RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 ETDCA0A1B0GVM5 59 aa6.2□□□□□ -1.42
TPM3-210ENST00000368530 PHF5AQ7RTV0 110 aaKnown RBP6.2□□□□□ -1.42
TPM3-210ENST00000368530 REG3GQ6UW15 175 aa6.18□□□□□ -1.42
TPM3-210ENST00000368530 LRP2P98164 4655 aa6.18□□□□□ -1.42
TPM3-210ENST00000368530 TNXBP22105 4242 aa6.18□□□□□ -1.42
TPM3-210ENST00000368530 B5MCH6 92 aa6.17□□□□□ -1.42
TPM3-210ENST00000368530 UBE2BP63146 152 aa6.17□□□□□ -1.42
TPM3-210ENST00000368530 LINC00474Q9P2X8 69 aa6.17□□□□□ -1.42
TPM3-210ENST00000368530 RNF213Q63HN8 5207 aa6.16□□□□□ -1.42
TPM3-210ENST00000368530 TMEM256-PLSCR3K7ERE1 68 aa6.16□□□□□ -1.42
TPM3-210ENST00000368530 SPRR1AP35321 89 aa6.16□□□□□ -1.42
TPM3-210ENST00000368530 Q6ZRX8 168 aa6.16□□□□□ -1.42
TPM3-210ENST00000368530 SPACA4Q8TDM5 124 aa6.16□□□□□ -1.42
TPM3-210ENST00000368530 KRTAP4-16G5E9R7 235 aaPredicted RBP6.15□□□□□ -1.42
TPM3-210ENST00000368530 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.15□□□□□ -1.42
TPM3-210ENST00000368530 KRTAP11-1Q8IUC1 163 aa6.15□□□□□ -1.42
TPM3-210ENST00000368530 C14orf132Q9NPU4 83 aa6.15□□□□□ -1.42
TPM3-210ENST00000368530 FAM19A1Q7Z5A9 133 aa6.15□□□□□ -1.43
TPM3-210ENST00000368530 DEFB105AQ8NG35 78 aa6.15□□□□□ -1.43
TPM3-210ENST00000368530 Q9BRP9 147 aa6.15□□□□□ -1.43
TPM3-210ENST00000368530 LAMTOR3Q9UHA4 124 aa6.15□□□□□ -1.43
TPM3-210ENST00000368530 DHRS4-AS1Q9P1J3 65 aa6.14□□□□□ -1.43
TPM3-210ENST00000368530 PRLHP81277 87 aa6.13□□□□□ -1.43
TPM3-210ENST00000368530 GAGE2AQ6NT46 116 aa6.13□□□□□ -1.43
TPM3-210ENST00000368530 OBSCN-AS1Q96MR7 158 aa6.13□□□□□ -1.43
TPM3-210ENST00000368530 ERC2-IT1O76042 136 aa6.12□□□□□ -1.43
TPM3-210ENST00000368530 ST20-AS1Q8NBB2 130 aa6.12□□□□□ -1.43
TPM3-210ENST00000368530 PLAC8Q9NZF1 115 aa6.11□□□□□ -1.43
TPM3-210ENST00000368530 JMJD7-PLA2G4BH0Y9G9 81 aa6.1□□□□□ -1.43
TPM3-210ENST00000368530 H3BQ85 93 aa6.1□□□□□ -1.43
TPM3-210ENST00000368530 SMCR5Q8TEV8 140 aa6.1□□□□□ -1.43
TPM3-210ENST00000368530 HIGD2AQ9BW72 106 aa6.1□□□□□ -1.43
TPM3-210ENST00000368530 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
TPM3-210ENST00000368530 NDUFV3P56181 108 aaKnown RBP6.09□□□□□ -1.44
TPM3-210ENST00000368530 LINC01547P58512 204 aaPredicted RBP6.09□□□□□ -1.44
TPM3-210ENST00000368530 RBM3P98179 157 aaKnown RBP6.09□□□□□ -1.44
TPM3-210ENST00000368530 Q8N377 158 aa6.09□□□□□ -1.44
TPM3-210ENST00000368530 UBE2AP49459 152 aa6.08□□□□□ -1.44
TPM3-210ENST00000368530 FAM240AA0A1B0GVK7 77 aa6.07□□□□□ -1.44
TPM3-210ENST00000368530 BCE1O60756 84 aa6.07□□□□□ -1.44
TPM3-210ENST00000368530 KRTAP10-8P60410 259 aa6.07□□□□□ -1.44
TPM3-210ENST00000368530 C3orf22Q8N5N4 141 aa6.07□□□□□ -1.44
TPM3-210ENST00000368530 CCKP06307 115 aa6.06□□□□□ -1.44
TPM3-210ENST00000368530 DSCR8Q96T75 97 aa6.06□□□□□ -1.44
TPM3-210ENST00000368530 SIGMAR1Q99720 223 aa6.06□□□□□ -1.44
TPM3-210ENST00000368530 MT-ATP8P03928 68 aa6.05□□□□□ -1.44
TPM3-210ENST00000368530 ACYP1P07311 99 aa6.05□□□□□ -1.44
TPM3-210ENST00000368530 IGLV5-48A0A075B6I7 105 aa6.04□□□□□ -1.44
TPM3-210ENST00000368530 Q6ZQT0 140 aa6.04□□□□□ -1.44
TPM3-210ENST00000368530 LOC110117498A0A087WWA1 95 aa6.04□□□□□ -1.44
TPM3-210ENST00000368530 PSORS1C2Q9UIG4 136 aa6.04□□□□□ -1.44
TPM3-210ENST00000368530 H0Y9J4 135 aa6.03□□□□□ -1.44
TPM3-210ENST00000368530 C1orf137Q5JT78 98 aa6.03□□□□□ -1.44
TPM3-210ENST00000368530 TRBV7-4A0A0J9YYF1 115 aa6.02□□□□□ -1.45
TPM3-210ENST00000368530 KRTAP13-1Q8IUC0 172 aa6.02□□□□□ -1.45
TPM3-210ENST00000368530 LINC00846Q9NV44 126 aa6.02□□□□□ -1.45
TPM3-210ENST00000368530 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
TPM3-210ENST00000368530 PDE6GP18545 87 aa6□□□□□ -1.45
TPM3-210ENST00000368530 SPINK6Q6UWN8 80 aa6□□□□□ -1.45
TPM3-210ENST00000368530 SMIM29Q86T20 159 aa6□□□□□ -1.45
TPM3-210ENST00000368530 F8WEM9 126 aa5.99□□□□□ -1.45
TPM3-210ENST00000368530 KRTAP9-2Q9BYQ4 174 aa5.99□□□□□ -1.45
TPM3-210ENST00000368530 KRTAP4-12Q9BQ66 201 aa5.99□□□□□ -1.45
TPM3-210ENST00000368530 LPAP08519 4548 aa5.99□□□□□ -1.45
TPM3-210ENST00000368530 LINC00643Q86TS7 51 aa5.98□□□□□ -1.45
TPM3-210ENST00000368530 A0A0G2JQZ4 141 aa5.97□□□□□ -1.45
TPM3-210ENST00000368530 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.97□□□□□ -1.45
TPM3-210ENST00000368530 IGKV3D-7A0A0C4DH55 119 aa5.96□□□□□ -1.46
TPM3-210ENST00000368530 ZNF861PO60384 105 aa5.96□□□□□ -1.46
TPM3-210ENST00000368530 KRTAP9-6A0A140TA67 174 aa5.95□□□□□ -1.46
TPM3-210ENST00000368530 IGLV7-43P04211 117 aa5.95□□□□□ -1.46
TPM3-210ENST00000368530 SPRR1BP22528 89 aa5.95□□□□□ -1.46
TPM3-210ENST00000368530 UBL5Q9BZL1 73 aa5.95□□□□□ -1.46
TPM3-210ENST00000368530 A0A1W2PNM2 257 aa5.94□□□□□ -1.46
TPM3-210ENST00000368530 SPRR4Q96PI1 79 aa5.94□□□□□ -1.46
TPM3-210ENST00000368530 Q6JHZ5 121 aa5.94□□□□□ -1.46
TPM3-210ENST00000368530 IGFL1Q6UW32 110 aa5.94□□□□□ -1.46
TPM3-210ENST00000368530 IGLV9-49A0A0B4J1Y8 123 aa5.93□□□□□ -1.46
TPM3-210ENST00000368530 Q6ZVQ6 151 aa5.93□□□□□ -1.46
TPM3-210ENST00000368530 ANAPC11Q9NYG5 84 aa5.93□□□□□ -1.46
TPM3-210ENST00000368530 ZNF706Q9Y5V0 76 aaPredicted RBP5.93□□□□□ -1.46
TPM3-210ENST00000368530 Q8NBF4 154 aa5.92□□□□□ -1.46
TPM3-210ENST00000368530 IGLV8-61A0A075B6I0 122 aa5.91□□□□□ -1.46
TPM3-210ENST00000368530 TRBV7-7A0A0K0K1E9 115 aa5.91□□□□□ -1.46
TPM3-210ENST00000368530 C9orf153Q5TBE3 101 aa5.91□□□□□ -1.46
TPM3-210ENST00000368530 SCGB1A1P11684 91 aa5.9□□□□□ -1.46
TPM3-210ENST00000368530 LINC00483Q53H64 154 aa5.9□□□□□ -1.46
TPM3-210ENST00000368530 PCP4P48539 62 aa5.89□□□□□ -1.47
TPM3-210ENST00000368530 MUC2Q02817 5179 aa5.89□□□□□ -1.47
TPM3-210ENST00000368530 NREPQ16612 68 aa5.89□□□□□ -1.47
TPM3-210ENST00000368530 Q6Q795 121 aa5.89□□□□□ -1.47
TPM3-210ENST00000368530 HIST1H4AP62805 103 aaKnown RBP5.88□□□□□ -1.47
TPM3-210ENST00000368530 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
TPM3-210ENST00000368530 ATP5EP2Q5VTU8 51 aa5.88□□□□□ -1.47
TPM3-210ENST00000368530 A0A087WVE0 104 aa5.87□□□□□ -1.47
TPM3-210ENST00000368530 CRYGAP11844 174 aa5.87□□□□□ -1.47
TPM3-210ENST00000368530 MOBPQ13875 183 aa5.87□□□□□ -1.47
TPM3-210ENST00000368530 PRR26Q8N8Z3 221 aa5.87□□□□□ -1.47
TPM3-210ENST00000368530 IMUPQ9GZP8 106 aa5.86□□□□□ -1.47
TPM3-210ENST00000368530 A0A087WSZ3 146 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms