RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 A0A1B0GWB2 263 aa5.52□□□□□ -1.53
CLRN3-201ENST00000368671 Q5XG85 94 aa5.52□□□□□ -1.53
CLRN3-201ENST00000368671 PET117Q6UWS5 81 aa5.52□□□□□ -1.53
CLRN3-201ENST00000368671 COX6B2Q6YFQ2 88 aa5.52□□□□□ -1.53
CLRN3-201ENST00000368671 SLC7A5P1Q8MH63 180 aa5.52□□□□□ -1.53
CLRN3-201ENST00000368671 TRBV7-6A0A0J9YX20 115 aa5.51□□□□□ -1.53
CLRN3-201ENST00000368671 A6NDN8 102 aa5.51□□□□□ -1.53
CLRN3-201ENST00000368671 SCGB1D4Q6XE38 83 aa5.51□□□□□ -1.53
CLRN3-201ENST00000368671 IGLV5-48A0A075B6I7 105 aa5.5□□□□□ -1.53
CLRN3-201ENST00000368671 HIST1H2BKO60814 126 aa5.49□□□□□ -1.53
CLRN3-201ENST00000368671 HIST1H2BJP06899 126 aa5.49□□□□□ -1.53
CLRN3-201ENST00000368671 C3orf79P0CE67 100 aa5.49□□□□□ -1.53
CLRN3-201ENST00000368671 HIST1H2BOP23527 126 aa5.49□□□□□ -1.53
CLRN3-201ENST00000368671 HIST1H2BBP33778 126 aa5.49□□□□□ -1.53
CLRN3-201ENST00000368671 HIST1H2BDP58876 126 aa5.49□□□□□ -1.53
CLRN3-201ENST00000368671 KRTDAPP60985 99 aa5.49□□□□□ -1.53
CLRN3-201ENST00000368671 HIST1H2BCP62807 126 aa5.49□□□□□ -1.53
CLRN3-201ENST00000368671 HIST2H2BEQ16778 126 aa5.49□□□□□ -1.53
CLRN3-201ENST00000368671 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.49□□□□□ -1.53
CLRN3-201ENST00000368671 HIST1H2BHQ93079 126 aa5.49□□□□□ -1.53
CLRN3-201ENST00000368671 HIST1H2BNQ99877 126 aa5.49□□□□□ -1.53
CLRN3-201ENST00000368671 HIST1H2BMQ99879 126 aa5.49□□□□□ -1.53
CLRN3-201ENST00000368671 COPS9Q8WXC6 57 aa5.48□□□□□ -1.53
CLRN3-201ENST00000368671 TCL1BO95988 128 aa5.47□□□□□ -1.53
CLRN3-201ENST00000368671 IFITM1P13164 125 aa5.47□□□□□ -1.53
CLRN3-201ENST00000368671 MUSTN1Q8IVN3 82 aa5.47□□□□□ -1.53
CLRN3-201ENST00000368671 NHP2Q9NX24 153 aaKnown RBP5.47□□□□□ -1.53
CLRN3-201ENST00000368671 C20orf202A1L168 122 aa5.46□□□□□ -1.54
CLRN3-201ENST00000368671 A4D1N5 150 aa5.46□□□□□ -1.54
CLRN3-201ENST00000368671 SMIM11BQ8TCY0 68 aa5.46□□□□□ -1.54
CLRN3-201ENST00000368671 F8WEM9 126 aa5.45□□□□□ -1.54
CLRN3-201ENST00000368671 ATOH7Q8N100 152 aa5.45□□□□□ -1.54
CLRN3-201ENST00000368671 TRAV13-2A0A0B4J235 113 aa5.44□□□□□ -1.54
CLRN3-201ENST00000368671 Q6ZVH6 145 aa5.44□□□□□ -1.54
CLRN3-201ENST00000368671 PCP2Q8IVA1 136 aa5.44□□□□□ -1.54
CLRN3-201ENST00000368671 Q6Q795 121 aa5.43□□□□□ -1.54
CLRN3-201ENST00000368671 FLGP20930 4061 aaPredicted RBP5.4□□□□□ -1.54
CLRN3-201ENST00000368671 TRBV7-7A0A0K0K1E9 115 aa5.4□□□□□ -1.54
CLRN3-201ENST00000368671 VAMP3Q15836 100 aa5.4□□□□□ -1.54
CLRN3-201ENST00000368671 IGFL1Q6UW32 110 aa5.4□□□□□ -1.54
CLRN3-201ENST00000368671 LINC00575Q6W349 94 aa5.4□□□□□ -1.54
CLRN3-201ENST00000368671 Q6ZQY7 126 aa5.4□□□□□ -1.54
CLRN3-201ENST00000368671 OBSCN-AS1Q96MR7 158 aa5.4□□□□□ -1.54
CLRN3-201ENST00000368671 hADV29S1A0JD25 119 aa5.39□□□□□ -1.55
CLRN3-201ENST00000368671 COA6Q5JTJ3 125 aaKnown RBP5.39□□□□□ -1.55
CLRN3-201ENST00000368671 Q6JHZ5 121 aa5.39□□□□□ -1.55
CLRN3-201ENST00000368671 ATP11AUNQ6ZP68 121 aa5.39□□□□□ -1.55
CLRN3-201ENST00000368671 CLEC2BQ92478 149 aa5.39□□□□□ -1.55
CLRN3-201ENST00000368671 OCIAD2Q56VL3 154 aa5.37□□□□□ -1.55
CLRN3-201ENST00000368671 Q75L30 129 aa5.37□□□□□ -1.55
CLRN3-201ENST00000368671 Q96NJ1 140 aa5.35□□□□□ -1.55
CLRN3-201ENST00000368671 LST1O00453 97 aa5.34□□□□□ -1.55
CLRN3-201ENST00000368671 SNRPEP62304 92 aaKnown RBP5.34□□□□□ -1.55
CLRN3-201ENST00000368671 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.34□□□□□ -1.55
CLRN3-201ENST00000368671 HSBP1L1C9JCN9 74 aa5.33□□□□□ -1.56
CLRN3-201ENST00000368671 H3BUT2 72 aa5.33□□□□□ -1.56
CLRN3-201ENST00000368671 C12orf57Q99622 126 aa5.33□□□□□ -1.56
CLRN3-201ENST00000368671 SNHG12Q9BXW3 62 aa5.33□□□□□ -1.56
CLRN3-201ENST00000368671 S100A2P29034 98 aa5.31□□□□□ -1.56
CLRN3-201ENST00000368671 BVES-AS1Q5T3Y7 98 aa5.31□□□□□ -1.56
CLRN3-201ENST00000368671 PPDPFLQ8WWR9 84 aa5.31□□□□□ -1.56
CLRN3-201ENST00000368671 SCGB1D1O95968 90 aa5.29□□□□□ -1.56
CLRN3-201ENST00000368671 CFC1P0CG37 223 aa5.29□□□□□ -1.56
CLRN3-201ENST00000368671 HIST1H4GQ99525 98 aa5.29□□□□□ -1.56
CLRN3-201ENST00000368671 SS18L2Q9UHA2 77 aa5.29□□□□□ -1.56
CLRN3-201ENST00000368671 TRBV20-1A0A075B6N2 111 aa5.28□□□□□ -1.56
CLRN3-201ENST00000368671 Q8N9P0 234 aaPredicted RBP5.28□□□□□ -1.56
CLRN3-201ENST00000368671 C20orf166-AS1Q96NR2 134 aa5.28□□□□□ -1.56
CLRN3-201ENST00000368671 KRTAP9-8Q9BYQ0 159 aa5.28□□□□□ -1.56
CLRN3-201ENST00000368671 A8MUU9 505 aa5.27□□□□□ -1.57
CLRN3-201ENST00000368671 HIST3H2BBQ8N257 126 aa5.27□□□□□ -1.57
CLRN3-201ENST00000368671 HIST1H2BLQ99880 126 aa5.27□□□□□ -1.57
CLRN3-201ENST00000368671 A0A087WSZ3 146 aa5.26□□□□□ -1.57
CLRN3-201ENST00000368671 DSCR10P59022 87 aa5.26□□□□□ -1.57
CLRN3-201ENST00000368671 TEN1Q86WV5 123 aa5.26□□□□□ -1.57
CLRN3-201ENST00000368671 SNCGO76070 127 aa5.25□□□□□ -1.57
CLRN3-201ENST00000368671 S100A6P06703 90 aa5.24□□□□□ -1.57
CLRN3-201ENST00000368671 NDUFV3P56181 108 aaKnown RBP5.24□□□□□ -1.57
CLRN3-201ENST00000368671 FAM236DA0A1B0GTK5 79 aa5.23□□□□□ -1.57
CLRN3-201ENST00000368671 FAM236CP0DP71 79 aa5.23□□□□□ -1.57
CLRN3-201ENST00000368671 RAB37Q96AX2 223 aa5.23□□□□□ -1.57
CLRN3-201ENST00000368671 USH2AO75445 5202 aa5.23□□□□□ -1.57
CLRN3-201ENST00000368671 FAM218AQ96MZ4 157 aa5.22□□□□□ -1.57
CLRN3-201ENST00000368671 SIGMAR1Q99720 223 aa5.22□□□□□ -1.57
CLRN3-201ENST00000368671 H0YGX0 51 aa5.21□□□□□ -1.58
CLRN3-201ENST00000368671 H3BMG7 143 aa5.21□□□□□ -1.58
CLRN3-201ENST00000368671 COX8AP10176 69 aa5.21□□□□□ -1.58
CLRN3-201ENST00000368671 SSPOA2VEC9 5147 aa5.2□□□□□ -1.58
CLRN3-201ENST00000368671 MT2AP02795 61 aa5.2□□□□□ -1.58
CLRN3-201ENST00000368671 FABP2P12104 132 aa5.2□□□□□ -1.58
CLRN3-201ENST00000368671 KRTAP16-1A8MUX0 517 aa5.19□□□□□ -1.58
CLRN3-201ENST00000368671 IGKV2-30P06310 120 aa5.19□□□□□ -1.58
CLRN3-201ENST00000368671 LINC00313P59037 77 aa5.19□□□□□ -1.58
CLRN3-201ENST00000368671 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
CLRN3-201ENST00000368671 A0A0B4J2C4 111 aa5.18□□□□□ -1.58
CLRN3-201ENST00000368671 A0A1W2PNM2 257 aa5.18□□□□□ -1.58
CLRN3-201ENST00000368671 DLEU1O43261 78 aa5.17□□□□□ -1.58
CLRN3-201ENST00000368671 IGKV4-1P06312 121 aa5.17□□□□□ -1.58
CLRN3-201ENST00000368671 C14orf144Q96I85 54 aa5.17□□□□□ -1.58
CLRN3-201ENST00000368671 RBM12B-AS1Q9P1G2 102 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms