RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 hDV103S1A0JD37 113 aa3.38□□□□□ -1.87
SMNDC1-202ENST00000369603 SPRR1AP35321 89 aa3.38□□□□□ -1.87
SMNDC1-202ENST00000369603 H3BPC8 53 aa3.38□□□□□ -1.87
SMNDC1-202ENST00000369603 DCHS1Q96JQ0 3298 aa3.38□□□□□ -1.87
SMNDC1-202ENST00000369603 NIPBLQ6KC79 2804 aaeCLIP3.38□□□□□ -1.87
SMNDC1-202ENST00000369603 A8MWP4 228 aa3.37□□□□□ -1.87
SMNDC1-202ENST00000369603 SSBP3-AS1Q7Z2R9 100 aa3.37□□□□□ -1.87
SMNDC1-202ENST00000369603 A0A1W2PNM2 257 aa3.36□□□□□ -1.87
SMNDC1-202ENST00000369603 PCOTHQ58A44 107 aa3.36□□□□□ -1.87
SMNDC1-202ENST00000369603 SPRR4Q96PI1 79 aa3.36□□□□□ -1.87
SMNDC1-202ENST00000369603 PSORS1C2Q9UIG4 136 aa3.36□□□□□ -1.87
SMNDC1-202ENST00000369603 NF1P21359 2839 aa3.36□□□□□ -1.87
SMNDC1-202ENST00000369603 MXRA5Q9NR99 2828 aa3.36□□□□□ -1.87
SMNDC1-202ENST00000369603 K7EQZ3 153 aa3.35□□□□□ -1.87
SMNDC1-202ENST00000369603 FP248Q71RG6 208 aaPredicted RBP3.35□□□□□ -1.87
SMNDC1-202ENST00000369603 C1orf64Q8NEQ6 169 aa3.35□□□□□ -1.87
SMNDC1-202ENST00000369603 RELNP78509 3460 aa3.35□□□□□ -1.87
SMNDC1-202ENST00000369603 IGLV7-43P04211 117 aa3.35□□□□□ -1.87
SMNDC1-202ENST00000369603 KRTAP1-5Q9BYS1 174 aa3.35□□□□□ -1.87
SMNDC1-202ENST00000369603 SPACA4Q8TDM5 124 aa3.35□□□□□ -1.87
SMNDC1-202ENST00000369603 FBN2P35556 2912 aa3.35□□□□□ -1.87
SMNDC1-202ENST00000369603 A8MUN3 132 aa3.35□□□□□ -1.87
SMNDC1-202ENST00000369603 PRR15Q8IV56 129 aa3.34□□□□□ -1.87
SMNDC1-202ENST00000369603 OCR1Q9BZK8 76 aa3.34□□□□□ -1.87
SMNDC1-202ENST00000369603 LAMA5O15230 3695 aa3.34□□□□□ -1.87
SMNDC1-202ENST00000369603 TYMSOSQ8TAI1 123 aa3.34□□□□□ -1.87
SMNDC1-202ENST00000369603 TRAV22A0A0B4J277 110 aa3.34□□□□□ -1.88
SMNDC1-202ENST00000369603 C8orf87E5RJ46 101 aa3.34□□□□□ -1.88
SMNDC1-202ENST00000369603 ASH1LQ9NR48 2969 aaKnown RBP3.34□□□□□ -1.88
SMNDC1-202ENST00000369603 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.33□□□□□ -1.88
SMNDC1-202ENST00000369603 FAM229AH3BQW9 127 aa3.33□□□□□ -1.88
SMNDC1-202ENST00000369603 TNP2Q05952 138 aa3.33□□□□□ -1.88
SMNDC1-202ENST00000369603 PLAC8Q9NZF1 115 aa3.33□□□□□ -1.88
SMNDC1-202ENST00000369603 PLA2G1BP04054 148 aaKnown RBP3.32□□□□□ -1.88
SMNDC1-202ENST00000369603 ZFHX4Q86UP3 3567 aa3.32□□□□□ -1.88
SMNDC1-202ENST00000369603 SPRR1BP22528 89 aa3.32□□□□□ -1.88
SMNDC1-202ENST00000369603 LINC00313P59037 77 aa3.32□□□□□ -1.88
SMNDC1-202ENST00000369603 FAM229BQ4G0N7 80 aa3.32□□□□□ -1.88
SMNDC1-202ENST00000369603 NBEAL1Q6ZS30 2694 aa3.31□□□□□ -1.88
SMNDC1-202ENST00000369603 ASPMQ8IZT6 3477 aa3.31□□□□□ -1.88
SMNDC1-202ENST00000369603 A0A0G2JQZ4 141 aa3.31□□□□□ -1.88
SMNDC1-202ENST00000369603 MRPL34Q9BQ48 92 aaKnown RBP3.31□□□□□ -1.88
SMNDC1-202ENST00000369603 IGLV8-61A0A075B6I0 122 aa3.31□□□□□ -1.88
SMNDC1-202ENST00000369603 A0A1B0GVX0 72 aa3.31□□□□□ -1.88
SMNDC1-202ENST00000369603 SPAG11AQ6PDA7 123 aa3.3□□□□□ -1.88
SMNDC1-202ENST00000369603 C8orf17Q9NRJ1 99 aa3.3□□□□□ -1.88
SMNDC1-202ENST00000369603 CD164Q04900 197 aa3.3□□□□□ -1.88
SMNDC1-202ENST00000369603 PDZD2O15018 2839 aa3.3□□□□□ -1.88
SMNDC1-202ENST00000369603 KRTAP4-16G5E9R7 235 aaPredicted RBP3.3□□□□□ -1.88
SMNDC1-202ENST00000369603 LOC101927531A0A1B0GV80 90 aa3.29□□□□□ -1.88
SMNDC1-202ENST00000369603 Q6ZR54 194 aa3.29□□□□□ -1.88
SMNDC1-202ENST00000369603 TENM4Q6N022 2769 aa3.28□□□□□ -1.88
SMNDC1-202ENST00000369603 DSCR10P59022 87 aa3.28□□□□□ -1.88
SMNDC1-202ENST00000369603 ANAPC11Q9NYG5 84 aa3.28□□□□□ -1.88
SMNDC1-202ENST00000369603 Q1T7F1 81 aa3.28□□□□□ -1.89
SMNDC1-202ENST00000369603 COA5Q86WW8 74 aa3.28□□□□□ -1.89
SMNDC1-202ENST00000369603 LINC00304Q8N9R0 145 aa3.27□□□□□ -1.89
SMNDC1-202ENST00000369603 RETNLBQ9BQ08 111 aa3.27□□□□□ -1.89
SMNDC1-202ENST00000369603 KRTAP21-3Q3LHN1 58 aa3.27□□□□□ -1.89
SMNDC1-202ENST00000369603 CYP4F30PQ9H0H9 118 aa3.27□□□□□ -1.89
SMNDC1-202ENST00000369603 IGKV2D-30A0A075B6S6 120 aa3.26□□□□□ -1.89
SMNDC1-202ENST00000369603 IGKV2-30P06310 120 aa3.26□□□□□ -1.89
SMNDC1-202ENST00000369603 SMG1Q96Q15 3661 aaKnown RBP3.26□□□□□ -1.89
SMNDC1-202ENST00000369603 SPINK1P00995 79 aa3.26□□□□□ -1.89
SMNDC1-202ENST00000369603 ACYP2P14621 99 aa3.26□□□□□ -1.89
SMNDC1-202ENST00000369603 STAB2Q8WWQ8 2551 aa3.26□□□□□ -1.89
SMNDC1-202ENST00000369603 Q6ZRN7 208 aaPredicted RBP3.26□□□□□ -1.89
SMNDC1-202ENST00000369603 CSMD1Q96PZ7 3565 aa3.26□□□□□ -1.89
SMNDC1-202ENST00000369603 H3BS24 57 aa3.25□□□□□ -1.89
SMNDC1-202ENST00000369603 Q96NJ1 140 aa3.25□□□□□ -1.89
SMNDC1-202ENST00000369603 SPANXA2-OT1Q8N9U9 137 aa3.24□□□□□ -1.89
SMNDC1-202ENST00000369603 LINC00483Q53H64 154 aa3.24□□□□□ -1.89
SMNDC1-202ENST00000369603 ATP11AUNQ6ZP68 121 aa3.24□□□□□ -1.89
SMNDC1-202ENST00000369603 SMR3BP02814 79 aaPredicted RBP3.23□□□□□ -1.89
SMNDC1-202ENST00000369603 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
SMNDC1-202ENST00000369603 LINC00472Q9H8W2 130 aa3.23□□□□□ -1.89
SMNDC1-202ENST00000369603 KRTAP7-1Q8IUC3 87 aa3.23□□□□□ -1.89
SMNDC1-202ENST00000369603 PANO1I0J062 215 aa3.22□□□□□ -1.89
SMNDC1-202ENST00000369603 C7orf65Q6ZTY9 151 aa3.22□□□□□ -1.89
SMNDC1-202ENST00000369603 BSNQ9UPA5 3926 aa3.22□□□□□ -1.89
SMNDC1-202ENST00000369603 LCE6AA0A183 80 aa3.22□□□□□ -1.89
SMNDC1-202ENST00000369603 A0A1B0GU69 56 aa3.21□□□□□ -1.9
SMNDC1-202ENST00000369603 KRTAP10-2P60368 255 aa3.21□□□□□ -1.9
SMNDC1-202ENST00000369603 MMP24-AS1A0A0U1RRL7 71 aa3.21□□□□□ -1.9
SMNDC1-202ENST00000369603 Q8N9P0 234 aaPredicted RBP3.21□□□□□ -1.9
SMNDC1-202ENST00000369603 OTOGQ6ZRI0 2925 aa3.2□□□□□ -1.9
SMNDC1-202ENST00000369603 K7ERS5 55 aa3.2□□□□□ -1.9
SMNDC1-202ENST00000369603 KRTAP10-1P60331 282 aa3.2□□□□□ -1.9
SMNDC1-202ENST00000369603 Q5VV11 94 aa3.2□□□□□ -1.9
SMNDC1-202ENST00000369603 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
SMNDC1-202ENST00000369603 CELSR1Q9NYQ6 3014 aa3.19□□□□□ -1.9
SMNDC1-202ENST00000369603 TENM1Q9UKZ4 2725 aa3.19□□□□□ -1.9
SMNDC1-202ENST00000369603 ZFHX3Q15911 3703 aa3.18□□□□□ -1.9
SMNDC1-202ENST00000369603 ZCCHC13Q8WW36 166 aaKnown RBP3.18□□□□□ -1.9
SMNDC1-202ENST00000369603 KRTAP13-1Q8IUC0 172 aa3.18□□□□□ -1.9
SMNDC1-202ENST00000369603 KRTAP11-1Q8IUC1 163 aa3.18□□□□□ -1.9
SMNDC1-202ENST00000369603 PRR26Q8N8Z3 221 aa3.18□□□□□ -1.9
SMNDC1-202ENST00000369603 Q75L30 129 aa3.17□□□□□ -1.9
SMNDC1-202ENST00000369603 IGLV7-46A0A075B6I9 117 aa3.17□□□□□ -1.9
SMNDC1-202ENST00000369603 RBM12B-AS1Q9P1G2 102 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms