PDE6C-201ENST00000371447 DNAH2Q9P225 4427 aa7.15□□□□□ -1.26
PDE6C-201ENST00000371447 KLKP1Q107X0 134 aa7.15□□□□□ -1.27
PDE6C-201ENST00000371447 Q6ZR54 194 aa7.15□□□□□ -1.27
PDE6C-201ENST00000371447 CIRBP-AS1Q8TBR5 109 aa7.12□□□□□ -1.27
PDE6C-201ENST00000371447 CASC2Q6XLA1 102 aa7.11□□□□□ -1.27
PDE6C-201ENST00000371447 NDUFC1O43677 76 aa7.11□□□□□ -1.27
PDE6C-201ENST00000371447 NDUFS5O43920 106 aa7.11□□□□□ -1.27
PDE6C-201ENST00000371447 DNAH6Q9C0G6 4158 aa7.1□□□□□ -1.27
PDE6C-201ENST00000371447 IGHV6-1A0A0B4J1U7 121 aa7.1□□□□□ -1.27
PDE6C-201ENST00000371447 A8MUN3 132 aa7.1□□□□□ -1.27
PDE6C-201ENST00000371447 ATP5EP56381 51 aaPredicted RBP7.1□□□□□ -1.27
PDE6C-201ENST00000371447 KRTAP13-1Q8IUC0 172 aa7.1□□□□□ -1.27
PDE6C-201ENST00000371447 DYNC2H1Q8NCM8 4307 aaKnown RBP7.1□□□□□ -1.27
PDE6C-201ENST00000371447 CHKB-CPT1BH3BT56 60 aa7.1□□□□□ -1.27
PDE6C-201ENST00000371447 LINC00208Q96KT6 92 aa7.1□□□□□ -1.27
PDE6C-201ENST00000371447 HECTD4Q9Y4D8 3996 aa7.1□□□□□ -1.27
PDE6C-201ENST00000371447 IGLV8-61A0A075B6I0 122 aa7.09□□□□□ -1.27
PDE6C-201ENST00000371447 A0A1B0GW54 56 aa7.09□□□□□ -1.27
PDE6C-201ENST00000371447 ZNF861PO60384 105 aa7.08□□□□□ -1.28
PDE6C-201ENST00000371447 DNAH11Q96DT5 4516 aa7.08□□□□□ -1.28
PDE6C-201ENST00000371447 SPRR1BP22528 89 aa7.07□□□□□ -1.28
PDE6C-201ENST00000371447 HYDINQ4G0P3 5121 aa7.07□□□□□ -1.28
PDE6C-201ENST00000371447 LINC00472Q9H8W2 130 aa7.06□□□□□ -1.28
PDE6C-201ENST00000371447 NDUFB1O75438 58 aa7.06□□□□□ -1.28
PDE6C-201ENST00000371447 PLAC8Q9NZF1 115 aa7.06□□□□□ -1.28
PDE6C-201ENST00000371447 DNAH17Q9UFH2 4485 aa7.05□□□□□ -1.28
PDE6C-201ENST00000371447 A8MWP4 228 aa7.05□□□□□ -1.28
PDE6C-201ENST00000371447 CDK2AP2O75956 126 aa7.05□□□□□ -1.28
PDE6C-201ENST00000371447 TRAV22A0A0B4J277 110 aa7.05□□□□□ -1.28
PDE6C-201ENST00000371447 WWC2-AS2Q96NR7 200 aa7.05□□□□□ -1.28
PDE6C-201ENST00000371447 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
PDE6C-201ENST00000371447 MP68P56378 58 aa7.03□□□□□ -1.28
PDE6C-201ENST00000371447 KRTAP10-1P60331 282 aa7.03□□□□□ -1.28
PDE6C-201ENST00000371447 ZNF706Q9Y5V0 76 aaPredicted RBP7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms