RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 H3BUA1 57 aa3.29□□□□□ -1.88
UBE3D-202ENST00000369746 LCE3BQ5TA77 95 aa3.29□□□□□ -1.88
UBE3D-202ENST00000369746 BRD3OSQ6XYD6 125 aa3.29□□□□□ -1.88
UBE3D-202ENST00000369746 Q6ZTI0 123 aa3.29□□□□□ -1.88
UBE3D-202ENST00000369746 DNAH11Q96DT5 4516 aa3.29□□□□□ -1.88
UBE3D-202ENST00000369746 MIR22HGQ0VDD5 57 aa3.29□□□□□ -1.88
UBE3D-202ENST00000369746 PRR9Q5T870 116 aa3.29□□□□□ -1.88
UBE3D-202ENST00000369746 CHCHD7Q9BUK0 85 aa3.29□□□□□ -1.88
UBE3D-202ENST00000369746 ZANQ9Y493 2812 aa3.29□□□□□ -1.88
UBE3D-202ENST00000369746 IGLV8-61A0A075B6I0 122 aa3.28□□□□□ -1.88
UBE3D-202ENST00000369746 IGHV3-73A0A0B4J1V6 119 aa3.28□□□□□ -1.88
UBE3D-202ENST00000369746 K7ERS5 55 aa3.28□□□□□ -1.88
UBE3D-202ENST00000369746 PRB2P02812 416 aaPredicted RBP3.28□□□□□ -1.88
UBE3D-202ENST00000369746 KCNQ1DNQ9H478 68 aa3.28□□□□□ -1.88
UBE3D-202ENST00000369746 XAGE1AQ9HD64 81 aa3.28□□□□□ -1.88
UBE3D-202ENST00000369746 KMT2AQ03164 3969 aa3.28□□□□□ -1.88
UBE3D-202ENST00000369746 TENM1Q9UKZ4 2725 aa3.28□□□□□ -1.88
UBE3D-202ENST00000369746 HUWE1Q7Z6Z7 4374 aaKnown RBP3.28□□□□□ -1.88
UBE3D-202ENST00000369746 COX7BP24311 80 aa3.28□□□□□ -1.88
UBE3D-202ENST00000369746 CCL18P55774 89 aa3.28□□□□□ -1.88
UBE3D-202ENST00000369746 CSAG1Q6PB30 78 aa3.28□□□□□ -1.88
UBE3D-202ENST00000369746 DPM3Q9P2X0 92 aa3.28□□□□□ -1.88
UBE3D-202ENST00000369746 PLECQ15149 4684 aaKnown RBP3.28□□□□□ -1.89
UBE3D-202ENST00000369746 LRP1BQ9NZR2 4599 aa3.28□□□□□ -1.89
UBE3D-202ENST00000369746 TRGV2A0A075B6R0 118 aa3.28□□□□□ -1.89
UBE3D-202ENST00000369746 IGLV1-40P01703 118 aa3.28□□□□□ -1.89
UBE3D-202ENST00000369746 TLX1NBP0CAT3 122 aa3.28□□□□□ -1.89
UBE3D-202ENST00000369746 LINC00575Q6W349 94 aa3.28□□□□□ -1.89
UBE3D-202ENST00000369746 LINC00467Q9BRT7 94 aa3.28□□□□□ -1.89
UBE3D-202ENST00000369746 IGHV3-53P01767 116 aa3.27□□□□□ -1.89
UBE3D-202ENST00000369746 SLPIP03973 132 aa3.27□□□□□ -1.89
UBE3D-202ENST00000369746 C10orf25Q5T742 122 aa3.26□□□□□ -1.89
UBE3D-202ENST00000369746 LCE2AQ5TA79 106 aaPredicted RBP3.26□□□□□ -1.89
UBE3D-202ENST00000369746 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.26□□□□□ -1.89
UBE3D-202ENST00000369746 NDUFA4O00483 81 aa3.26□□□□□ -1.89
UBE3D-202ENST00000369746 LCE2BO14633 110 aa3.26□□□□□ -1.89
UBE3D-202ENST00000369746 RTL8CO15255 209 aa3.26□□□□□ -1.89
UBE3D-202ENST00000369746 IGLV1-47P01700 117 aa3.26□□□□□ -1.89
UBE3D-202ENST00000369746 Q8NAQ8 132 aa3.26□□□□□ -1.89
UBE3D-202ENST00000369746 COX7B2Q8TF08 81 aa3.26□□□□□ -1.89
UBE3D-202ENST00000369746 IGLV4-60A0A075B6I1 120 aa3.25□□□□□ -1.89
UBE3D-202ENST00000369746 Q6ZR54 194 aa3.25□□□□□ -1.89
UBE3D-202ENST00000369746 Q8NBF4 154 aa3.25□□□□□ -1.89
UBE3D-202ENST00000369746 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.25□□□□□ -1.89
UBE3D-202ENST00000369746 IGHV3-23P01764 117 aa3.25□□□□□ -1.89
UBE3D-202ENST00000369746 A0A1B0GVX0 72 aa3.24□□□□□ -1.89
UBE3D-202ENST00000369746 WNK1Q9H4A3 2382 aa3.24□□□□□ -1.89
UBE3D-202ENST00000369746 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
UBE3D-202ENST00000369746 A8MUU9 505 aa3.24□□□□□ -1.89
UBE3D-202ENST00000369746 LY6G6CO95867 125 aa3.24□□□□□ -1.89
UBE3D-202ENST00000369746 COX17Q14061 63 aa3.24□□□□□ -1.89
UBE3D-202ENST00000369746 WFDC10AQ9H1F0 79 aa3.24□□□□□ -1.89
UBE3D-202ENST00000369746 IGHV3-66A0A0C4DH42 116 aa3.23□□□□□ -1.89
UBE3D-202ENST00000369746 COX6A2Q02221 97 aa3.23□□□□□ -1.89
UBE3D-202ENST00000369746 C20orf166-AS1Q96NR2 134 aa3.23□□□□□ -1.89
UBE3D-202ENST00000369746 DNAH2Q9P225 4427 aa3.23□□□□□ -1.89
UBE3D-202ENST00000369746 TENM3Q9P273 2699 aa3.23□□□□□ -1.89
UBE3D-202ENST00000369746 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.23□□□□□ -1.89
UBE3D-202ENST00000369746 PKHD1P08F94 4074 aa3.23□□□□□ -1.89
UBE3D-202ENST00000369746 LINC00158P58513 81 aa3.22□□□□□ -1.89
UBE3D-202ENST00000369746 KIAA1109Q2LD37 5005 aa3.22□□□□□ -1.89
UBE3D-202ENST00000369746 PLCE1Q9P212 2302 aa3.22□□□□□ -1.89
UBE3D-202ENST00000369746 IGHV3-64DA0A0J9YX35 117 aa3.22□□□□□ -1.89
UBE3D-202ENST00000369746 C5orf56Q8N8D9 126 aa3.22□□□□□ -1.89
UBE3D-202ENST00000369746 M0R2N4 97 aa3.21□□□□□ -1.89
UBE3D-202ENST00000369746 DNAH10OSP0CZ25 163 aa3.21□□□□□ -1.89
UBE3D-202ENST00000369746 SMIM29Q86T20 159 aa3.21□□□□□ -1.89
UBE3D-202ENST00000369746 Q8N9W7 124 aa3.21□□□□□ -1.89
UBE3D-202ENST00000369746 APLNQ9ULZ1 77 aa3.21□□□□□ -1.89
UBE3D-202ENST00000369746 LINC00612Q8N6U2 182 aa3.21□□□□□ -1.9
UBE3D-202ENST00000369746 VPS13BQ7Z7G8 4022 aa3.21□□□□□ -1.9
UBE3D-202ENST00000369746 IGLV7-46A0A075B6I9 117 aa3.21□□□□□ -1.9
UBE3D-202ENST00000369746 CCL3L1P16619 93 aa3.21□□□□□ -1.9
UBE3D-202ENST00000369746 IGHV3OR16-8A0A075B7F1 116 aa3.2□□□□□ -1.9
UBE3D-202ENST00000369746 A0A1W2PNM2 257 aa3.2□□□□□ -1.9
UBE3D-202ENST00000369746 INSP01308 110 aa3.2□□□□□ -1.9
UBE3D-202ENST00000369746 SPAG11BQ08648 103 aa3.2□□□□□ -1.9
UBE3D-202ENST00000369746 C9orf163Q8N9P6 203 aa3.2□□□□□ -1.9
UBE3D-202ENST00000369746 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
UBE3D-202ENST00000369746 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
UBE3D-202ENST00000369746 RYR1P21817 5038 aa3.2□□□□□ -1.9
UBE3D-202ENST00000369746 COA5Q86WW8 74 aa3.19□□□□□ -1.9
UBE3D-202ENST00000369746 H0Y9P7 68 aa3.19□□□□□ -1.9
UBE3D-202ENST00000369746 APELAP0DMC3 54 aa3.19□□□□□ -1.9
UBE3D-202ENST00000369746 NBEAL2Q6ZNJ1 2754 aa3.19□□□□□ -1.9
UBE3D-202ENST00000369746 LINC00483Q53H64 154 aa3.18□□□□□ -1.9
UBE3D-202ENST00000369746 Q8IZM0 81 aa3.18□□□□□ -1.9
UBE3D-202ENST00000369746 VPS13DQ5THJ4 4388 aa3.18□□□□□ -1.9
UBE3D-202ENST00000369746 IGLV6-57P01721 117 aa3.17□□□□□ -1.9
UBE3D-202ENST00000369746 SPATA8Q6RVD6 105 aa3.17□□□□□ -1.9
UBE3D-202ENST00000369746 Q6ZQY7 126 aa3.17□□□□□ -1.9
UBE3D-202ENST00000369746 C15orf56Q8N910 161 aa3.17□□□□□ -1.9
UBE3D-202ENST00000369746 LY6EQ16553 131 aa3.17□□□□□ -1.9
UBE3D-202ENST00000369746 USMG5Q96IX5 58 aa3.17□□□□□ -1.9
UBE3D-202ENST00000369746 IGLV1-50A0A075B6I6 118 aa3.16□□□□□ -1.9
UBE3D-202ENST00000369746 A8MTW9 85 aa3.16□□□□□ -1.9
UBE3D-202ENST00000369746 SPINK7P58062 85 aa3.16□□□□□ -1.9
UBE3D-202ENST00000369746 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
UBE3D-202ENST00000369746 NOTCH3Q9UM47 2321 aa3.16□□□□□ -1.9
UBE3D-202ENST00000369746 IGLV5-48A0A075B6I7 105 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms