RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 LINC00483Q53H64 154 aa14.42□□□□□ -0.1
SNX3-203ENST00000368979 LOC110117498A0A087WWA1 95 aa14.41□□□□□ -0.1
SNX3-203ENST00000368979 TRBV7-4A0A0J9YYF1 115 aa14.41□□□□□ -0.1
SNX3-203ENST00000368979 RPL37AP61513 92 aaKnown RBP14.41□□□□□ -0.1
SNX3-203ENST00000368979 SMR3BP02814 79 aaPredicted RBP14.41□□□□□ -0.1
SNX3-203ENST00000368979 DSCR8Q96T75 97 aa14.4□□□□□ -0.1
SNX3-203ENST00000368979 Q6ZQT0 140 aa14.39□□□□□ -0.11
SNX3-203ENST00000368979 F8WEM9 126 aa14.36□□□□□ -0.11
SNX3-203ENST00000368979 CCKP06307 115 aa14.36□□□□□ -0.11
SNX3-203ENST00000368979 CDK2AP2O75956 126 aa14.36□□□□□ -0.11
SNX3-203ENST00000368979 PDE6GP18545 87 aa14.36□□□□□ -0.11
SNX3-203ENST00000368979 KRTAP17-1Q9BYP8 105 aa14.36□□□□□ -0.11
SNX3-203ENST00000368979 SRRM2Q9UQ35 2752 aaKnown RBP14.35□□□□□ -0.11
SNX3-203ENST00000368979 IGLV8-61A0A075B6I0 122 aa14.35□□□□□ -0.11
SNX3-203ENST00000368979 FAM240AA0A1B0GVK7 77 aa14.34□□□□□ -0.11
SNX3-203ENST00000368979 KRTAP10-4P60372 401 aaPredicted RBP14.32□□□□□ -0.12
SNX3-203ENST00000368979 ACYP1P07311 99 aa14.29□□□□□ -0.12
SNX3-203ENST00000368979 C21orf62-AS1Q17RA5 79 aa14.29□□□□□ -0.12
SNX3-203ENST00000368979 ANAPC11Q9NYG5 84 aa14.29□□□□□ -0.12
SNX3-203ENST00000368979 VPS13BQ7Z7G8 4022 aa14.28□□□□□ -0.12
SNX3-203ENST00000368979 IGFL1Q6UW32 110 aa14.26□□□□□ -0.13
SNX3-203ENST00000368979 SPINK6Q6UWN8 80 aa14.26□□□□□ -0.13
SNX3-203ENST00000368979 HERC2O95714 4834 aa14.26□□□□□ -0.13
SNX3-203ENST00000368979 Q6JHZ5 121 aa14.24□□□□□ -0.13
SNX3-203ENST00000368979 IGLV9-49A0A0B4J1Y8 123 aa14.23□□□□□ -0.13
SNX3-203ENST00000368979 VPS25Q9BRG1 176 aa14.23□□□□□ -0.13
SNX3-203ENST00000368979 A0A1W2PNM2 257 aa14.22□□□□□ -0.13
SNX3-203ENST00000368979 CDIP1Q9H305 208 aa14.22□□□□□ -0.13
SNX3-203ENST00000368979 FAT1Q14517 4588 aa14.22□□□□□ -0.13
SNX3-203ENST00000368979 KRTAP1-4P0C5Y4 121 aa14.21□□□□□ -0.13
SNX3-203ENST00000368979 A0A0G2JQZ4 141 aa14.2□□□□□ -0.14
SNX3-203ENST00000368979 C9orf153Q5TBE3 101 aa14.2□□□□□ -0.14
SNX3-203ENST00000368979 Q8NBF4 154 aa14.2□□□□□ -0.14
SNX3-203ENST00000368979 LINC00846Q9NV44 126 aa14.19□□□□□ -0.14
SNX3-203ENST00000368979 FAM229AH3BQW9 127 aa14.18□□□□□ -0.14
SNX3-203ENST00000368979 FAM229BQ4G0N7 80 aa14.18□□□□□ -0.14
SNX3-203ENST00000368979 PLA2G1BP04054 148 aaKnown RBP14.17□□□□□ -0.14
SNX3-203ENST00000368979 MOBPQ13875 183 aa14.17□□□□□ -0.14
SNX3-203ENST00000368979 KIAA1109Q2LD37 5005 aa14.17□□□□□ -0.14
SNX3-203ENST00000368979 RYR1P21817 5038 aa14.15□□□□□ -0.14
SNX3-203ENST00000368979 HSPG2P98160 4391 aa14.15□□□□□ -0.14
SNX3-203ENST00000368979 A0A087X002 238 aa14.14□□□□□ -0.15
SNX3-203ENST00000368979 A0A1B0GW54 56 aa14.14□□□□□ -0.15
SNX3-203ENST00000368979 PCLOQ9Y6V0 5065 aa14.13□□□□□ -0.15
SNX3-203ENST00000368979 CRYGAP11844 174 aa14.12□□□□□ -0.15
SNX3-203ENST00000368979 Q5VSD8 79 aa14.12□□□□□ -0.15
SNX3-203ENST00000368979 Q6Q795 121 aa14.11□□□□□ -0.15
SNX3-203ENST00000368979 KRTAP13-2Q52LG2 175 aa14.1□□□□□ -0.15
SNX3-203ENST00000368979 SSBP3-AS1Q7Z2R9 100 aa14.07□□□□□ -0.16
SNX3-203ENST00000368979 UBL5Q9BZL1 73 aa14.05□□□□□ -0.16
SNX3-203ENST00000368979 LINC00643Q86TS7 51 aa14.04□□□□□ -0.16
SNX3-203ENST00000368979 Q6ZVQ6 151 aa14.03□□□□□ -0.16
SNX3-203ENST00000368979 Q8N1X5 172 aa14.01□□□□□ -0.17
SNX3-203ENST00000368979 A0A087WSZ3 146 aa14□□□□□ -0.17
SNX3-203ENST00000368979 TRBV7-7A0A0K0K1E9 115 aa14□□□□□ -0.17
SNX3-203ENST00000368979 PKHD1L1Q86WI1 4243 aa13.98□□□□□ -0.17
SNX3-203ENST00000368979 MT-ATP8P03928 68 aa13.97□□□□□ -0.17
SNX3-203ENST00000368979 CD164Q04900 197 aa13.96□□□□□ -0.17
SNX3-203ENST00000368979 NREPQ16612 68 aa13.96□□□□□ -0.17
SNX3-203ENST00000368979 HRCT1Q6UXD1 115 aa13.96□□□□□ -0.17
SNX3-203ENST00000368979 PRR26Q8N8Z3 221 aa13.95□□□□□ -0.18
SNX3-203ENST00000368979 TYMSOSQ8TAI1 123 aa13.95□□□□□ -0.18
SNX3-203ENST00000368979 SIGMAR1Q99720 223 aa13.94□□□□□ -0.18
SNX3-203ENST00000368979 ATP5EP2Q5VTU8 51 aa13.91□□□□□ -0.18
SNX3-203ENST00000368979 IGKV3D-7A0A0C4DH55 119 aa13.88□□□□□ -0.19
SNX3-203ENST00000368979 SS18L2Q9UHA2 77 aa13.86□□□□□ -0.19
SNX3-203ENST00000368979 CXCL6P80162 114 aa13.85□□□□□ -0.19
SNX3-203ENST00000368979 KRTAP4-5Q9BYR2 181 aa13.84□□□□□ -0.19
SNX3-203ENST00000368979 BPY2O14599 106 aa13.82□□□□□ -0.2
SNX3-203ENST00000368979 LINC00472Q9H8W2 130 aa13.82□□□□□ -0.2
SNX3-203ENST00000368979 ABCA13Q86UQ4 5058 aa13.82□□□□□ -0.2
SNX3-203ENST00000368979 IMUPQ9GZP8 106 aa13.8□□□□□ -0.2
SNX3-203ENST00000368979 LINC00304Q8N9R0 145 aa13.79□□□□□ -0.2
SNX3-203ENST00000368979 Q96NJ1 140 aa13.79□□□□□ -0.2
SNX3-203ENST00000368979 Q5XG85 94 aa13.78□□□□□ -0.2
SNX3-203ENST00000368979 C4orf48Q5BLP8 95 aa13.77□□□□□ -0.21
SNX3-203ENST00000368979 SPINK1P00995 79 aa13.76□□□□□ -0.21
SNX3-203ENST00000368979 DEFB116Q30KQ4 102 aa13.76□□□□□ -0.21
SNX3-203ENST00000368979 ASB16-AS1Q495Z4 193 aa13.75□□□□□ -0.21
SNX3-203ENST00000368979 SPAG11AQ6PDA7 123 aa13.75□□□□□ -0.21
SNX3-203ENST00000368979 DSCR10P59022 87 aa13.74□□□□□ -0.21
SNX3-203ENST00000368979 LIMD2Q9BT23 127 aa13.73□□□□□ -0.21
SNX3-203ENST00000368979 KRTAP10-8P60410 259 aa13.72□□□□□ -0.21
SNX3-203ENST00000368979 RPS29P62273 56 aaKnown RBP13.72□□□□□ -0.21
SNX3-203ENST00000368979 HIST1H4AP62805 103 aaKnown RBP13.7□□□□□ -0.22
SNX3-203ENST00000368979 J3KT08 172 aa13.69□□□□□ -0.22
SNX3-203ENST00000368979 Q8N9L7 120 aa13.69□□□□□ -0.22
SNX3-203ENST00000368979 A0A087WVE0 104 aa13.67□□□□□ -0.22
SNX3-203ENST00000368979 IGKV4-1P06312 121 aa13.67□□□□□ -0.22
SNX3-203ENST00000368979 LRP1Q07954 4544 aaKnown RBP13.66□□□□□ -0.22
SNX3-203ENST00000368979 FAT3Q8TDW7 4589 aa13.65□□□□□ -0.22
SNX3-203ENST00000368979 K7EQZ3 153 aa13.64□□□□□ -0.23
SNX3-203ENST00000368979 A8MWP4 228 aa13.63□□□□□ -0.23
SNX3-203ENST00000368979 C1orf195Q5TG92 126 aa13.62□□□□□ -0.23
SNX3-203ENST00000368979 SCGB1A1P11684 91 aa13.59□□□□□ -0.23
SNX3-203ENST00000368979 MT1HL1P0DM35 61 aa13.59□□□□□ -0.23
SNX3-203ENST00000368979 PRR15Q8IV56 129 aa13.58□□□□□ -0.24
SNX3-203ENST00000368979 TNXBP22105 4242 aa13.57□□□□□ -0.24
SNX3-203ENST00000368979 OXTP01178 125 aa13.56□□□□□ -0.24
SNX3-203ENST00000368979 FAM236AA0A1B0GUQ0 79 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms